Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12513:12552
Extra
PDB:
ATOM 1 O3' C A2512 27.560 -51.012 65.476 1.00 47.07 O
ATOM 2 P G A2513 27.600 -51.577 66.972 1.00 44.23 P
ATOM 3 OP1 G A2513 28.462 -52.767 66.959 1.00 44.50 O
ATOM 4 OP2 G A2513 26.214 -51.714 67.445 1.00 44.33 O
ATOM 5 O5' G A2513 28.320 -50.406 67.753 1.00 43.88 O
ATOM 6 C5' G A2513 29.645 -50.021 67.421 1.00 43.72 C
ATOM 7 C4' G A2513 30.234 -49.085 68.448 1.00 43.45 C
ATOM 8 O4' G A2513 29.553 -47.795 68.395 1.00 43.17 O
ATOM 9 C3' G A2513 30.132 -49.548 69.901 1.00 43.57 C
ATOM 10 O3' G A2513 31.277 -49.061 70.609 1.00 43.42 O
ATOM 11 C2' G A2513 28.906 -48.792 70.372 1.00 43.44 C
ATOM 12 O2' G A2513 28.781 -48.682 71.772 1.00 43.44 O
ATOM 13 C1' G A2513 29.162 -47.450 69.701 1.00 43.10 C
ATOM 14 N9 G A2513 28.014 -46.561 69.623 1.00 42.95 N
ATOM 15 C8 G A2513 26.736 -46.883 69.321 1.00 43.09 C
ATOM 16 N7 G A2513 25.953 -45.837 69.313 1.00 42.90 N
ATOM 17 C5 G A2513 26.771 -44.782 69.601 1.00 42.61 C
ATOM 18 C6 G A2513 26.458 -43.421 69.732 1.00 42.34 C
ATOM 19 O6 G A2513 25.373 -42.837 69.602 1.00 42.28 O
ATOM 20 N1 G A2513 27.613 -42.699 70.051 1.00 42.13 N
ATOM 21 C2 G A2513 28.867 -43.222 70.215 1.00 42.17 C
ATOM 22 N2 G A2513 29.815 -42.339 70.532 1.00 41.95 N
ATOM 23 N3 G A2513 29.134 -44.505 70.081 1.00 42.44 N
ATOM 24 C4 G A2513 28.047 -45.215 69.784 1.00 42.64 C
ATOM 25 P A A2514 32.382 -50.082 71.186 1.00 46.73 P
ATOM 26 OP1 A A2514 32.958 -50.836 70.040 1.00 46.89 O
ATOM 27 OP2 A A2514 31.743 -50.845 72.300 1.00 46.96 O
ATOM 28 O5' A A2514 33.469 -49.102 71.769 1.00 46.46 O
TER
ATOM 1 O3' A B2551 34.533 -38.255 70.006 1.00 41.50 O
ATOM 2 P G B2552 33.130 -37.505 70.039 1.00 41.04 P
ATOM 3 OP1 G B2552 32.938 -37.014 68.801 1.00 40.95 O
ATOM 4 OP2 G B2552 33.123 -36.577 71.113 1.00 40.89 O
ATOM 5 O5' G B2552 32.102 -38.674 70.360 1.00 41.28 O
ATOM 6 C5' G B2552 30.890 -38.407 71.046 1.00 41.29 C
ATOM 7 C4' G B2552 30.784 -39.195 72.314 1.00 41.46 C
ATOM 8 O4' G B2552 31.143 -40.560 72.073 1.00 41.70 O
ATOM 9 C3' G B2552 31.708 -38.806 73.409 1.00 41.39 C
ATOM 10 O3' G B2552 31.286 -37.648 74.043 1.00 41.22 O
ATOM 11 C2' G B2552 31.667 -40.036 74.294 1.00 41.65 C
ATOM 12 O2' G B2552 30.440 -40.102 74.976 1.00 41.73 O
ATOM 13 C1' G B2552 31.661 -41.123 73.249 1.00 41.83 C
ATOM 14 N9 G B2552 32.993 -41.614 72.960 1.00 41.88 N
ATOM 15 C8 G B2552 34.172 -41.088 73.306 1.00 41.75 C
ATOM 16 N7 G B2552 35.145 -41.797 72.850 1.00 41.86 N
ATOM 17 C5 G B2552 34.547 -42.825 72.179 1.00 42.07 C
ATOM 18 C6 G B2552 35.120 -43.909 71.502 1.00 42.27 C
ATOM 19 O6 G B2552 36.320 -44.167 71.398 1.00 42.31 O
ATOM 20 N1 G B2552 34.146 -44.734 70.949 1.00 42.46 N
ATOM 21 C2 G B2552 32.810 -44.476 71.085 1.00 42.44 C
ATOM 22 N2 G B2552 31.983 -45.335 70.507 1.00 42.65 N
ATOM 23 N3 G B2552 32.287 -43.467 71.733 1.00 42.25 N
ATOM 24 C4 G B2552 33.218 -42.708 72.247 1.00 42.07 C
