ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1194:1215

Extra

PDB:
ATOM 1 O3' G A 193 103.044 19.256 88.037 1.00 49.87 O
ATOM 2 P G A 194 103.354 20.751 88.550 1.00 52.98 P
ATOM 3 OP1 G A 194 102.283 21.628 88.071 1.00 52.74 O
ATOM 4 OP2 G A 194 104.717 21.065 88.162 1.00 53.35 O
ATOM 5 O5' G A 194 103.232 20.609 90.125 1.00 53.25 O
ATOM 6 C5' G A 194 103.348 21.748 90.966 1.00 53.66 C
ATOM 7 C4' G A 194 102.651 21.549 92.297 1.00 53.72 C
ATOM 8 O4' G A 194 101.217 21.612 92.115 1.00 53.29 O
ATOM 9 C3' G A 194 102.907 20.225 92.998 1.00 53.72 C
ATOM 10 O3' G A 194 104.056 20.272 93.809 1.00 54.25 O
ATOM 11 C2' G A 194 101.616 19.980 93.791 1.00 53.50 C
ATOM 12 O2' G A 194 101.643 20.649 95.048 1.00 53.92 O
ATOM 13 C1' G A 194 100.578 20.661 92.922 1.00 53.13 C
ATOM 14 N9 G A 194 99.875 19.735 92.046 1.00 52.59 N
ATOM 15 C8 G A 194 99.981 19.713 90.697 1.00 52.32 C
ATOM 16 N7 G A 194 99.196 18.866 90.147 1.00 51.85 N
ATOM 17 C5 G A 194 98.518 18.327 91.220 1.00 51.81 C
ATOM 18 C6 G A 194 97.512 17.355 91.242 1.00 51.40 C
ATOM 19 O6 G A 194 97.037 16.804 90.227 1.00 50.99 O
ATOM 20 N1 G A 194 97.112 17.097 92.559 1.00 51.55 N
ATOM 21 C2 G A 194 97.602 17.708 93.685 1.00 52.02 C
ATOM 22 N2 G A 194 97.149 17.392 94.895 1.00 52.13 N
ATOM 23 N3 G A 194 98.508 18.627 93.649 1.00 52.40 N
ATOM 24 C4 G A 194 98.914 18.865 92.397 1.00 52.26 C
ATOM 25 P A A 195 105.042 19.009 93.924 1.00 52.63 P
ATOM 26 OP1 A A 195 106.265 19.487 94.674 1.00 53.25 O
ATOM 27 OP2 A A 195 105.212 18.465 92.549 1.00 52.27 O
ATOM 28 O5' A A 195 104.229 17.984 94.836 1.00 52.44 O
TER

ATOM 1 O3' U B 214 96.904 12.353 103.533 1.00 48.88 O
ATOM 2 P G B 215 97.481 13.414 102.467 1.00 49.82 P
ATOM 3 OP1 G B 215 98.850 12.953 101.992 1.00 50.00 O
ATOM 4 OP2 G B 215 97.347 14.733 103.097 1.00 50.14 O
ATOM 5 O5' G B 215 96.416 13.347 101.314 1.00 49.21 O
ATOM 6 C5' G B 215 96.600 12.563 100.198 1.00 48.85 C
ATOM 7 C4' G B 215 96.432 13.368 98.974 1.00 48.59 C
ATOM 8 O4' G B 215 96.920 14.732 99.203 1.00 48.96 O
ATOM 9 C3' G B 215 97.238 12.840 97.833 1.00 48.44 C
ATOM 10 O3' G B 215 96.611 13.239 96.645 1.00 48.03 O
ATOM 11 C2' G B 215 98.547 13.590 98.020 1.00 48.94 C
ATOM 12 O2' G B 215 99.401 13.580 96.917 1.00 48.89 O
ATOM 13 C1' G B 215 98.014 14.968 98.322 1.00 49.06 C
ATOM 14 N9 G B 215 98.993 15.869 98.949 1.00 49.61 N
ATOM 15 C8 G B 215 99.745 15.641 100.048 1.00 50.08 C
ATOM 16 N7 G B 215 100.559 16.632 100.354 1.00 50.54 N
ATOM 17 C5 G B 215 100.343 17.591 99.380 1.00 50.36 C
ATOM 18 C6 G B 215 100.914 18.890 99.188 1.00 50.68 C
ATOM 19 O6 G B 215 101.776 19.479 99.839 1.00 51.19 O
ATOM 20 N1 G B 215 100.407 19.545 98.077 1.00 50.35 N
ATOM 21 C2 G B 215 99.472 19.006 97.263 1.00 49.80 C
ATOM 22 N2 G B 215 99.111 19.767 96.225 1.00 49.57 N
ATOM 23 N3 G B 215 98.951 17.813 97.440 1.00 49.51 N
ATOM 24 C4 G B 215 99.405 17.131 98.501 1.00 49.80 C
ATOM 25 P A B 216 95.800 12.182 95.795 1.00 51.04 P
ATOM 26 OP1 A B 216 95.086 12.953 94.762 1.00 50.71 O
ATOM 27 OP2 A B 216 95.045 11.364 96.716 1.00 50.97 O
ATOM 28 O5' A B 216 96.953 11.321 95.135 1.00 51.08 O
TER

Atoms:
OP1: (102.283,21.628,88.071)
OP2: (104.717,21.065,88.162)
C3': (102.907,20.225,92.998)
C1': (100.578,20.661,92.922)
C5': (103.348,21.748,90.966)
O6: (97.037,16.804,90.227)
O4': (101.217,21.612,92.115)
C8: (99.981,19.713,90.697)
C2: (97.602,17.708,93.685)
C6: (97.512,17.355,91.242)
C5: (98.518,18.327,91.220)
C4: (98.914,18.865,92.397)
P: (103.354,20.751,88.550)
C4': (102.651,21.549,92.297)
C2': (101.616,19.980,93.791)
O2': (101.643,20.649,95.048)
N1: (97.112,17.097,92.559)
N2: (97.149,17.392,94.895)
N3: (98.508,18.627,93.649)
N7: (99.196,18.866,90.147)
N9: (99.875,19.735,92.046)
O5': (103.232,20.609,90.125)
O3': (104.056,20.272,93.809)
OP1: (98.850,12.953,101.992)
OP2: (97.347,14.733,103.097)
C3': (97.238,12.840,97.833)
C1': (98.014,14.968,98.322)
C5': (96.600,12.563,100.198)
O6: (101.776,19.479,99.839)
O4': (96.920,14.732,99.203)
C8: (99.745,15.641,100.048)
C2: (99.472,19.006,97.263)
C6: (100.914,18.890,99.188)
C5: (100.343,17.591,99.380)
C4: (99.405,17.131,98.501)
P: (97.481,13.414,102.467)
C4': (96.432,13.368,98.974)
C2': (98.547,13.590,98.020)
O2': (99.401,13.580,96.917)
N1: (100.407,19.545,98.077)
N2: (99.111,19.767,96.225)
N3: (98.951,17.813,97.440)
N7: (100.559,16.632,100.354)
N9: (98.993,15.869,98.949)
O5': (96.416,13.347,101.314)
O3': (96.611,13.239,96.645)
Image (generated by PyMOL):
PyMOL image
show in jmol