Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2384:A2422
Extra
PDB:
ATOM 1 O3' U A2383 -115.621 -47.751 39.057 1.00 0.01 O
ATOM 2 P G A2384 -114.631 -47.329 40.228 1.00 0.01 P
ATOM 3 OP1 G A2384 -114.987 -48.155 41.404 1.00 0.01 O
ATOM 4 OP2 G A2384 -114.682 -45.848 40.353 1.00 0.01 O
ATOM 5 O5' G A2384 -113.214 -47.753 39.642 1.00 0.01 O
ATOM 6 C5' G A2384 -112.516 -48.880 40.149 1.00 0.01 C
ATOM 7 C4' G A2384 -111.056 -48.609 40.256 1.00 0.01 C
ATOM 8 O4' G A2384 -110.560 -48.240 38.932 1.00 0.01 O
ATOM 9 C3' G A2384 -110.691 -47.441 41.189 1.00 0.01 C
ATOM 10 O3' G A2384 -109.515 -47.727 41.954 1.00 0.01 O
ATOM 11 C2' G A2384 -110.364 -46.352 40.195 1.00 0.01 C
ATOM 12 O2' G A2384 -109.512 -45.346 40.670 1.00 0.01 O
ATOM 13 C1' G A2384 -109.707 -47.161 39.111 1.00 0.01 C
ATOM 14 N9 G A2384 -109.467 -46.415 37.876 1.00 0.01 N
ATOM 15 C8 G A2384 -110.130 -45.330 37.364 1.00 0.01 C
ATOM 16 N7 G A2384 -109.534 -44.768 36.343 1.00 0.01 N
ATOM 17 C5 G A2384 -108.360 -45.481 36.231 1.00 0.01 C
ATOM 18 C6 G A2384 -107.280 -45.358 35.336 1.00 0.01 C
ATOM 19 O6 G A2384 -107.112 -44.566 34.417 1.00 0.01 O
ATOM 20 N1 G A2384 -106.286 -46.284 35.550 1.00 0.01 N
ATOM 21 C2 G A2384 -106.309 -47.230 36.515 1.00 0.01 C
ATOM 22 N2 G A2384 -105.246 -48.043 36.554 1.00 0.01 N
ATOM 23 N3 G A2384 -107.303 -47.350 37.382 1.00 0.01 N
ATOM 24 C4 G A2384 -108.289 -46.455 37.183 1.00 0.01 C
ATOM 25 P A A2385 -109.594 -48.456 43.395 1.00 0.01 P
ATOM 26 OP1 A A2385 -110.964 -48.314 43.910 1.00 0.01 O
ATOM 27 OP2 A A2385 -108.471 -47.956 44.222 1.00 0.01 O
ATOM 28 O5' A A2385 -109.341 -49.941 43.001 1.00 0.01 O
TER
ATOM 1 O3' G B2421 -101.630 -53.718 34.787 1.00 0.01 O
ATOM 2 P G B2422 -101.368 -52.417 33.923 1.00 0.01 P
ATOM 3 OP1 G B2422 -102.160 -52.532 32.707 1.00 0.01 O
ATOM 4 OP2 G B2422 -99.921 -52.274 33.816 1.00 0.01 O
ATOM 5 O5' G B2422 -101.946 -51.275 34.819 1.00 0.01 O
ATOM 6 C5' G B2422 -101.494 -49.948 34.672 1.00 0.01 C
ATOM 7 C4' G B2422 -101.625 -49.214 35.955 1.00 0.01 C
ATOM 8 O4' G B2422 -102.917 -49.484 36.522 1.00 0.01 O
ATOM 9 C3' G B2422 -100.682 -49.639 37.040 1.00 0.01 C
ATOM 10 O3' G B2422 -99.415 -49.072 36.886 1.00 0.01 O
ATOM 11 C2' G B2422 -101.392 -49.139 38.256 1.00 0.01 C
ATOM 12 O2' G B2422 -101.289 -47.733 38.317 1.00 0.01 O
ATOM 13 C1' G B2422 -102.824 -49.472 37.912 1.00 0.01 C
ATOM 14 N9 G B2422 -103.236 -50.775 38.435 1.00 0.01 N
ATOM 15 C8 G B2422 -102.484 -51.789 38.911 1.00 0.01 C
ATOM 16 N7 G B2422 -103.203 -52.768 39.329 1.00 0.01 N
ATOM 17 C5 G B2422 -104.494 -52.361 39.120 1.00 0.01 C
ATOM 18 C6 G B2422 -105.724 -53.008 39.372 1.00 0.01 C
ATOM 19 O6 G B2422 -105.908 -54.143 39.847 1.00 0.01 O
ATOM 20 N1 G B2422 -106.806 -52.190 39.007 1.00 0.01 N
ATOM 21 C2 G B2422 -106.689 -50.928 38.465 1.00 0.01 C
ATOM 22 N2 G B2422 -107.811 -50.274 38.174 1.00 0.00 N
ATOM 23 N3 G B2422 -105.549 -50.346 38.217 1.00 0.01 N
ATOM 24 C4 G B2422 -104.522 -51.121 38.581 1.00 0.01 C
ATOM 25 P A B2423 -98.257 -49.865 36.124 1.00 0.14 P
