Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B10:B29
Extra
PDB:
ATOM 1 O3' G A 9 -14.860 38.952 -12.117 1.00 30.62 O
ATOM 2 P G A 10 -14.712 37.358 -12.043 1.00 29.76 P
ATOM 3 OP1 G A 10 -13.883 36.941 -13.194 1.00 33.20 O
ATOM 4 OP2 G A 10 -16.048 36.758 -11.833 1.00 29.98 O
ATOM 5 O5' G A 10 -13.842 37.138 -10.720 1.00 28.62 O
ATOM 6 C5' G A 10 -12.536 37.694 -10.625 1.00 28.40 C
ATOM 7 C4' G A 10 -12.130 37.812 -9.168 1.00 32.35 C
ATOM 8 O4' G A 10 -13.012 38.746 -8.495 1.00 30.55 O
ATOM 9 C3' G A 10 -12.240 36.518 -8.377 1.00 28.19 C
ATOM 10 O3' G A 10 -11.014 35.808 -8.477 1.00 29.25 O
ATOM 11 C2' G A 10 -12.456 37.038 -6.961 1.00 32.74 C
ATOM 12 O2' G A 10 -11.233 37.413 -6.357 1.00 28.61 O
ATOM 13 C1' G A 10 -13.315 38.277 -7.196 1.00 29.05 C
ATOM 14 N9 G A 10 -14.757 38.047 -7.132 1.00 33.61 N
ATOM 15 C8 G A 10 -15.564 37.572 -8.138 1.00 34.52 C
ATOM 16 N7 G A 10 -16.820 37.474 -7.797 1.00 36.74 N
ATOM 17 C5 G A 10 -16.851 37.914 -6.479 1.00 37.92 C
ATOM 18 C6 G A 10 -17.942 38.032 -5.582 1.00 39.00 C
ATOM 19 O6 G A 10 -19.137 37.763 -5.779 1.00 38.01 O
ATOM 20 N1 G A 10 -17.538 38.519 -4.341 1.00 33.87 N
ATOM 21 C2 G A 10 -16.246 38.853 -4.012 1.00 34.70 C
ATOM 22 N2 G A 10 -16.050 39.307 -2.767 1.00 34.56 N
ATOM 23 N3 G A 10 -15.215 38.748 -4.844 1.00 35.05 N
ATOM 24 C4 G A 10 -15.589 38.273 -6.057 1.00 35.58 C
ATOM 25 P U A 11 -10.996 34.215 -8.636 1.00 35.26 P
ATOM 26 OP1 U A 11 -9.603 33.813 -8.929 1.00 37.81 O
ATOM 27 OP2 U A 11 -12.099 33.836 -9.547 1.00 29.99 O
ATOM 28 O5' U A 11 -11.351 33.691 -7.170 1.00 31.09 O
TER
ATOM 1 O3' A B 28 -13.738 43.152 4.912 1.00 34.99 O
ATOM 2 P G B 29 -13.098 41.703 5.157 1.00 39.97 P
ATOM 3 OP1 G B 29 -13.586 41.204 6.462 1.00 39.94 O
ATOM 4 OP2 G B 29 -11.643 41.779 4.898 1.00 34.14 O
ATOM 5 O5' G B 29 -13.796 40.832 4.015 1.00 36.47 O
ATOM 6 C5' G B 29 -15.208 40.689 4.012 1.00 37.45 C
ATOM 7 C4' G B 29 -15.667 40.141 2.677 1.00 38.57 C
ATOM 8 O4' G B 29 -15.366 41.113 1.648 1.00 35.46 O
ATOM 9 C3' G B 29 -14.973 38.854 2.253 1.00 37.25 C
ATOM 10 O3' G B 29 -15.752 37.748 2.671 1.00 35.48 O
ATOM 11 C2' G B 29 -14.984 38.958 0.734 1.00 34.75 C
ATOM 12 O2' G B 29 -16.209 38.506 0.198 1.00 34.19 O
ATOM 13 C1' G B 29 -14.870 40.459 0.495 1.00 36.89 C
ATOM 14 N9 G B 29 -13.524 40.959 0.232 1.00 34.82 N
ATOM 15 C8 G B 29 -12.622 41.437 1.151 1.00 35.90 C
ATOM 16 N7 G B 29 -11.500 41.837 0.618 1.00 34.48 N
ATOM 17 C5 G B 29 -11.671 41.613 -0.742 1.00 35.43 C
ATOM 18 C6 G B 29 -10.790 41.850 -1.824 1.00 35.71 C
ATOM 19 O6 G B 29 -9.645 42.322 -1.789 1.00 30.96 O
ATOM 20 N1 G B 29 -11.356 41.477 -3.043 1.00 32.90 N
ATOM 21 C2 G B 29 -12.616 40.947 -3.196 1.00 35.30 C
ATOM 22 N2 G B 29 -12.993 40.652 -4.448 1.00 30.64 N
ATOM 23 N3 G B 29 -13.450 40.720 -2.189 1.00 36.12 N
ATOM 24 C4 G B 29 -12.913 41.075 -0.996 1.00 35.62 C
