Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B12:B68
Extra
PDB:
ATOM 1 O3' C A 11 -154.076 -67.188 18.030 1.00 4.44 O
ATOM 2 P G A 12 -153.384 -67.569 16.643 1.00 3.14 P
ATOM 3 OP1 G A 12 -153.087 -69.030 16.696 1.00 3.14 O
ATOM 4 OP2 G A 12 -152.261 -66.611 16.458 1.00 3.14 O
ATOM 5 O5' G A 12 -154.510 -67.279 15.566 1.00 3.14 O
ATOM 6 C5' G A 12 -155.870 -67.515 15.837 1.00 3.14 C
ATOM 7 C4' G A 12 -156.711 -66.846 14.808 1.00 3.14 C
ATOM 8 O4' G A 12 -156.496 -65.424 14.881 1.00 3.14 O
ATOM 9 C3' G A 12 -156.367 -67.172 13.379 1.00 3.14 C
ATOM 10 O3' G A 12 -156.911 -68.390 12.967 1.00 3.14 O
ATOM 11 C2' G A 12 -156.941 -65.985 12.644 1.00 3.14 C
ATOM 12 O2' G A 12 -158.346 -66.090 12.562 1.00 3.14 O
ATOM 13 C1' G A 12 -156.616 -64.862 13.601 1.00 3.14 C
ATOM 14 N9 G A 12 -155.359 -64.215 13.257 1.00 3.29 N
ATOM 15 C8 G A 12 -154.138 -64.596 13.705 1.00 3.29 C
ATOM 16 N7 G A 12 -153.202 -63.842 13.219 1.00 3.29 N
ATOM 17 C5 G A 12 -153.856 -62.920 12.421 1.00 3.29 C
ATOM 18 C6 G A 12 -153.348 -61.851 11.650 1.00 3.29 C
ATOM 19 O6 G A 12 -152.167 -61.512 11.523 1.00 3.29 O
ATOM 20 N1 G A 12 -154.359 -61.142 10.989 1.00 3.29 N
ATOM 21 C2 G A 12 -155.698 -61.430 11.056 1.00 3.29 C
ATOM 22 N2 G A 12 -156.496 -60.641 10.333 1.00 3.29 N
ATOM 23 N3 G A 12 -156.188 -62.428 11.775 1.00 3.29 N
ATOM 24 C4 G A 12 -155.212 -63.130 12.427 1.00 3.29 C
ATOM 25 P U A 13 -155.959 -69.629 12.643 1.00 8.13 P
ATOM 26 OP1 U A 13 -156.088 -70.589 13.784 1.00 8.13 O
ATOM 27 OP2 U A 13 -154.625 -69.092 12.316 1.00 8.13 O
ATOM 28 O5' U A 13 -156.625 -70.239 11.332 1.00 8.13 O
TER
ATOM 1 O3' C B 67 -155.609 -60.014 1.068 1.00 32.32 O
ATOM 2 P G B 68 -154.989 -61.442 1.498 1.00 6.05 P
ATOM 3 OP1 G B 68 -153.582 -61.441 1.059 1.00 6.05 O
ATOM 4 OP2 G B 68 -155.891 -62.518 0.986 1.00 6.05 O
ATOM 5 O5' G B 68 -155.066 -61.382 3.094 1.00 6.05 O
ATOM 6 C5' G B 68 -154.415 -60.337 3.817 1.00 6.05 C
ATOM 7 C4' G B 68 -154.721 -60.399 5.294 1.00 6.05 C
ATOM 8 O4' G B 68 -156.156 -60.464 5.500 1.00 6.05 O
ATOM 9 C3' G B 68 -154.227 -61.620 6.027 1.00 6.05 C
ATOM 10 O3' G B 68 -152.839 -61.597 6.286 1.00 6.05 O
ATOM 11 C2' G B 68 -155.109 -61.620 7.276 1.00 6.05 C
ATOM 12 O2' G B 68 -154.691 -60.625 8.198 1.00 6.05 O
ATOM 13 C1' G B 68 -156.441 -61.182 6.685 1.00 6.05 C
ATOM 14 N9 G B 68 -157.303 -62.317 6.348 1.00 5.92 N
ATOM 15 C8 G B 68 -157.711 -62.706 5.106 1.00 5.92 C
ATOM 16 N7 G B 68 -158.492 -63.755 5.125 1.00 5.92 N
ATOM 17 C5 G B 68 -158.592 -64.062 6.464 1.00 5.92 C
ATOM 18 C6 G B 68 -159.299 -65.096 7.103 1.00 5.92 C
ATOM 19 O6 G B 68 -160.013 -65.987 6.637 1.00 5.92 O
ATOM 20 N1 G B 68 -159.123 -65.028 8.458 1.00 5.92 N
ATOM 21 C2 G B 68 -158.383 -64.096 9.098 1.00 5.92 C
ATOM 22 N2 G B 68 -158.365 -64.223 10.429 1.00 5.92 N
ATOM 23 N3 G B 68 -157.721 -63.120 8.523 1.00 5.92 N
ATOM 24 C4 G B 68 -157.877 -63.174 7.216 1.00 5.92 C
ATOM 25 P C B 69 -151.983 -62.940 6.076 1.00 0.53 P
