Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A480:A505
Extra
PDB:
ATOM 1 O3' A A 479 0.155 152.624 218.775 1.00 0.96 O
ATOM 2 P G A 480 -0.139 151.158 218.142 1.00 13.41 P
ATOM 3 OP1 G A 480 -1.544 150.792 218.478 1.00 13.41 O
ATOM 4 OP2 G A 480 0.956 150.256 218.614 1.00 13.41 O
ATOM 5 O5' G A 480 -0.011 151.408 216.564 1.00 13.41 O
ATOM 6 C5' G A 480 -1.172 151.583 215.743 1.00 13.41 C
ATOM 7 C4' G A 480 -1.631 150.287 215.073 1.00 13.41 C
ATOM 8 O4' G A 480 -2.727 150.586 214.147 1.00 13.41 O
ATOM 9 C3' G A 480 -0.580 149.539 214.221 1.00 13.41 C
ATOM 10 O3' G A 480 -0.861 148.134 214.251 1.00 13.41 O
ATOM 11 C2' G A 480 -0.885 150.063 212.829 1.00 13.41 C
ATOM 12 O2' G A 480 -0.397 149.269 211.788 1.00 13.41 O
ATOM 13 C1' G A 480 -2.400 150.060 212.876 1.00 13.41 C
ATOM 14 N9 G A 480 -3.046 150.859 211.849 1.00 13.77 N
ATOM 15 C8 G A 480 -2.563 151.881 211.065 1.00 13.77 C
ATOM 16 N7 G A 480 -3.464 152.364 210.231 1.00 13.77 N
ATOM 17 C5 G A 480 -4.593 151.580 210.494 1.00 13.77 C
ATOM 18 C6 G A 480 -5.884 151.591 209.922 1.00 13.77 C
ATOM 19 O6 G A 480 -6.298 152.318 209.045 1.00 13.77 O
ATOM 20 N1 G A 480 -6.726 150.651 210.461 1.00 13.77 N
ATOM 21 C2 G A 480 -6.356 149.791 211.455 1.00 13.77 C
ATOM 22 N2 G A 480 -7.308 148.946 211.868 1.00 13.77 N
ATOM 23 N3 G A 480 -5.159 149.742 212.013 1.00 13.77 N
ATOM 24 C4 G A 480 -4.339 150.656 211.479 1.00 13.77 C
ATOM 25 P A A 481 0.314 147.049 214.103 1.00 21.73 P
ATOM 26 OP1 A A 481 1.592 147.773 214.058 1.00 21.73 O
ATOM 27 OP2 A A 481 -0.039 146.166 212.977 1.00 21.73 O
ATOM 28 O5' A A 481 0.204 146.249 215.456 1.00 21.73 O
TER
ATOM 1 O3' A B 504 -14.299 147.076 213.726 1.00 7.40 O
ATOM 2 P G B 505 -13.313 145.834 213.728 1.00 7.29 P
ATOM 3 OP1 G B 505 -13.694 145.012 212.561 1.00 7.29 O
ATOM 4 OP2 G B 505 -13.345 145.214 215.087 1.00 7.29 O
ATOM 5 O5' G B 505 -11.904 146.511 213.489 1.00 7.29 O
ATOM 6 C5' G B 505 -11.443 146.796 212.178 1.00 7.29 C
ATOM 7 C4' G B 505 -10.143 146.098 211.905 1.00 7.29 C
ATOM 8 O4' G B 505 -9.185 146.478 212.931 1.00 7.29 O
ATOM 9 C3' G B 505 -10.220 144.579 211.951 1.00 7.29 C
ATOM 10 O3' G B 505 -9.240 144.025 211.071 1.00 7.29 O
ATOM 11 C2' G B 505 -9.844 144.289 213.385 1.00 7.29 C
ATOM 12 O2' G B 505 -9.400 142.978 213.601 1.00 7.29 O
ATOM 13 C1' G B 505 -8.741 145.327 213.603 1.00 7.29 C
ATOM 14 N9 G B 505 -8.495 145.689 215.002 1.00 7.28 N
ATOM 15 C8 G B 505 -9.188 145.247 216.096 1.00 7.28 C
ATOM 16 N7 G B 505 -8.744 145.725 217.235 1.00 7.28 N
ATOM 17 C5 G B 505 -7.683 146.525 216.869 1.00 7.28 C
ATOM 18 C6 G B 505 -6.828 147.291 217.679 1.00 7.28 C
ATOM 19 O6 G B 505 -6.852 147.403 218.902 1.00 7.28 O
ATOM 20 N1 G B 505 -5.872 147.978 216.971 1.00 7.28 N
ATOM 21 C2 G B 505 -5.771 147.926 215.624 1.00 7.28 C
ATOM 22 N2 G B 505 -4.773 148.667 215.112 1.00 7.28 N
ATOM 23 N3 G B 505 -6.577 147.205 214.847 1.00 7.28 N
ATOM 24 C4 G B 505 -7.513 146.520 215.520 1.00 7.28 C
ATOM 25 P A B 506 -9.681 143.409 209.644 1.00 7.47 P
