Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B10:B29
Extra
PDB:
ATOM 1 O3' G A 9 -14.876 -16.492 15.864 1.00 28.40 O
ATOM 2 P G A 10 -14.845 -18.072 15.565 1.00 26.16 P
ATOM 3 OP1 G A 10 -14.323 -18.264 14.192 1.00 27.46 O
ATOM 4 OP2 G A 10 -16.141 -18.689 15.948 1.00 26.34 O
ATOM 5 O5' G A 10 -13.736 -18.586 16.577 1.00 25.41 O
ATOM 6 C5' G A 10 -12.544 -17.821 16.788 1.00 24.12 C
ATOM 7 C4' G A 10 -12.250 -17.713 18.259 1.00 23.76 C
ATOM 8 O4' G A 10 -13.217 -16.863 18.924 1.00 25.08 O
ATOM 9 C3' G A 10 -12.327 -19.025 18.996 1.00 22.84 C
ATOM 10 O3' G A 10 -11.105 -19.709 18.823 1.00 22.43 O
ATOM 11 C2' G A 10 -12.591 -18.594 20.431 1.00 22.86 C
ATOM 12 O2' G A 10 -11.394 -18.203 21.058 1.00 24.01 O
ATOM 13 C1' G A 10 -13.454 -17.346 20.232 1.00 23.42 C
ATOM 14 N9 G A 10 -14.891 -17.541 20.386 1.00 23.81 N
ATOM 15 C8 G A 10 -15.766 -18.034 19.444 1.00 24.91 C
ATOM 16 N7 G A 10 -17.007 -18.052 19.852 1.00 24.27 N
ATOM 17 C5 G A 10 -16.952 -17.549 21.146 1.00 24.15 C
ATOM 18 C6 G A 10 -17.991 -17.326 22.096 1.00 24.65 C
ATOM 19 O6 G A 10 -19.205 -17.536 21.979 1.00 25.72 O
ATOM 20 N1 G A 10 -17.495 -16.805 23.284 1.00 24.28 N
ATOM 21 C2 G A 10 -16.174 -16.537 23.538 1.00 24.81 C
ATOM 22 N2 G A 10 -15.902 -16.052 24.758 1.00 23.77 N
ATOM 23 N3 G A 10 -15.193 -16.735 22.665 1.00 24.73 N
ATOM 24 C4 G A 10 -15.652 -17.238 21.496 1.00 23.98 C
ATOM 25 P U A 11 -11.048 -21.280 19.086 1.00 20.81 P
ATOM 26 OP1 U A 11 -9.757 -21.813 18.582 1.00 19.82 O
ATOM 27 OP2 U A 11 -12.321 -21.840 18.586 1.00 19.64 O
ATOM 28 O5' U A 11 -11.029 -21.334 20.668 1.00 21.18 O
TER
ATOM 1 O3' A B 28 -14.024 -12.411 32.618 1.00 35.72 O
ATOM 2 P G B 29 -13.423 -13.877 32.906 1.00 35.97 P
ATOM 3 OP1 G B 29 -13.929 -14.316 34.238 1.00 35.20 O
ATOM 4 OP2 G B 29 -11.949 -13.869 32.641 1.00 34.49 O
ATOM 5 O5' G B 29 -14.137 -14.787 31.816 1.00 34.06 O
ATOM 6 C5' G B 29 -15.568 -14.872 31.753 1.00 33.27 C
ATOM 7 C4' G B 29 -15.984 -15.339 30.386 1.00 33.38 C
ATOM 8 O4' G B 29 -15.633 -14.319 29.423 1.00 32.89 O
ATOM 9 C3' G B 29 -15.257 -16.590 29.919 1.00 33.25 C
ATOM 10 O3' G B 29 -15.945 -17.759 30.319 1.00 33.69 O
ATOM 11 C2' G B 29 -15.261 -16.442 28.410 1.00 32.96 C
ATOM 12 O2' G B 29 -16.487 -16.874 27.864 1.00 33.54 O
ATOM 13 C1' G B 29 -15.137 -14.927 28.245 1.00 32.67 C
ATOM 14 N9 G B 29 -13.767 -14.464 28.040 1.00 30.94 N
ATOM 15 C8 G B 29 -12.893 -14.031 29.004 1.00 31.01 C
ATOM 16 N7 G B 29 -11.753 -13.626 28.518 1.00 31.61 N
ATOM 17 C5 G B 29 -11.877 -13.813 27.149 1.00 30.36 C
ATOM 18 C6 G B 29 -10.969 -13.530 26.094 1.00 30.08 C
ATOM 19 O6 G B 29 -9.850 -13.023 26.161 1.00 29.65 O
ATOM 20 N1 G B 29 -11.494 -13.884 24.858 1.00 29.69 N
ATOM 21 C2 G B 29 -12.738 -14.425 24.655 1.00 29.81 C
ATOM 22 N2 G B 29 -13.065 -14.697 23.387 1.00 28.85 N
ATOM 23 N3 G B 29 -13.597 -14.681 25.624 1.00 30.99 N
ATOM 24 C4 G B 29 -13.106 -14.350 26.839 1.00 30.86 C
ATOM 25 P A B 30 -15.158 -18.913 31.105 1.00 35.06 P