ATOM 26 OP1 C B 69 -150.640 -62.703 6.678 1.00 0.53 O
ATOM 27 OP2 C B 69 -152.086 -63.308 4.633 1.00 0.53 O
ATOM 28 O5' C B 69 -152.768 -63.999 6.958 1.00 0.53 O
TER
ATOM 2 P G A 12 -153.384 -67.569 16.643 1.00 3.14 P
ATOM 3 OP1 G A 12 -153.087 -69.030 16.696 1.00 3.14 O
ATOM 4 OP2 G A 12 -152.261 -66.611 16.458 1.00 3.14 O
ATOM 5 O5' G A 12 -154.510 -67.279 15.566 1.00 3.14 O
ATOM 6 C5' G A 12 -155.870 -67.515 15.837 1.00 3.14 C
ATOM 7 C4' G A 12 -156.711 -66.846 14.808 1.00 3.14 C
ATOM 8 O4' G A 12 -156.496 -65.424 14.881 1.00 3.14 O
ATOM 9 C3' G A 12 -156.367 -67.172 13.379 1.00 3.14 C
ATOM 10 O3' G A 12 -156.911 -68.390 12.967 1.00 3.14 O
ATOM 11 C2' G A 12 -156.941 -65.985 12.644 1.00 3.14 C
ATOM 12 O2' G A 12 -158.346 -66.090 12.562 1.00 3.14 O
ATOM 13 C1' G A 12 -156.616 -64.862 13.601 1.00 3.14 C
ATOM 14 N9 G A 12 -155.359 -64.215 13.257 1.00 3.29 N
ATOM 15 C8 G A 12 -154.138 -64.596 13.705 1.00 3.29 C
ATOM 16 N7 G A 12 -153.202 -63.842 13.219 1.00 3.29 N
ATOM 17 C5 G A 12 -153.856 -62.920 12.421 1.00 3.29 C
ATOM 18 C6 G A 12 -153.348 -61.851 11.650 1.00 3.29 C
ATOM 19 O6 G A 12 -152.167 -61.512 11.523 1.00 3.29 O
ATOM 20 N1 G A 12 -154.359 -61.142 10.989 1.00 3.29 N
ATOM 21 C2 G A 12 -155.698 -61.430 11.056 1.00 3.29 C
ATOM 22 N2 G A 12 -156.496 -60.641 10.333 1.00 3.29 N
ATOM 23 N3 G A 12 -156.188 -62.428 11.775 1.00 3.29 N
ATOM 24 C4 G A 12 -155.212 -63.130 12.427 1.00 3.29 C
ATOM 25 P U A 13 -155.959 -69.629 12.643 1.00 8.13 P
ATOM 26 OP1 U A 13 -156.088 -70.589 13.784 1.00 8.13 O
ATOM 27 OP2 U A 13 -154.625 -69.092 12.316 1.00 8.13 O
ATOM 28 O5' U A 13 -156.625 -70.239 11.332 1.00 8.13 O
TER
ATOM 1 O3' C B 67 -155.609 -60.014 1.068 1.00 32.32 O
ATOM 2 P G B 68 -154.989 -61.442 1.498 1.00 6.05 P
ATOM 3 OP1 G B 68 -153.582 -61.441 1.059 1.00 6.05 O
ATOM 4 OP2 G B 68 -155.891 -62.518 0.986 1.00 6.05 O
ATOM 5 O5' G B 68 -155.066 -61.382 3.094 1.00 6.05 O
ATOM 6 C5' G B 68 -154.415 -60.337 3.817 1.00 6.05 C
ATOM 7 C4' G B 68 -154.721 -60.399 5.294 1.00 6.05 C
ATOM 8 O4' G B 68 -156.156 -60.464 5.500 1.00 6.05 O
ATOM 9 C3' G B 68 -154.227 -61.620 6.027 1.00 6.05 C
ATOM 10 O3' G B 68 -152.839 -61.597 6.286 1.00 6.05 O
ATOM 11 C2' G B 68 -155.109 -61.620 7.276 1.00 6.05 C
ATOM 12 O2' G B 68 -154.691 -60.625 8.198 1.00 6.05 O
ATOM 13 C1' G B 68 -156.441 -61.182 6.685 1.00 6.05 C
ATOM 14 N9 G B 68 -157.303 -62.317 6.348 1.00 5.92 N
ATOM 15 C8 G B 68 -157.711 -62.706 5.106 1.00 5.92 C
ATOM 16 N7 G B 68 -158.492 -63.755 5.125 1.00 5.92 N
ATOM 17 C5 G B 68 -158.592 -64.062 6.464 1.00 5.92 C
ATOM 18 C6 G B 68 -159.299 -65.096 7.103 1.00 5.92 C
ATOM 19 O6 G B 68 -160.013 -65.987 6.637 1.00 5.92 O
ATOM 20 N1 G B 68 -159.123 -65.028 8.458 1.00 5.92 N
ATOM 21 C2 G B 68 -158.383 -64.096 9.098 1.00 5.92 C
ATOM 22 N2 G B 68 -158.365 -64.223 10.429 1.00 5.92 N
ATOM 23 N3 G B 68 -157.721 -63.120 8.523 1.00 5.92 N
ATOM 24 C4 G B 68 -157.877 -63.174 7.216 1.00 5.92 C