ATOM 25 P A B2553 32.251 -36.884 75.038 1.00 37.87 P
ATOM 26 OP1 A B2553 33.276 -36.293 74.235 1.00 37.71 O
ATOM 27 OP2 A B2553 32.650 -37.851 76.101 1.00 38.08 O
ATOM 28 O5' A B2553 31.293 -35.734 75.634 1.00 37.74 O
TER
ATOM 2 P G A2513 27.600 -51.577 66.972 1.00 44.23 P
ATOM 3 OP1 G A2513 28.462 -52.767 66.959 1.00 44.50 O
ATOM 4 OP2 G A2513 26.214 -51.714 67.445 1.00 44.33 O
ATOM 5 O5' G A2513 28.320 -50.406 67.753 1.00 43.88 O
ATOM 6 C5' G A2513 29.645 -50.021 67.421 1.00 43.72 C
ATOM 7 C4' G A2513 30.234 -49.085 68.448 1.00 43.45 C
ATOM 8 O4' G A2513 29.553 -47.795 68.395 1.00 43.17 O
ATOM 9 C3' G A2513 30.132 -49.548 69.901 1.00 43.57 C
ATOM 10 O3' G A2513 31.277 -49.061 70.609 1.00 43.42 O
ATOM 11 C2' G A2513 28.906 -48.792 70.372 1.00 43.44 C
ATOM 12 O2' G A2513 28.781 -48.682 71.772 1.00 43.44 O
ATOM 13 C1' G A2513 29.162 -47.450 69.701 1.00 43.10 C
ATOM 14 N9 G A2513 28.014 -46.561 69.623 1.00 42.95 N
ATOM 15 C8 G A2513 26.736 -46.883 69.321 1.00 43.09 C
ATOM 16 N7 G A2513 25.953 -45.837 69.313 1.00 42.90 N
ATOM 17 C5 G A2513 26.771 -44.782 69.601 1.00 42.61 C
ATOM 18 C6 G A2513 26.458 -43.421 69.732 1.00 42.34 C
ATOM 19 O6 G A2513 25.373 -42.837 69.602 1.00 42.28 O
ATOM 20 N1 G A2513 27.613 -42.699 70.051 1.00 42.13 N
ATOM 21 C2 G A2513 28.867 -43.222 70.215 1.00 42.17 C
ATOM 22 N2 G A2513 29.815 -42.339 70.532 1.00 41.95 N
ATOM 23 N3 G A2513 29.134 -44.505 70.081 1.00 42.44 N
ATOM 24 C4 G A2513 28.047 -45.215 69.784 1.00 42.64 C
ATOM 25 P A A2514 32.382 -50.082 71.186 1.00 46.73 P
ATOM 26 OP1 A A2514 32.958 -50.836 70.040 1.00 46.89 O
ATOM 27 OP2 A A2514 31.743 -50.845 72.300 1.00 46.96 O
ATOM 28 O5' A A2514 33.469 -49.102 71.769 1.00 46.46 O
TER
ATOM 1 O3' A B2551 34.533 -38.255 70.006 1.00 41.50 O
ATOM 2 P G B2552 33.130 -37.505 70.039 1.00 41.04 P
ATOM 3 OP1 G B2552 32.938 -37.014 68.801 1.00 40.95 O
ATOM 4 OP2 G B2552 33.123 -36.577 71.113 1.00 40.89 O
ATOM 5 O5' G B2552 32.102 -38.674 70.360 1.00 41.28 O
ATOM 6 C5' G B2552 30.890 -38.407 71.046 1.00 41.29 C
ATOM 7 C4' G B2552 30.784 -39.195 72.314 1.00 41.46 C
ATOM 8 O4' G B2552 31.143 -40.560 72.073 1.00 41.70 O
ATOM 9 C3' G B2552 31.708 -38.806 73.409 1.00 41.39 C
ATOM 10 O3' G B2552 31.286 -37.648 74.043 1.00 41.22 O
ATOM 11 C2' G B2552 31.667 -40.036 74.294 1.00 41.65 C
ATOM 12 O2' G B2552 30.440 -40.102 74.976 1.00 41.73 O
ATOM 13 C1' G B2552 31.661 -41.123 73.249 1.00 41.83 C
ATOM 14 N9 G B2552 32.993 -41.614 72.960 1.00 41.88 N
ATOM 15 C8 G B2552 34.172 -41.088 73.306 1.00 41.75 C
ATOM 16 N7 G B2552 35.145 -41.797 72.850 1.00 41.86 N
ATOM 17 C5 G B2552 34.547 -42.825 72.179 1.00 42.07 C
ATOM 18 C6 G B2552 35.120 -43.909 71.502 1.00 42.27 C
ATOM 19 O6 G B2552 36.320 -44.167 71.398 1.00 42.31 O
ATOM 20 N1 G B2552 34.146 -44.734 70.949 1.00 42.46 N
ATOM 21 C2 G B2552 32.810 -44.476 71.085 1.00 42.44 C
ATOM 22 N2 G B2552 31.983 -45.335 70.507 1.00 42.65 N