ATOM 26 OP1 A B 30 -16.195 -19.857 31.600 1.00 36.15 O
ATOM 27 OP2 A B 30 -14.206 -18.287 32.063 1.00 34.40 O
ATOM 28 O5' A B 30 -14.304 -19.655 29.985 1.00 35.95 O
TER
ATOM 2 P G A 10 -14.845 -18.072 15.565 1.00 26.16 P
ATOM 3 OP1 G A 10 -14.323 -18.264 14.192 1.00 27.46 O
ATOM 4 OP2 G A 10 -16.141 -18.689 15.948 1.00 26.34 O
ATOM 5 O5' G A 10 -13.736 -18.586 16.577 1.00 25.41 O
ATOM 6 C5' G A 10 -12.544 -17.821 16.788 1.00 24.12 C
ATOM 7 C4' G A 10 -12.250 -17.713 18.259 1.00 23.76 C
ATOM 8 O4' G A 10 -13.217 -16.863 18.924 1.00 25.08 O
ATOM 9 C3' G A 10 -12.327 -19.025 18.996 1.00 22.84 C
ATOM 10 O3' G A 10 -11.105 -19.709 18.823 1.00 22.43 O
ATOM 11 C2' G A 10 -12.591 -18.594 20.431 1.00 22.86 C
ATOM 12 O2' G A 10 -11.394 -18.203 21.058 1.00 24.01 O
ATOM 13 C1' G A 10 -13.454 -17.346 20.232 1.00 23.42 C
ATOM 14 N9 G A 10 -14.891 -17.541 20.386 1.00 23.81 N
ATOM 15 C8 G A 10 -15.766 -18.034 19.444 1.00 24.91 C
ATOM 16 N7 G A 10 -17.007 -18.052 19.852 1.00 24.27 N
ATOM 17 C5 G A 10 -16.952 -17.549 21.146 1.00 24.15 C
ATOM 18 C6 G A 10 -17.991 -17.326 22.096 1.00 24.65 C
ATOM 19 O6 G A 10 -19.205 -17.536 21.979 1.00 25.72 O
ATOM 20 N1 G A 10 -17.495 -16.805 23.284 1.00 24.28 N
ATOM 21 C2 G A 10 -16.174 -16.537 23.538 1.00 24.81 C
ATOM 22 N2 G A 10 -15.902 -16.052 24.758 1.00 23.77 N
ATOM 23 N3 G A 10 -15.193 -16.735 22.665 1.00 24.73 N
ATOM 24 C4 G A 10 -15.652 -17.238 21.496 1.00 23.98 C
ATOM 25 P U A 11 -11.048 -21.280 19.086 1.00 20.81 P
ATOM 26 OP1 U A 11 -9.757 -21.813 18.582 1.00 19.82 O
ATOM 27 OP2 U A 11 -12.321 -21.840 18.586 1.00 19.64 O
ATOM 28 O5' U A 11 -11.029 -21.334 20.668 1.00 21.18 O
TER
ATOM 1 O3' A B 28 -14.024 -12.411 32.618 1.00 35.72 O
ATOM 2 P G B 29 -13.423 -13.877 32.906 1.00 35.97 P
ATOM 3 OP1 G B 29 -13.929 -14.316 34.238 1.00 35.20 O
ATOM 4 OP2 G B 29 -11.949 -13.869 32.641 1.00 34.49 O
ATOM 5 O5' G B 29 -14.137 -14.787 31.816 1.00 34.06 O
ATOM 6 C5' G B 29 -15.568 -14.872 31.753 1.00 33.27 C
ATOM 7 C4' G B 29 -15.984 -15.339 30.386 1.00 33.38 C
ATOM 8 O4' G B 29 -15.633 -14.319 29.423 1.00 32.89 O
ATOM 9 C3' G B 29 -15.257 -16.590 29.919 1.00 33.25 C
ATOM 10 O3' G B 29 -15.945 -17.759 30.319 1.00 33.69 O
ATOM 11 C2' G B 29 -15.261 -16.442 28.410 1.00 32.96 C
ATOM 12 O2' G B 29 -16.487 -16.874 27.864 1.00 33.54 O
ATOM 13 C1' G B 29 -15.137 -14.927 28.245 1.00 32.67 C
ATOM 14 N9 G B 29 -13.767 -14.464 28.040 1.00 30.94 N
ATOM 15 C8 G B 29 -12.893 -14.031 29.004 1.00 31.01 C
ATOM 16 N7 G B 29 -11.753 -13.626 28.518 1.00 31.61 N
ATOM 17 C5 G B 29 -11.877 -13.813 27.149 1.00 30.36 C
ATOM 18 C6 G B 29 -10.969 -13.530 26.094 1.00 30.08 C
ATOM 19 O6 G B 29 -9.850 -13.023 26.161 1.00 29.65 O
ATOM 20 N1 G B 29 -11.494 -13.884 24.858 1.00 29.69 N
ATOM 21 C2 G B 29 -12.738 -14.425 24.655 1.00 29.81 C
ATOM 22 N2 G B 29 -13.065 -14.697 23.387 1.00 28.85 N
ATOM 23 N3 G B 29 -13.597 -14.681 25.624 1.00 30.99 N
ATOM 24 C4 G B 29 -13.106 -14.350 26.839 1.00 30.86 C
