ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:A403:A418

Extra

PDB:
ATOM 1 O3' A A 402 -126.229 47.308 -75.279 1.00179.69 O
ATOM 2 P G A 403 -127.546 46.403 -75.250 1.00177.73 P
ATOM 3 OP1 G A 403 -128.175 46.494 -76.593 1.00149.01 O
ATOM 4 OP2 G A 403 -128.317 46.736 -74.028 1.00144.25 O
ATOM 5 O5' G A 403 -126.936 44.935 -75.022 1.00147.73 O
ATOM 6 C5' G A 403 -126.442 44.136 -76.108 1.00146.52 C
ATOM 7 C4' G A 403 -125.214 43.319 -75.717 1.00135.56 C
ATOM 8 O4' G A 403 -124.022 44.144 -75.783 1.00123.84 O
ATOM 9 C3' G A 403 -125.232 42.701 -74.318 1.00125.02 C
ATOM 10 O3' G A 403 -124.953 41.312 -74.399 1.00133.98 O
ATOM 11 C2' G A 403 -124.143 43.475 -73.579 1.00124.53 C
ATOM 12 O2' G A 403 -123.484 42.723 -72.580 1.00130.09 O
ATOM 13 C1' G A 403 -123.185 43.778 -74.717 1.00117.88 C
ATOM 14 N9 G A 403 -122.291 44.889 -74.440 1.00122.00 N
ATOM 15 C8 G A 403 -122.501 46.213 -74.732 1.00125.07 C
ATOM 16 N7 G A 403 -121.513 46.980 -74.361 1.00130.75 N
ATOM 17 C5 G A 403 -120.593 46.110 -73.787 1.00134.68 C
ATOM 18 C6 G A 403 -119.326 46.362 -73.207 1.00135.85 C
ATOM 19 O6 G A 403 -118.730 47.439 -73.072 1.00123.41 O
ATOM 20 N1 G A 403 -118.732 45.194 -72.751 1.00132.08 N
ATOM 21 C2 G A 403 -119.289 43.945 -72.841 1.00127.34 C
ATOM 22 N2 G A 403 -118.559 42.938 -72.342 1.00123.95 N
ATOM 23 N3 G A 403 -120.472 43.694 -73.380 1.00124.41 N
ATOM 24 C4 G A 403 -121.063 44.820 -73.830 1.00123.45 C
ATOM 25 P A A 404 -125.919 40.285 -73.642 1.00148.82 P
ATOM 26 OP1 A A 404 -126.653 41.062 -72.620 1.00112.33 O
ATOM 27 OP2 A A 404 -125.129 39.095 -73.238 1.00136.81 O
ATOM 28 O5' A A 404 -126.946 39.837 -74.791 1.00129.96 O
TER