ATOM 25 P A B 30 -15.066 36.476 3.352 1.00 41.05 P
ATOM 26 OP1 A B 30 -16.142 35.511 3.667 1.00 37.29 O
ATOM 27 OP2 A B 30 -14.154 36.957 4.414 1.00 32.67 O
ATOM 28 O5' A B 30 -14.193 35.853 2.168 1.00 37.65 O
TER
ATOM 2 P G A 10 -14.712 37.358 -12.043 1.00 29.76 P
ATOM 3 OP1 G A 10 -13.883 36.941 -13.194 1.00 33.20 O
ATOM 4 OP2 G A 10 -16.048 36.758 -11.833 1.00 29.98 O
ATOM 5 O5' G A 10 -13.842 37.138 -10.720 1.00 28.62 O
ATOM 6 C5' G A 10 -12.536 37.694 -10.625 1.00 28.40 C
ATOM 7 C4' G A 10 -12.130 37.812 -9.168 1.00 32.35 C
ATOM 8 O4' G A 10 -13.012 38.746 -8.495 1.00 30.55 O
ATOM 9 C3' G A 10 -12.240 36.518 -8.377 1.00 28.19 C
ATOM 10 O3' G A 10 -11.014 35.808 -8.477 1.00 29.25 O
ATOM 11 C2' G A 10 -12.456 37.038 -6.961 1.00 32.74 C
ATOM 12 O2' G A 10 -11.233 37.413 -6.357 1.00 28.61 O
ATOM 13 C1' G A 10 -13.315 38.277 -7.196 1.00 29.05 C
ATOM 14 N9 G A 10 -14.757 38.047 -7.132 1.00 33.61 N
ATOM 15 C8 G A 10 -15.564 37.572 -8.138 1.00 34.52 C
ATOM 16 N7 G A 10 -16.820 37.474 -7.797 1.00 36.74 N
ATOM 17 C5 G A 10 -16.851 37.914 -6.479 1.00 37.92 C
ATOM 18 C6 G A 10 -17.942 38.032 -5.582 1.00 39.00 C
ATOM 19 O6 G A 10 -19.137 37.763 -5.779 1.00 38.01 O
ATOM 20 N1 G A 10 -17.538 38.519 -4.341 1.00 33.87 N
ATOM 21 C2 G A 10 -16.246 38.853 -4.012 1.00 34.70 C
ATOM 22 N2 G A 10 -16.050 39.307 -2.767 1.00 34.56 N
ATOM 23 N3 G A 10 -15.215 38.748 -4.844 1.00 35.05 N
ATOM 24 C4 G A 10 -15.589 38.273 -6.057 1.00 35.58 C
ATOM 25 P U A 11 -10.996 34.215 -8.636 1.00 35.26 P
ATOM 26 OP1 U A 11 -9.603 33.813 -8.929 1.00 37.81 O
ATOM 27 OP2 U A 11 -12.099 33.836 -9.547 1.00 29.99 O
ATOM 28 O5' U A 11 -11.351 33.691 -7.170 1.00 31.09 O
TER
ATOM 1 O3' A B 28 -13.738 43.152 4.912 1.00 34.99 O
ATOM 2 P G B 29 -13.098 41.703 5.157 1.00 39.97 P
ATOM 3 OP1 G B 29 -13.586 41.204 6.462 1.00 39.94 O
ATOM 4 OP2 G B 29 -11.643 41.779 4.898 1.00 34.14 O
ATOM 5 O5' G B 29 -13.796 40.832 4.015 1.00 36.47 O
ATOM 6 C5' G B 29 -15.208 40.689 4.012 1.00 37.45 C
ATOM 7 C4' G B 29 -15.667 40.141 2.677 1.00 38.57 C
ATOM 8 O4' G B 29 -15.366 41.113 1.648 1.00 35.46 O
ATOM 9 C3' G B 29 -14.973 38.854 2.253 1.00 37.25 C
ATOM 10 O3' G B 29 -15.752 37.748 2.671 1.00 35.48 O
ATOM 11 C2' G B 29 -14.984 38.958 0.734 1.00 34.75 C
ATOM 12 O2' G B 29 -16.209 38.506 0.198 1.00 34.19 O
ATOM 13 C1' G B 29 -14.870 40.459 0.495 1.00 36.89 C
ATOM 14 N9 G B 29 -13.524 40.959 0.232 1.00 34.82 N
ATOM 15 C8 G B 29 -12.622 41.437 1.151 1.00 35.90 C
ATOM 16 N7 G B 29 -11.500 41.837 0.618 1.00 34.48 N
ATOM 17 C5 G B 29 -11.671 41.613 -0.742 1.00 35.43 C
ATOM 18 C6 G B 29 -10.790 41.850 -1.824 1.00 35.71 C
ATOM 19 O6 G B 29 -9.645 42.322 -1.789 1.00 30.96 O
ATOM 20 N1 G B 29 -11.356 41.477 -3.043 1.00 32.90 N
ATOM 21 C2 G B 29 -12.616 40.947 -3.196 1.00 35.30 C
ATOM 22 N2 G B 29 -12.993 40.652 -4.448 1.00 30.64 N
ATOM 23 N3 G B 29 -13.450 40.720 -2.189 1.00 36.12 N
