ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8T:A307:A328

Extra

PDB:
ATOM 1 O3' G A 306 -17.556 160.127 229.079 1.00 22.52 O
ATOM 2 P G A 307 -16.231 159.370 229.582 1.00 9.77 P
ATOM 3 OP1 G A 307 -16.245 158.006 228.987 1.00 9.77 O
ATOM 4 OP2 G A 307 -16.206 159.491 231.052 1.00 9.77 O
ATOM 5 O5' G A 307 -15.039 160.232 228.940 1.00 9.77 O
ATOM 6 C5' G A 307 -13.682 159.952 229.285 1.00 9.77 C
ATOM 7 C4' G A 307 -12.720 160.242 228.150 1.00 9.77 C
ATOM 8 O4' G A 307 -13.015 159.404 227.013 1.00 9.77 O
ATOM 9 C3' G A 307 -12.746 161.653 227.590 1.00 9.77 C
ATOM 10 O3' G A 307 -12.007 162.553 228.370 1.00 9.77 O
ATOM 11 C2' G A 307 -12.196 161.491 226.179 1.00 9.77 C
ATOM 12 O2' G A 307 -10.768 161.502 226.190 1.00 9.77 O
ATOM 13 C1' G A 307 -12.687 160.087 225.810 1.00 9.77 C
ATOM 14 N9 G A 307 -13.881 160.084 224.937 1.00 9.69 N
ATOM 15 C8 G A 307 -15.062 159.576 225.416 1.00 9.69 C
ATOM 16 N7 G A 307 -16.013 159.564 224.542 1.00 9.69 N
ATOM 17 C5 G A 307 -15.425 160.078 223.398 1.00 9.69 C
ATOM 18 C6 G A 307 -16.007 160.274 222.130 1.00 9.69 C
ATOM 19 O6 G A 307 -17.157 160.045 221.786 1.00 9.69 O
ATOM 20 N1 G A 307 -15.139 160.789 221.203 1.00 9.69 N
ATOM 21 C2 G A 307 -13.842 161.085 221.465 1.00 9.69 C
ATOM 22 N2 G A 307 -13.193 161.594 220.398 1.00 9.69 N
ATOM 23 N3 G A 307 -13.276 160.913 222.668 1.00 9.69 N
ATOM 24 C4 G A 307 -14.107 160.396 223.599 1.00 9.69 C
ATOM 25 P A A 308 -12.754 163.800 229.013 1.00 13.10 P
ATOM 26 OP1 A A 308 -11.936 164.269 230.163 1.00 13.10 O
ATOM 27 OP2 A A 308 -14.176 163.380 229.259 1.00 13.10 O
ATOM 28 O5' A A 308 -12.689 164.865 227.833 1.00 13.10 O
TER

ATOM 1 O3' U B 327 -8.773 169.126 216.163 1.00 19.70 O
ATOM 2 P G B 328 -9.185 168.243 217.426 1.00 16.24 P
ATOM 3 OP1 G B 328 -10.028 169.114 218.297 1.00 16.24 O
ATOM 4 OP2 G B 328 -7.935 167.652 217.977 1.00 16.24 O
ATOM 5 O5' G B 328 -10.059 167.093 216.769 1.00 16.24 O
ATOM 6 C5' G B 328 -11.471 167.146 216.781 1.00 16.24 C
ATOM 7 C4' G B 328 -12.044 165.982 217.532 1.00 16.24 C
ATOM 8 O4' G B 328 -11.028 165.445 218.441 1.00 16.24 O
ATOM 9 C3' G B 328 -13.245 166.322 218.402 1.00 16.24 C
ATOM 10 O3' G B 328 -14.131 165.219 218.434 1.00 16.24 O
ATOM 11 C2' G B 328 -12.612 166.497 219.775 1.00 16.24 C
ATOM 12 O2' G B 328 -13.498 166.351 220.861 1.00 16.24 O
ATOM 13 C1' G B 328 -11.574 165.393 219.746 1.00 16.24 C
ATOM 14 N9 G B 328 -10.511 165.539 220.753 1.00 16.42 N
ATOM 15 C8 G B 328 -9.689 166.600 220.987 1.00 16.42 C
ATOM 16 N7 G B 328 -8.886 166.402 221.991 1.00 16.42 N
ATOM 17 C5 G B 328 -9.205 165.149 222.472 1.00 16.42 C
ATOM 18 C6 G B 328 -8.678 164.390 223.551 1.00 16.42 C
ATOM 19 O6 G B 328 -7.798 164.635 224.361 1.00 16.42 O
ATOM 20 N1 G B 328 -9.274 163.166 223.703 1.00 16.42 N
ATOM 21 C2 G B 328 -10.293 162.721 222.909 1.00 16.42 C
ATOM 22 N2 G B 328 -10.733 161.493 223.237 1.00 16.42 N
ATOM 23 N3 G B 328 -10.811 163.416 221.895 1.00 16.42 N
ATOM 24 C4 G B 328 -10.217 164.615 221.731 1.00 16.42 C
ATOM 25 P A B 329 -15.008 164.856 217.146 1.00 22.22 P
ATOM 26 OP1 A B 329 -14.845 163.382 216.900 1.00 22.22 O
ATOM 27 OP2 A B 329 -14.616 165.821 216.081 1.00 22.22 O
ATOM 28 O5' A B 329 -16.500 165.154 217.635 1.00 22.22 O
TER

Atoms:
OP1: (-16.245,158.006,228.987)
OP2: (-16.206,159.491,231.052)
C3': (-12.746,161.653,227.590)
C1': (-12.687,160.087,225.810)
C5': (-13.682,159.952,229.285)
O6: (-17.157,160.045,221.786)
O4': (-13.015,159.404,227.013)
C8: (-15.062,159.576,225.416)
C2: (-13.842,161.085,221.465)
C6: (-16.007,160.274,222.130)
C5: (-15.425,160.078,223.398)
C4: (-14.107,160.396,223.599)
P: (-16.231,159.370,229.582)
C4': (-12.720,160.242,228.150)
C2': (-12.196,161.491,226.179)
O2': (-10.768,161.502,226.190)
N1: (-15.139,160.789,221.203)
N2: (-13.193,161.594,220.398)
N3: (-13.276,160.913,222.668)
N7: (-16.013,159.564,224.542)
N9: (-13.881,160.084,224.937)
O5': (-15.039,160.232,228.940)
O3': (-12.007,162.553,228.370)
OP1: (-10.028,169.114,218.297)
OP2: (-7.935,167.652,217.977)
C3': (-13.245,166.322,218.402)
C1': (-11.574,165.393,219.746)
C5': (-11.471,167.146,216.781)
O6: (-7.798,164.635,224.361)
O4': (-11.028,165.445,218.441)
C8: (-9.689,166.600,220.987)
C2: (-10.293,162.721,222.909)
C6: (-8.678,164.390,223.551)
C5: (-9.205,165.149,222.472)
C4: (-10.217,164.615,221.731)
P: (-9.185,168.243,217.426)
C4': (-12.044,165.982,217.532)
C2': (-12.612,166.497,219.775)
O2': (-13.498,166.351,220.861)
N1: (-9.274,163.166,223.703)
N2: (-10.733,161.493,223.237)
N3: (-10.811,163.416,221.895)
N7: (-8.886,166.402,221.991)
N9: (-10.511,165.539,220.753)
O5': (-10.059,167.093,216.769)
O3': (-14.131,165.219,218.434)
Image (generated by PyMOL):
PyMOL image
show in jmol