ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHY:A403:A418

Extra

PDB:
ATOM 1 O3' A A 402 124.224 46.889 75.449 1.00132.10 O
ATOM 2 P G A 403 125.500 45.981 75.795 1.00169.88 P
ATOM 3 OP1 G A 403 125.924 46.337 77.171 1.00175.17 O
ATOM 4 OP2 G A 403 126.468 46.149 74.680 1.00167.75 O
ATOM 5 O5' G A 403 124.900 44.502 75.778 1.00143.55 O
ATOM 6 C5' G A 403 124.165 43.989 76.893 1.00137.08 C
ATOM 7 C4' G A 403 123.292 42.805 76.508 1.00134.86 C
ATOM 8 O4' G A 403 121.899 43.179 76.643 1.00128.35 O
ATOM 9 C3' G A 403 123.453 42.302 75.076 1.00131.22 C
ATOM 10 O3' G A 403 123.214 40.892 75.037 1.00130.32 O
ATOM 11 C2' G A 403 122.334 43.032 74.344 1.00121.70 C
ATOM 12 O2' G A 403 121.902 42.405 73.160 1.00125.85 O
ATOM 13 C1' G A 403 121.241 43.049 75.401 1.00122.86 C
ATOM 14 N9 G A 403 120.301 44.163 75.269 1.00136.17 N
ATOM 15 C8 G A 403 120.423 45.446 75.751 1.00138.10 C
ATOM 16 N7 G A 403 119.387 46.200 75.481 1.00141.46 N
ATOM 17 C5 G A 403 118.525 45.363 74.779 1.00143.68 C
ATOM 18 C6 G A 403 117.242 45.602 74.213 1.00137.56 C
ATOM 19 O6 G A 403 116.571 46.640 74.213 1.00136.55 O
ATOM 20 N1 G A 403 116.744 44.462 73.595 1.00134.83 N
ATOM 21 C2 G A 403 117.397 43.256 73.530 1.00136.42 C
ATOM 22 N2 G A 403 116.777 42.261 72.897 1.00139.35 N
ATOM 23 N3 G A 403 118.582 43.017 74.044 1.00142.54 N
ATOM 24 C4 G A 403 119.082 44.107 74.649 1.00144.87 C
ATOM 25 P A A 404 124.290 39.904 74.347 1.00146.93 P
ATOM 26 OP1 A A 404 125.085 40.719 73.390 1.00144.69 O
ATOM 27 OP2 A A 404 123.540 38.729 73.835 1.00150.96 O
ATOM 28 O5' A A 404 125.210 39.464 75.569 1.00135.72 O
TER

ATOM 1 O3' U B 417 112.158 36.441 69.302 1.00 89.04 O
ATOM 2 P G B 418 111.660 36.098 70.780 1.00117.61 P
ATOM 3 OP1 G B 418 112.130 34.719 71.093 1.00108.96 O
ATOM 4 OP2 G B 418 110.205 36.387 70.825 1.00116.40 O
ATOM 5 O5' G B 418 112.442 37.157 71.673 1.00132.43 O
ATOM 6 C5' G B 418 111.744 38.043 72.553 1.00126.94 C
ATOM 7 C4' G B 418 112.474 39.356 72.694 1.00129.73 C
ATOM 8 O4' G B 418 113.698 39.120 73.446 1.00128.32 O
ATOM 9 C3' G B 418 112.881 39.983 71.368 1.00127.26 C
ATOM 10 O3' G B 418 112.610 41.407 71.321 1.00129.79 O
ATOM 11 C2' G B 418 114.380 39.671 71.231 1.00121.07 C
ATOM 12 O2' G B 418 115.136 40.681 70.600 1.00128.76 O
ATOM 13 C1' G B 418 114.848 39.426 72.673 1.00123.13 C
ATOM 14 N9 G B 418 115.784 38.291 72.798 1.00120.85 N
ATOM 15 C8 G B 418 115.378 36.982 72.776 1.00118.18 C
ATOM 16 N7 G B 418 116.351 36.126 72.888 1.00127.80 N
ATOM 17 C5 G B 418 117.499 36.897 72.992 1.00130.57 C
ATOM 18 C6 G B 418 118.863 36.494 73.136 1.00128.56 C
ATOM 19 O6 G B 418 119.336 35.352 73.200 1.00123.38 O
ATOM 20 N1 G B 418 119.720 37.583 73.208 1.00127.67 N
ATOM 21 C2 G B 418 119.312 38.891 73.152 1.00133.97 C
ATOM 22 N2 G B 418 120.292 39.803 73.240 1.00133.44 N
ATOM 23 N3 G B 418 118.045 39.278 73.018 1.00139.49 N
ATOM 24 C4 G B 418 117.173 38.241 72.940 1.00132.42 C
ATOM 25 P U B 419 112.873 42.408 72.563 1.00136.19 P
ATOM 26 OP1 U B 419 112.289 43.717 72.190 1.00137.45 O
ATOM 27 OP2 U B 419 114.309 42.347 72.874 1.00145.63 O
ATOM 28 O5' U B 419 112.033 41.779 73.756 1.00152.40 O
TER

Atoms:
OP1: (125.924,46.337,77.171)
OP2: (126.468,46.149,74.680)
C3': (123.453,42.302,75.076)
C1': (121.241,43.049,75.401)
C5': (124.165,43.989,76.893)
O6: (116.571,46.640,74.213)
O4': (121.899,43.179,76.643)
C8: (120.423,45.446,75.751)
C2: (117.397,43.256,73.530)
C6: (117.242,45.602,74.213)
C5: (118.525,45.363,74.779)
C4: (119.082,44.107,74.649)
P: (125.500,45.981,75.795)
C4': (123.292,42.805,76.508)
C2': (122.334,43.032,74.344)
O2': (121.902,42.405,73.160)
N1: (116.744,44.462,73.595)
N2: (116.777,42.261,72.897)
N3: (118.582,43.017,74.044)
N7: (119.387,46.200,75.481)
N9: (120.301,44.163,75.269)
O5': (124.900,44.502,75.778)
O3': (123.214,40.892,75.037)
OP1: (112.130,34.719,71.093)
OP2: (110.205,36.387,70.825)
C3': (112.881,39.983,71.368)
C1': (114.848,39.426,72.673)
C5': (111.744,38.043,72.553)
O6: (119.336,35.352,73.200)
O4': (113.698,39.120,73.446)
C8: (115.378,36.982,72.776)
C2: (119.312,38.891,73.152)
C6: (118.863,36.494,73.136)
C5: (117.499,36.897,72.992)
C4: (117.173,38.241,72.940)
P: (111.660,36.098,70.780)
C4': (112.474,39.356,72.694)
C2': (114.380,39.671,71.231)
O2': (115.136,40.681,70.600)
N1: (119.720,37.583,73.208)
N2: (120.292,39.803,73.240)
N3: (118.045,39.278,73.018)
N7: (116.351,36.126,72.888)
N9: (115.784,38.291,72.798)
O5': (112.442,37.157,71.673)
O3': (112.610,41.407,71.321)
Image (generated by PyMOL):
PyMOL image
show in jmol