ATOM 25 P A B 30 -15.158 -18.913 31.105 1.00 35.06 P
ATOM 26 OP1 A B 30 -16.195 -19.857 31.600 1.00 36.15 O
ATOM 27 OP2 A B 30 -14.206 -18.287 32.063 1.00 34.40 O
ATOM 28 O5' A B 30 -14.304 -19.655 29.985 1.00 35.95 O
TER
Atoms:
OP1: (-14.323,-18.264,14.192)
OP2: (-16.141,-18.689,15.948)
C3': (-12.327,-19.025,18.996)
C1': (-13.454,-17.346,20.232)
C5': (-12.544,-17.821,16.788)
O6: (-19.205,-17.536,21.979)
O4': (-13.217,-16.863,18.924)
C8: (-15.766,-18.034,19.444)
C2: (-16.174,-16.537,23.538)
C6: (-17.991,-17.326,22.096)
C5: (-16.952,-17.549,21.146)
C4: (-15.652,-17.238,21.496)
P: (-14.845,-18.072,15.565)
C4': (-12.250,-17.713,18.259)
C2': (-12.591,-18.594,20.431)
O2': (-11.394,-18.203,21.058)
N1: (-17.495,-16.805,23.284)
N2: (-15.902,-16.052,24.758)
N3: (-15.193,-16.735,22.665)
N7: (-17.007,-18.052,19.852)
N9: (-14.891,-17.541,20.386)
O5': (-13.736,-18.586,16.577)
O3': (-11.105,-19.709,18.823)
OP2: (-16.141,-18.689,15.948)
C3': (-12.327,-19.025,18.996)
C1': (-13.454,-17.346,20.232)
C5': (-12.544,-17.821,16.788)
O6: (-19.205,-17.536,21.979)
O4': (-13.217,-16.863,18.924)
C8: (-15.766,-18.034,19.444)
C2: (-16.174,-16.537,23.538)
C6: (-17.991,-17.326,22.096)
C5: (-16.952,-17.549,21.146)
C4: (-15.652,-17.238,21.496)
P: (-14.845,-18.072,15.565)
C4': (-12.250,-17.713,18.259)
C2': (-12.591,-18.594,20.431)
O2': (-11.394,-18.203,21.058)
N1: (-17.495,-16.805,23.284)
N2: (-15.902,-16.052,24.758)
N3: (-15.193,-16.735,22.665)
N7: (-17.007,-18.052,19.852)
N9: (-14.891,-17.541,20.386)
O5': (-13.736,-18.586,16.577)
O3': (-11.105,-19.709,18.823)
OP1: (-13.929,-14.316,34.238)
OP2: (-11.949,-13.869,32.641)
C3': (-15.257,-16.590,29.919)
C1': (-15.137,-14.927,28.245)
C5': (-15.568,-14.872,31.753)
O6: (-9.850,-13.023,26.161)
O4': (-15.633,-14.319,29.423)
C8: (-12.893,-14.031,29.004)
C2: (-12.738,-14.425,24.655)
C6: (-10.969,-13.530,26.094)
C5: (-11.877,-13.813,27.149)
C4: (-13.106,-14.350,26.839)
P: (-13.423,-13.877,32.906)
C4': (-15.984,-15.339,30.386)
C2': (-15.261,-16.442,28.410)
O2': (-16.487,-16.874,27.864)
N1: (-11.494,-13.884,24.858)
N2: (-13.065,-14.697,23.387)
N3: (-13.597,-14.681,25.624)
N7: (-11.753,-13.626,28.518)
N9: (-13.767,-14.464,28.040)
O5': (-14.137,-14.787,31.816)
O3': (-15.945,-17.759,30.319)
OP2: (-11.949,-13.869,32.641)
C3': (-15.257,-16.590,29.919)
C1': (-15.137,-14.927,28.245)
C5': (-15.568,-14.872,31.753)
O6: (-9.850,-13.023,26.161)
O4': (-15.633,-14.319,29.423)
C8: (-12.893,-14.031,29.004)
C2: (-12.738,-14.425,24.655)
C6: (-10.969,-13.530,26.094)
C5: (-11.877,-13.813,27.149)
C4: (-13.106,-14.350,26.839)
P: (-13.423,-13.877,32.906)
C4': (-15.984,-15.339,30.386)
C2': (-15.261,-16.442,28.410)
O2': (-16.487,-16.874,27.864)
N1: (-11.494,-13.884,24.858)
N2: (-13.065,-14.697,23.387)
N3: (-13.597,-14.681,25.624)
N7: (-11.753,-13.626,28.518)
N9: (-13.767,-14.464,28.040)
O5': (-14.137,-14.787,31.816)
O3': (-15.945,-17.759,30.319)
Image (generated by PyMOL):