ATOM 26 OP1 A B2423 -97.541 -48.876 35.268 1.00 0.14 O
ATOM 27 OP2 A B2423 -98.864 -51.072 35.499 1.00 0.14 O
ATOM 28 O5' A B2423 -97.354 -50.308 37.300 1.00 0.14 O
TER
ATOM 2 P G A2384 -114.631 -47.329 40.228 1.00 0.01 P
ATOM 3 OP1 G A2384 -114.987 -48.155 41.404 1.00 0.01 O
ATOM 4 OP2 G A2384 -114.682 -45.848 40.353 1.00 0.01 O
ATOM 5 O5' G A2384 -113.214 -47.753 39.642 1.00 0.01 O
ATOM 6 C5' G A2384 -112.516 -48.880 40.149 1.00 0.01 C
ATOM 7 C4' G A2384 -111.056 -48.609 40.256 1.00 0.01 C
ATOM 8 O4' G A2384 -110.560 -48.240 38.932 1.00 0.01 O
ATOM 9 C3' G A2384 -110.691 -47.441 41.189 1.00 0.01 C
ATOM 10 O3' G A2384 -109.515 -47.727 41.954 1.00 0.01 O
ATOM 11 C2' G A2384 -110.364 -46.352 40.195 1.00 0.01 C
ATOM 12 O2' G A2384 -109.512 -45.346 40.670 1.00 0.01 O
ATOM 13 C1' G A2384 -109.707 -47.161 39.111 1.00 0.01 C
ATOM 14 N9 G A2384 -109.467 -46.415 37.876 1.00 0.01 N
ATOM 15 C8 G A2384 -110.130 -45.330 37.364 1.00 0.01 C
ATOM 16 N7 G A2384 -109.534 -44.768 36.343 1.00 0.01 N
ATOM 17 C5 G A2384 -108.360 -45.481 36.231 1.00 0.01 C
ATOM 18 C6 G A2384 -107.280 -45.358 35.336 1.00 0.01 C
ATOM 19 O6 G A2384 -107.112 -44.566 34.417 1.00 0.01 O
ATOM 20 N1 G A2384 -106.286 -46.284 35.550 1.00 0.01 N
ATOM 21 C2 G A2384 -106.309 -47.230 36.515 1.00 0.01 C
ATOM 22 N2 G A2384 -105.246 -48.043 36.554 1.00 0.01 N
ATOM 23 N3 G A2384 -107.303 -47.350 37.382 1.00 0.01 N
ATOM 24 C4 G A2384 -108.289 -46.455 37.183 1.00 0.01 C
ATOM 25 P A A2385 -109.594 -48.456 43.395 1.00 0.01 P
ATOM 26 OP1 A A2385 -110.964 -48.314 43.910 1.00 0.01 O
ATOM 27 OP2 A A2385 -108.471 -47.956 44.222 1.00 0.01 O
ATOM 28 O5' A A2385 -109.341 -49.941 43.001 1.00 0.01 O
TER
ATOM 1 O3' G B2421 -101.630 -53.718 34.787 1.00 0.01 O
ATOM 2 P G B2422 -101.368 -52.417 33.923 1.00 0.01 P
ATOM 3 OP1 G B2422 -102.160 -52.532 32.707 1.00 0.01 O
ATOM 4 OP2 G B2422 -99.921 -52.274 33.816 1.00 0.01 O
ATOM 5 O5' G B2422 -101.946 -51.275 34.819 1.00 0.01 O
ATOM 6 C5' G B2422 -101.494 -49.948 34.672 1.00 0.01 C
ATOM 7 C4' G B2422 -101.625 -49.214 35.955 1.00 0.01 C
ATOM 8 O4' G B2422 -102.917 -49.484 36.522 1.00 0.01 O
ATOM 9 C3' G B2422 -100.682 -49.639 37.040 1.00 0.01 C
ATOM 10 O3' G B2422 -99.415 -49.072 36.886 1.00 0.01 O
ATOM 11 C2' G B2422 -101.392 -49.139 38.256 1.00 0.01 C
ATOM 12 O2' G B2422 -101.289 -47.733 38.317 1.00 0.01 O
ATOM 13 C1' G B2422 -102.824 -49.472 37.912 1.00 0.01 C
ATOM 14 N9 G B2422 -103.236 -50.775 38.435 1.00 0.01 N
ATOM 15 C8 G B2422 -102.484 -51.789 38.911 1.00 0.01 C
ATOM 16 N7 G B2422 -103.203 -52.768 39.329 1.00 0.01 N
ATOM 17 C5 G B2422 -104.494 -52.361 39.120 1.00 0.01 C
ATOM 18 C6 G B2422 -105.724 -53.008 39.372 1.00 0.01 C
ATOM 19 O6 G B2422 -105.908 -54.143 39.847 1.00 0.01 O
ATOM 20 N1 G B2422 -106.806 -52.190 39.007 1.00 0.01 N
ATOM 21 C2 G B2422 -106.689 -50.928 38.465 1.00 0.01 C
ATOM 22 N2 G B2422 -107.811 -50.274 38.174 1.00 0.00 N
ATOM 23 N3 G B2422 -105.549 -50.346 38.217 1.00 0.01 N
ATOM 24 C4 G B2422 -104.522 -51.121 38.581 1.00 0.01 C