ATOM 1 O3' U B 417 -114.383 36.413 -68.737 1.00 83.85 O
ATOM 2 P G B 418 -113.739 36.810 -70.154 1.00105.00 P
ATOM 3 OP1 G B 418 -114.238 35.861 -71.185 1.00 79.60 O
ATOM 4 OP2 G B 418 -112.287 36.956 -69.883 1.00 86.60 O
ATOM 5 O5' G B 418 -114.322 38.260 -70.507 1.00100.02 O
ATOM 6 C5' G B 418 -113.713 39.023 -71.536 1.00 92.95 C
ATOM 7 C4' G B 418 -114.649 40.150 -71.887 1.00 90.96 C
ATOM 8 O4' G B 418 -115.747 39.579 -72.630 1.00 98.25 O
ATOM 9 C3' G B 418 -115.252 40.813 -70.654 1.00 93.58 C
ATOM 10 O3' G B 418 -115.084 42.243 -70.581 1.00 96.38 O
ATOM 11 C2' G B 418 -116.725 40.419 -70.651 1.00 84.98 C
ATOM 12 O2' G B 418 -117.563 41.510 -70.340 1.00 93.57 O
ATOM 13 C1' G B 418 -116.983 39.976 -72.081 1.00 90.86 C
ATOM 14 N9 G B 418 -117.911 38.855 -72.111 1.00 91.59 N
ATOM 15 C8 G B 418 -117.646 37.548 -71.811 1.00 87.84 C
ATOM 16 N7 G B 418 -118.696 36.781 -71.921 1.00 98.09 N
ATOM 17 C5 G B 418 -119.723 37.628 -72.312 1.00 92.43 C
ATOM 18 C6 G B 418 -121.094 37.371 -72.589 1.00 91.71 C
ATOM 19 O6 G B 418 -121.730 36.308 -72.548 1.00 82.25 O
ATOM 20 N1 G B 418 -121.766 38.534 -72.950 1.00112.38 N
ATOM 21 C2 G B 418 -121.196 39.782 -73.041 1.00104.05 C
ATOM 22 N2 G B 418 -122.013 40.780 -73.410 1.00 90.47 N
ATOM 23 N3 G B 418 -119.917 40.033 -72.786 1.00103.46 N
ATOM 24 C4 G B 418 -119.246 38.913 -72.430 1.00 97.08 C
ATOM 25 P U B 419 -114.808 43.266 -71.785 1.00 97.91 P
ATOM 26 OP1 U B 419 -113.422 43.741 -71.596 1.00 98.50 O
ATOM 27 OP2 U B 419 -115.923 44.236 -71.776 1.00 87.02 O
ATOM 28 O5' U B 419 -114.868 42.472 -73.174 1.00 88.51 O
TER

Atoms:
OP1: (-128.175,46.494,-76.593)
OP2: (-128.317,46.736,-74.028)
C3': (-125.232,42.701,-74.318)
C1': (-123.185,43.778,-74.717)
C5': (-126.442,44.136,-76.108)
O6: (-118.730,47.439,-73.072)
O4': (-124.022,44.144,-75.783)
C8: (-122.501,46.213,-74.732)
C2: (-119.289,43.945,-72.841)
C6: (-119.326,46.362,-73.207)
C5: (-120.593,46.110,-73.787)
C4: (-121.063,44.820,-73.830)
P: (-127.546,46.403,-75.250)
C4': (-125.214,43.319,-75.717)
C2': (-124.143,43.475,-73.579)
O2': (-123.484,42.723,-72.580)
N1: (-118.732,45.194,-72.751)
N2: (-118.559,42.938,-72.342)
N3: (-120.472,43.694,-73.380)
N7: (-121.513,46.980,-74.361)
N9: (-122.291,44.889,-74.440)
O5': (-126.936,44.935,-75.022)
O3': (-124.953,41.312,-74.399)
OP1: (-114.238,35.861,-71.185)
OP2: (-112.287,36.956,-69.883)
C3': (-115.252,40.813,-70.654)
C1': (-116.983,39.976,-72.081)
C5': (-113.713,39.023,-71.536)
O6: (-121.730,36.308,-72.548)
O4': (-115.747,39.579,-72.630)
C8: (-117.646,37.548,-71.811)
C2: (-121.196,39.782,-73.041)
C6: (-121.094,37.371,-72.589)
C5: (-119.723,37.628,-72.312)
C4: (-119.246,38.913,-72.430)
P: (-113.739,36.810,-70.154)
C4': (-114.649,40.150,-71.887)
C2': (-116.725,40.419,-70.651)
O2': (-117.563,41.510,-70.340)
N1: (-121.766,38.534,-72.950)
N2: (-122.013,40.780,-73.410)
N3: (-119.917,40.033,-72.786)
N7: (-118.696,36.781,-71.921)
N9: (-117.911,38.855,-72.111)
O5': (-114.322,38.260,-70.507)
O3': (-115.084,42.243,-70.581)
Image (generated by PyMOL):
PyMOL image
show in jmol