ATOM 25 P C B 69 -151.983 -62.940 6.076 1.00 0.53 P
ATOM 26 OP1 C B 69 -150.640 -62.703 6.678 1.00 0.53 O
ATOM 27 OP2 C B 69 -152.086 -63.308 4.633 1.00 0.53 O
ATOM 28 O5' C B 69 -152.768 -63.999 6.958 1.00 0.53 O
TER
Atoms:
OP1: (-153.087,-69.030,16.696)
OP2: (-152.261,-66.611,16.458)
C3': (-156.367,-67.172,13.379)
C1': (-156.616,-64.862,13.601)
C5': (-155.870,-67.515,15.837)
O6: (-152.167,-61.512,11.523)
O4': (-156.496,-65.424,14.881)
C8: (-154.138,-64.596,13.705)
C2: (-155.698,-61.430,11.056)
C6: (-153.348,-61.851,11.650)
C5: (-153.856,-62.920,12.421)
C4: (-155.212,-63.130,12.427)
P: (-153.384,-67.569,16.643)
C4': (-156.711,-66.846,14.808)
C2': (-156.941,-65.985,12.644)
O2': (-158.346,-66.090,12.562)
N1: (-154.359,-61.142,10.989)
N2: (-156.496,-60.641,10.333)
N3: (-156.188,-62.428,11.775)
N7: (-153.202,-63.842,13.219)
N9: (-155.359,-64.215,13.257)
O5': (-154.510,-67.279,15.566)
O3': (-156.911,-68.390,12.967)
OP2: (-152.261,-66.611,16.458)
C3': (-156.367,-67.172,13.379)
C1': (-156.616,-64.862,13.601)
C5': (-155.870,-67.515,15.837)
O6: (-152.167,-61.512,11.523)
O4': (-156.496,-65.424,14.881)
C8: (-154.138,-64.596,13.705)
C2: (-155.698,-61.430,11.056)
C6: (-153.348,-61.851,11.650)
C5: (-153.856,-62.920,12.421)
C4: (-155.212,-63.130,12.427)
P: (-153.384,-67.569,16.643)
C4': (-156.711,-66.846,14.808)
C2': (-156.941,-65.985,12.644)
O2': (-158.346,-66.090,12.562)
N1: (-154.359,-61.142,10.989)
N2: (-156.496,-60.641,10.333)
N3: (-156.188,-62.428,11.775)
N7: (-153.202,-63.842,13.219)
N9: (-155.359,-64.215,13.257)
O5': (-154.510,-67.279,15.566)
O3': (-156.911,-68.390,12.967)
OP1: (-153.582,-61.441,1.059)
OP2: (-155.891,-62.518,0.986)
C3': (-154.227,-61.620,6.027)
C1': (-156.441,-61.182,6.685)
C5': (-154.415,-60.337,3.817)
O6: (-160.013,-65.987,6.637)
O4': (-156.156,-60.464,5.500)
C8: (-157.711,-62.706,5.106)
C2: (-158.383,-64.096,9.098)
C6: (-159.299,-65.096,7.103)
C5: (-158.592,-64.062,6.464)
C4: (-157.877,-63.174,7.216)
P: (-154.989,-61.442,1.498)
C4': (-154.721,-60.399,5.294)
C2': (-155.109,-61.620,7.276)
O2': (-154.691,-60.625,8.198)
N1: (-159.123,-65.028,8.458)
N2: (-158.365,-64.223,10.429)
N3: (-157.721,-63.120,8.523)
N7: (-158.492,-63.755,5.125)
N9: (-157.303,-62.317,6.348)
O5': (-155.066,-61.382,3.094)
O3': (-152.839,-61.597,6.286)
OP2: (-155.891,-62.518,0.986)
C3': (-154.227,-61.620,6.027)
C1': (-156.441,-61.182,6.685)
C5': (-154.415,-60.337,3.817)
O6: (-160.013,-65.987,6.637)
O4': (-156.156,-60.464,5.500)
C8: (-157.711,-62.706,5.106)
C2: (-158.383,-64.096,9.098)
C6: (-159.299,-65.096,7.103)
C5: (-158.592,-64.062,6.464)
C4: (-157.877,-63.174,7.216)
P: (-154.989,-61.442,1.498)
C4': (-154.721,-60.399,5.294)
C2': (-155.109,-61.620,7.276)
O2': (-154.691,-60.625,8.198)
N1: (-159.123,-65.028,8.458)
N2: (-158.365,-64.223,10.429)
N3: (-157.721,-63.120,8.523)
N7: (-158.492,-63.755,5.125)
N9: (-157.303,-62.317,6.348)
O5': (-155.066,-61.382,3.094)
O3': (-152.839,-61.597,6.286)
Image (generated by PyMOL):