ATOM 26 OP1 A B 506 -11.162 143.435 209.596 1.00 7.47 O
ATOM 27 OP2 A B 506 -8.994 142.108 209.510 1.00 7.47 O
ATOM 28 O5' A B 506 -9.099 144.449 208.577 1.00 7.47 O
TER
ATOM 2 P G A 480 -0.139 151.158 218.142 1.00 13.41 P
ATOM 3 OP1 G A 480 -1.544 150.792 218.478 1.00 13.41 O
ATOM 4 OP2 G A 480 0.956 150.256 218.614 1.00 13.41 O
ATOM 5 O5' G A 480 -0.011 151.408 216.564 1.00 13.41 O
ATOM 6 C5' G A 480 -1.172 151.583 215.743 1.00 13.41 C
ATOM 7 C4' G A 480 -1.631 150.287 215.073 1.00 13.41 C
ATOM 8 O4' G A 480 -2.727 150.586 214.147 1.00 13.41 O
ATOM 9 C3' G A 480 -0.580 149.539 214.221 1.00 13.41 C
ATOM 10 O3' G A 480 -0.861 148.134 214.251 1.00 13.41 O
ATOM 11 C2' G A 480 -0.885 150.063 212.829 1.00 13.41 C
ATOM 12 O2' G A 480 -0.397 149.269 211.788 1.00 13.41 O
ATOM 13 C1' G A 480 -2.400 150.060 212.876 1.00 13.41 C
ATOM 14 N9 G A 480 -3.046 150.859 211.849 1.00 13.77 N
ATOM 15 C8 G A 480 -2.563 151.881 211.065 1.00 13.77 C
ATOM 16 N7 G A 480 -3.464 152.364 210.231 1.00 13.77 N
ATOM 17 C5 G A 480 -4.593 151.580 210.494 1.00 13.77 C
ATOM 18 C6 G A 480 -5.884 151.591 209.922 1.00 13.77 C
ATOM 19 O6 G A 480 -6.298 152.318 209.045 1.00 13.77 O
ATOM 20 N1 G A 480 -6.726 150.651 210.461 1.00 13.77 N
ATOM 21 C2 G A 480 -6.356 149.791 211.455 1.00 13.77 C
ATOM 22 N2 G A 480 -7.308 148.946 211.868 1.00 13.77 N
ATOM 23 N3 G A 480 -5.159 149.742 212.013 1.00 13.77 N
ATOM 24 C4 G A 480 -4.339 150.656 211.479 1.00 13.77 C
ATOM 25 P A A 481 0.314 147.049 214.103 1.00 21.73 P
ATOM 26 OP1 A A 481 1.592 147.773 214.058 1.00 21.73 O
ATOM 27 OP2 A A 481 -0.039 146.166 212.977 1.00 21.73 O
ATOM 28 O5' A A 481 0.204 146.249 215.456 1.00 21.73 O
TER
ATOM 1 O3' A B 504 -14.299 147.076 213.726 1.00 7.40 O
ATOM 2 P G B 505 -13.313 145.834 213.728 1.00 7.29 P
ATOM 3 OP1 G B 505 -13.694 145.012 212.561 1.00 7.29 O
ATOM 4 OP2 G B 505 -13.345 145.214 215.087 1.00 7.29 O
ATOM 5 O5' G B 505 -11.904 146.511 213.489 1.00 7.29 O
ATOM 6 C5' G B 505 -11.443 146.796 212.178 1.00 7.29 C
ATOM 7 C4' G B 505 -10.143 146.098 211.905 1.00 7.29 C
ATOM 8 O4' G B 505 -9.185 146.478 212.931 1.00 7.29 O
ATOM 9 C3' G B 505 -10.220 144.579 211.951 1.00 7.29 C
ATOM 10 O3' G B 505 -9.240 144.025 211.071 1.00 7.29 O
ATOM 11 C2' G B 505 -9.844 144.289 213.385 1.00 7.29 C
ATOM 12 O2' G B 505 -9.400 142.978 213.601 1.00 7.29 O
ATOM 13 C1' G B 505 -8.741 145.327 213.603 1.00 7.29 C
ATOM 14 N9 G B 505 -8.495 145.689 215.002 1.00 7.28 N
ATOM 15 C8 G B 505 -9.188 145.247 216.096 1.00 7.28 C
ATOM 16 N7 G B 505 -8.744 145.725 217.235 1.00 7.28 N
ATOM 17 C5 G B 505 -7.683 146.525 216.869 1.00 7.28 C
ATOM 18 C6 G B 505 -6.828 147.291 217.679 1.00 7.28 C
ATOM 19 O6 G B 505 -6.852 147.403 218.902 1.00 7.28 O
ATOM 20 N1 G B 505 -5.872 147.978 216.971 1.00 7.28 N
ATOM 21 C2 G B 505 -5.771 147.926 215.624 1.00 7.28 C
ATOM 22 N2 G B 505 -4.773 148.667 215.112 1.00 7.28 N
ATOM 23 N3 G B 505 -6.577 147.205 214.847 1.00 7.28 N