ATOM 23 N3 G B2552 32.287 -43.467 71.733 1.00 42.25 N
ATOM 24 C4 G B2552 33.218 -42.708 72.247 1.00 42.07 C
ATOM 25 P A B2553 32.251 -36.884 75.038 1.00 37.87 P
ATOM 26 OP1 A B2553 33.276 -36.293 74.235 1.00 37.71 O
ATOM 27 OP2 A B2553 32.650 -37.851 76.101 1.00 38.08 O
ATOM 28 O5' A B2553 31.293 -35.734 75.634 1.00 37.74 O
TER
Atoms:
OP1: (28.462,-52.767,66.959)
OP2: (26.214,-51.714,67.445)
C3': (30.132,-49.548,69.901)
C1': (29.162,-47.450,69.701)
C5': (29.645,-50.021,67.421)
O6: (25.373,-42.837,69.602)
O4': (29.553,-47.795,68.395)
C8: (26.736,-46.883,69.321)
C2: (28.867,-43.222,70.215)
C6: (26.458,-43.421,69.732)
C5: (26.771,-44.782,69.601)
C4: (28.047,-45.215,69.784)
P: (27.600,-51.577,66.972)
C4': (30.234,-49.085,68.448)
C2': (28.906,-48.792,70.372)
O2': (28.781,-48.682,71.772)
N1: (27.613,-42.699,70.051)
N2: (29.815,-42.339,70.532)
N3: (29.134,-44.505,70.081)
N7: (25.953,-45.837,69.313)
N9: (28.014,-46.561,69.623)
O5': (28.320,-50.406,67.753)
O3': (31.277,-49.061,70.609)
OP2: (26.214,-51.714,67.445)
C3': (30.132,-49.548,69.901)
C1': (29.162,-47.450,69.701)
C5': (29.645,-50.021,67.421)
O6: (25.373,-42.837,69.602)
O4': (29.553,-47.795,68.395)
C8: (26.736,-46.883,69.321)
C2: (28.867,-43.222,70.215)
C6: (26.458,-43.421,69.732)
C5: (26.771,-44.782,69.601)
C4: (28.047,-45.215,69.784)
P: (27.600,-51.577,66.972)
C4': (30.234,-49.085,68.448)
C2': (28.906,-48.792,70.372)
O2': (28.781,-48.682,71.772)
N1: (27.613,-42.699,70.051)
N2: (29.815,-42.339,70.532)
N3: (29.134,-44.505,70.081)
N7: (25.953,-45.837,69.313)
N9: (28.014,-46.561,69.623)
O5': (28.320,-50.406,67.753)
O3': (31.277,-49.061,70.609)
OP1: (32.938,-37.014,68.801)
OP2: (33.123,-36.577,71.113)
C3': (31.708,-38.806,73.409)
C1': (31.661,-41.123,73.249)
C5': (30.890,-38.407,71.046)
O6: (36.320,-44.167,71.398)
O4': (31.143,-40.560,72.073)
C8: (34.172,-41.088,73.306)
C2: (32.810,-44.476,71.085)
C6: (35.120,-43.909,71.502)
C5: (34.547,-42.825,72.179)
C4: (33.218,-42.708,72.247)
P: (33.130,-37.505,70.039)
C4': (30.784,-39.195,72.314)
C2': (31.667,-40.036,74.294)
O2': (30.440,-40.102,74.976)
N1: (34.146,-44.734,70.949)
N2: (31.983,-45.335,70.507)
N3: (32.287,-43.467,71.733)
N7: (35.145,-41.797,72.850)
N9: (32.993,-41.614,72.960)
O5': (32.102,-38.674,70.360)
O3': (31.286,-37.648,74.043)
OP2: (33.123,-36.577,71.113)
C3': (31.708,-38.806,73.409)
C1': (31.661,-41.123,73.249)
C5': (30.890,-38.407,71.046)
O6: (36.320,-44.167,71.398)
O4': (31.143,-40.560,72.073)
C8: (34.172,-41.088,73.306)
C2: (32.810,-44.476,71.085)
C6: (35.120,-43.909,71.502)
C5: (34.547,-42.825,72.179)
C4: (33.218,-42.708,72.247)
P: (33.130,-37.505,70.039)
C4': (30.784,-39.195,72.314)
C2': (31.667,-40.036,74.294)
O2': (30.440,-40.102,74.976)
N1: (34.146,-44.734,70.949)
N2: (31.983,-45.335,70.507)
N3: (32.287,-43.467,71.733)
N7: (35.145,-41.797,72.850)
N9: (32.993,-41.614,72.960)
O5': (32.102,-38.674,70.360)
O3': (31.286,-37.648,74.043)
Image (generated by PyMOL):