ATOM 24 C4 G B 29 -12.913 41.075 -0.996 1.00 35.62 C
ATOM 25 P A B 30 -15.066 36.476 3.352 1.00 41.05 P
ATOM 26 OP1 A B 30 -16.142 35.511 3.667 1.00 37.29 O
ATOM 27 OP2 A B 30 -14.154 36.957 4.414 1.00 32.67 O
ATOM 28 O5' A B 30 -14.193 35.853 2.168 1.00 37.65 O
TER
Atoms:
OP1: (-13.883,36.941,-13.194)
OP2: (-16.048,36.758,-11.833)
C3': (-12.240,36.518,-8.377)
C1': (-13.315,38.277,-7.196)
C5': (-12.536,37.694,-10.625)
O6: (-19.137,37.763,-5.779)
O4': (-13.012,38.746,-8.495)
C8: (-15.564,37.572,-8.138)
C2: (-16.246,38.853,-4.012)
C6: (-17.942,38.032,-5.582)
C5: (-16.851,37.914,-6.479)
C4: (-15.589,38.273,-6.057)
P: (-14.712,37.358,-12.043)
C4': (-12.130,37.812,-9.168)
C2': (-12.456,37.038,-6.961)
O2': (-11.233,37.413,-6.357)
N1: (-17.538,38.519,-4.341)
N2: (-16.050,39.307,-2.767)
N3: (-15.215,38.748,-4.844)
N7: (-16.820,37.474,-7.797)
N9: (-14.757,38.047,-7.132)
O5': (-13.842,37.138,-10.720)
O3': (-11.014,35.808,-8.477)
OP2: (-16.048,36.758,-11.833)
C3': (-12.240,36.518,-8.377)
C1': (-13.315,38.277,-7.196)
C5': (-12.536,37.694,-10.625)
O6: (-19.137,37.763,-5.779)
O4': (-13.012,38.746,-8.495)
C8: (-15.564,37.572,-8.138)
C2: (-16.246,38.853,-4.012)
C6: (-17.942,38.032,-5.582)
C5: (-16.851,37.914,-6.479)
C4: (-15.589,38.273,-6.057)
P: (-14.712,37.358,-12.043)
C4': (-12.130,37.812,-9.168)
C2': (-12.456,37.038,-6.961)
O2': (-11.233,37.413,-6.357)
N1: (-17.538,38.519,-4.341)
N2: (-16.050,39.307,-2.767)
N3: (-15.215,38.748,-4.844)
N7: (-16.820,37.474,-7.797)
N9: (-14.757,38.047,-7.132)
O5': (-13.842,37.138,-10.720)
O3': (-11.014,35.808,-8.477)
OP1: (-13.586,41.204,6.462)
OP2: (-11.643,41.779,4.898)
C3': (-14.973,38.854,2.253)
C1': (-14.870,40.459,0.495)
C5': (-15.208,40.689,4.012)
O6: (-9.645,42.322,-1.789)
O4': (-15.366,41.113,1.648)
C8: (-12.622,41.437,1.151)
C2: (-12.616,40.947,-3.196)
C6: (-10.790,41.850,-1.824)
C5: (-11.671,41.613,-0.742)
C4: (-12.913,41.075,-0.996)
P: (-13.098,41.703,5.157)
C4': (-15.667,40.141,2.677)
C2': (-14.984,38.958,0.734)
O2': (-16.209,38.506,0.198)
N1: (-11.356,41.477,-3.043)
N2: (-12.993,40.652,-4.448)
N3: (-13.450,40.720,-2.189)
N7: (-11.500,41.837,0.618)
N9: (-13.524,40.959,0.232)
O5': (-13.796,40.832,4.015)
O3': (-15.752,37.748,2.671)
OP2: (-11.643,41.779,4.898)
C3': (-14.973,38.854,2.253)
C1': (-14.870,40.459,0.495)
C5': (-15.208,40.689,4.012)
O6: (-9.645,42.322,-1.789)
O4': (-15.366,41.113,1.648)
C8: (-12.622,41.437,1.151)
C2: (-12.616,40.947,-3.196)
C6: (-10.790,41.850,-1.824)
C5: (-11.671,41.613,-0.742)
C4: (-12.913,41.075,-0.996)
P: (-13.098,41.703,5.157)
C4': (-15.667,40.141,2.677)
C2': (-14.984,38.958,0.734)
O2': (-16.209,38.506,0.198)
N1: (-11.356,41.477,-3.043)
N2: (-12.993,40.652,-4.448)
N3: (-13.450,40.720,-2.189)
N7: (-11.500,41.837,0.618)
N9: (-13.524,40.959,0.232)
O5': (-13.796,40.832,4.015)
O3': (-15.752,37.748,2.671)
Image (generated by PyMOL):