ATOM 24 C4 G B 505 -7.513 146.520 215.520 1.00 7.28 C
ATOM 25 P A B 506 -9.681 143.409 209.644 1.00 7.47 P
ATOM 26 OP1 A B 506 -11.162 143.435 209.596 1.00 7.47 O
ATOM 27 OP2 A B 506 -8.994 142.108 209.510 1.00 7.47 O
ATOM 28 O5' A B 506 -9.099 144.449 208.577 1.00 7.47 O
TER
Atoms:
OP1: (-1.544,150.792,218.478)
OP2: (0.956,150.256,218.614)
C3': (-0.580,149.539,214.221)
C1': (-2.400,150.060,212.876)
C5': (-1.172,151.583,215.743)
O6: (-6.298,152.318,209.045)
O4': (-2.727,150.586,214.147)
C8: (-2.563,151.881,211.065)
C2: (-6.356,149.791,211.455)
C6: (-5.884,151.591,209.922)
C5: (-4.593,151.580,210.494)
C4: (-4.339,150.656,211.479)
P: (-0.139,151.158,218.142)
C4': (-1.631,150.287,215.073)
C2': (-0.885,150.063,212.829)
O2': (-0.397,149.269,211.788)
N1: (-6.726,150.651,210.461)
N2: (-7.308,148.946,211.868)
N3: (-5.159,149.742,212.013)
N7: (-3.464,152.364,210.231)
N9: (-3.046,150.859,211.849)
O5': (-0.011,151.408,216.564)
O3': (-0.861,148.134,214.251)
OP2: (0.956,150.256,218.614)
C3': (-0.580,149.539,214.221)
C1': (-2.400,150.060,212.876)
C5': (-1.172,151.583,215.743)
O6: (-6.298,152.318,209.045)
O4': (-2.727,150.586,214.147)
C8: (-2.563,151.881,211.065)
C2: (-6.356,149.791,211.455)
C6: (-5.884,151.591,209.922)
C5: (-4.593,151.580,210.494)
C4: (-4.339,150.656,211.479)
P: (-0.139,151.158,218.142)
C4': (-1.631,150.287,215.073)
C2': (-0.885,150.063,212.829)
O2': (-0.397,149.269,211.788)
N1: (-6.726,150.651,210.461)
N2: (-7.308,148.946,211.868)
N3: (-5.159,149.742,212.013)
N7: (-3.464,152.364,210.231)
N9: (-3.046,150.859,211.849)
O5': (-0.011,151.408,216.564)
O3': (-0.861,148.134,214.251)
OP1: (-13.694,145.012,212.561)
OP2: (-13.345,145.214,215.087)
C3': (-10.220,144.579,211.951)
C1': (-8.741,145.327,213.603)
C5': (-11.443,146.796,212.178)
O6: (-6.852,147.403,218.902)
O4': (-9.185,146.478,212.931)
C8: (-9.188,145.247,216.096)
C2: (-5.771,147.926,215.624)
C6: (-6.828,147.291,217.679)
C5: (-7.683,146.525,216.869)
C4: (-7.513,146.520,215.520)
P: (-13.313,145.834,213.728)
C4': (-10.143,146.098,211.905)
C2': (-9.844,144.289,213.385)
O2': (-9.400,142.978,213.601)
N1: (-5.872,147.978,216.971)
N2: (-4.773,148.667,215.112)
N3: (-6.577,147.205,214.847)
N7: (-8.744,145.725,217.235)
N9: (-8.495,145.689,215.002)
O5': (-11.904,146.511,213.489)
O3': (-9.240,144.025,211.071)
OP2: (-13.345,145.214,215.087)
C3': (-10.220,144.579,211.951)
C1': (-8.741,145.327,213.603)
C5': (-11.443,146.796,212.178)
O6: (-6.852,147.403,218.902)
O4': (-9.185,146.478,212.931)
C8: (-9.188,145.247,216.096)
C2: (-5.771,147.926,215.624)
C6: (-6.828,147.291,217.679)
C5: (-7.683,146.525,216.869)
C4: (-7.513,146.520,215.520)
P: (-13.313,145.834,213.728)
C4': (-10.143,146.098,211.905)
C2': (-9.844,144.289,213.385)
O2': (-9.400,142.978,213.601)
N1: (-5.872,147.978,216.971)
N2: (-4.773,148.667,215.112)
N3: (-6.577,147.205,214.847)
N7: (-8.744,145.725,217.235)
N9: (-8.495,145.689,215.002)
O5': (-11.904,146.511,213.489)
O3': (-9.240,144.025,211.071)
Image (generated by PyMOL):