ATOM 25 P A B2423 -98.257 -49.865 36.124 1.00 0.14 P
ATOM 26 OP1 A B2423 -97.541 -48.876 35.268 1.00 0.14 O
ATOM 27 OP2 A B2423 -98.864 -51.072 35.499 1.00 0.14 O
ATOM 28 O5' A B2423 -97.354 -50.308 37.300 1.00 0.14 O
TER
Atoms:
OP1: (-114.987,-48.155,41.404)
OP2: (-114.682,-45.848,40.353)
C3': (-110.691,-47.441,41.189)
C1': (-109.707,-47.161,39.111)
C5': (-112.516,-48.880,40.149)
O6: (-107.112,-44.566,34.417)
O4': (-110.560,-48.240,38.932)
C8: (-110.130,-45.330,37.364)
C2: (-106.309,-47.230,36.515)
C6: (-107.280,-45.358,35.336)
C5: (-108.360,-45.481,36.231)
C4: (-108.289,-46.455,37.183)
P: (-114.631,-47.329,40.228)
C4': (-111.056,-48.609,40.256)
C2': (-110.364,-46.352,40.195)
O2': (-109.512,-45.346,40.670)
N1: (-106.286,-46.284,35.550)
N2: (-105.246,-48.043,36.554)
N3: (-107.303,-47.350,37.382)
N7: (-109.534,-44.768,36.343)
N9: (-109.467,-46.415,37.876)
O5': (-113.214,-47.753,39.642)
O3': (-109.515,-47.727,41.954)
OP2: (-114.682,-45.848,40.353)
C3': (-110.691,-47.441,41.189)
C1': (-109.707,-47.161,39.111)
C5': (-112.516,-48.880,40.149)
O6: (-107.112,-44.566,34.417)
O4': (-110.560,-48.240,38.932)
C8: (-110.130,-45.330,37.364)
C2: (-106.309,-47.230,36.515)
C6: (-107.280,-45.358,35.336)
C5: (-108.360,-45.481,36.231)
C4: (-108.289,-46.455,37.183)
P: (-114.631,-47.329,40.228)
C4': (-111.056,-48.609,40.256)
C2': (-110.364,-46.352,40.195)
O2': (-109.512,-45.346,40.670)
N1: (-106.286,-46.284,35.550)
N2: (-105.246,-48.043,36.554)
N3: (-107.303,-47.350,37.382)
N7: (-109.534,-44.768,36.343)
N9: (-109.467,-46.415,37.876)
O5': (-113.214,-47.753,39.642)
O3': (-109.515,-47.727,41.954)
OP1: (-102.160,-52.532,32.707)
OP2: (-99.921,-52.274,33.816)
C3': (-100.682,-49.639,37.040)
C1': (-102.824,-49.472,37.912)
C5': (-101.494,-49.948,34.672)
O6: (-105.908,-54.143,39.847)
O4': (-102.917,-49.484,36.522)
C8: (-102.484,-51.789,38.911)
C2: (-106.689,-50.928,38.465)
C6: (-105.724,-53.008,39.372)
C5: (-104.494,-52.361,39.120)
C4: (-104.522,-51.121,38.581)
P: (-101.368,-52.417,33.923)
C4': (-101.625,-49.214,35.955)
C2': (-101.392,-49.139,38.256)
O2': (-101.289,-47.733,38.317)
N1: (-106.806,-52.190,39.007)
N2: (-107.811,-50.274,38.174)
N3: (-105.549,-50.346,38.217)
N7: (-103.203,-52.768,39.329)
N9: (-103.236,-50.775,38.435)
O5': (-101.946,-51.275,34.819)
O3': (-99.415,-49.072,36.886)
OP2: (-99.921,-52.274,33.816)
C3': (-100.682,-49.639,37.040)
C1': (-102.824,-49.472,37.912)
C5': (-101.494,-49.948,34.672)
O6: (-105.908,-54.143,39.847)
O4': (-102.917,-49.484,36.522)
C8: (-102.484,-51.789,38.911)
C2: (-106.689,-50.928,38.465)
C6: (-105.724,-53.008,39.372)
C5: (-104.494,-52.361,39.120)
C4: (-104.522,-51.121,38.581)
P: (-101.368,-52.417,33.923)
C4': (-101.625,-49.214,35.955)
C2': (-101.392,-49.139,38.256)
O2': (-101.289,-47.733,38.317)
N1: (-106.806,-52.190,39.007)
N2: (-107.811,-50.274,38.174)
N3: (-105.549,-50.346,38.217)
N7: (-103.203,-52.768,39.329)
N9: (-103.236,-50.775,38.435)
O5': (-101.946,-51.275,34.819)
O3': (-99.415,-49.072,36.886)
Image (generated by PyMOL):