Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12653:12782
Extra
PDB:
ATOM 1 O3' A A2652 -5.658 26.229 11.452 1.00 61.14 O
ATOM 2 P G A2653 -5.021 26.825 12.810 1.00 64.02 P
ATOM 3 OP1 G A2653 -3.738 27.525 12.436 1.00 63.97 O
ATOM 4 OP2 G A2653 -4.956 25.700 13.794 1.00 63.41 O
ATOM 5 O5' G A2653 -6.124 27.902 13.283 1.00 64.40 O
ATOM 6 C5' G A2653 -6.094 29.257 12.848 1.00 64.86 C
ATOM 7 C4' G A2653 -7.047 30.108 13.654 1.00 65.05 C
ATOM 8 O4' G A2653 -8.374 29.530 13.605 1.00 65.30 O
ATOM 9 C3' G A2653 -6.745 30.204 15.134 1.00 64.47 C
ATOM 10 O3' G A2653 -5.784 31.196 15.444 1.00 64.35 O
ATOM 11 C2' G A2653 -8.103 30.463 15.759 1.00 64.70 C
ATOM 12 O2' G A2653 -8.425 31.832 15.683 1.00 65.16 O
ATOM 13 C1' G A2653 -9.023 29.684 14.836 1.00 65.09 C
ATOM 14 N9 G A2653 -9.306 28.349 15.349 1.00 64.68 N
ATOM 15 C8 G A2653 -8.795 27.198 14.840 1.00 64.44 C
ATOM 16 N7 G A2653 -9.187 26.135 15.476 1.00 64.10 N
ATOM 17 C5 G A2653 -10.027 26.622 16.458 1.00 64.11 C
ATOM 18 C6 G A2653 -10.772 25.927 17.450 1.00 63.84 C
ATOM 19 O6 G A2653 -10.824 24.697 17.630 1.00 63.53 O
ATOM 20 N1 G A2653 -11.514 26.822 18.235 1.00 64.00 N
ATOM 21 C2 G A2653 -11.518 28.198 18.071 1.00 64.38 C
ATOM 22 N2 G A2653 -12.277 28.935 18.896 1.00 64.51 N
ATOM 23 N3 G A2653 -10.829 28.838 17.149 1.00 64.63 N
ATOM 24 C4 G A2653 -10.114 27.994 16.384 1.00 64.48 C
ATOM 25 P A A2654 -4.579 30.831 16.429 1.00 60.54 P
ATOM 26 OP1 A A2654 -3.751 32.044 16.581 1.00 60.57 O
ATOM 27 OP2 A A2654 -3.981 29.635 15.896 1.00 60.26 O
ATOM 28 O5' A A2654 -5.315 30.509 17.797 1.00 60.21 O
TER
ATOM 1 O3' A B2781 -20.228 31.769 22.026 1.00 80.24 O
ATOM 2 P G B2782 -19.471 33.104 22.472 1.00 80.50 P
ATOM 3 OP1 G B2782 -20.300 33.757 23.519 1.00 80.64 O
ATOM 4 OP2 G B2782 -19.170 33.866 21.227 1.00 80.99 O
ATOM 5 O5' G B2782 -18.117 32.534 23.122 1.00 79.71 O
ATOM 6 C5' G B2782 -16.838 33.002 22.707 1.00 79.55 C
ATOM 7 C4' G B2782 -16.023 31.891 22.084 1.00 79.19 C
ATOM 8 O4' G B2782 -16.478 31.653 20.726 1.00 79.69 O
ATOM 9 C3' G B2782 -14.528 32.156 21.947 1.00 78.83 C
ATOM 10 O3' G B2782 -13.806 31.812 23.103 1.00 78.18 O
ATOM 11 C2' G B2782 -14.128 31.325 20.746 1.00 78.86 C
ATOM 12 O2' G B2782 -13.921 29.962 21.131 1.00 78.34 O
ATOM 13 C1' G B2782 -15.379 31.419 19.879 1.00 79.55 C
ATOM 14 N9 G B2782 -15.314 32.523 18.910 1.00 80.13 N
ATOM 15 C8 G B2782 -16.171 33.580 18.899 1.00 80.68 C
ATOM 16 N7 G B2782 -15.958 34.411 17.923 1.00 81.16 N
ATOM 17 C5 G B2782 -14.907 33.857 17.232 1.00 80.90 C
ATOM 18 C6 G B2782 -14.249 34.328 16.079 1.00 81.21 C
ATOM 19 O6 G B2782 -14.452 35.338 15.420 1.00 81.78 O
ATOM 20 N1 G B2782 -13.229 33.480 15.729 1.00 80.79 N
ATOM 21 C2 G B2782 -12.899 32.332 16.398 1.00 80.16 C
ATOM 22 N2 G B2782 -11.889 31.637 15.876 1.00 79.85 N
ATOM 23 N3 G B2782 -13.500 31.872 17.476 1.00 79.86 N
ATOM 24 C4 G B2782 -14.493 32.689 17.834 1.00 80.26 C
ATOM 25 P G B2783 -12.619 32.756 23.591 1.00 68.89 P
ATOM 26 OP1 G B2783 -11.797 31.960 24.554 1.00 68.16 O
ATOM 27 OP2 G B2783 -13.241 34.037 24.050 1.00 69.29 O
ATOM 28 O5' G B2783 -11.793 33.023 22.244 1.00 69.12 O
TER
ATOM 2 P G A2653 -5.021 26.825 12.810 1.00 64.02 P
ATOM 3 OP1 G A2653 -3.738 27.525 12.436 1.00 63.97 O
ATOM 4 OP2 G A2653 -4.956 25.700 13.794 1.00 63.41 O
ATOM 5 O5' G A2653 -6.124 27.902 13.283 1.00 64.40 O
ATOM 6 C5' G A2653 -6.094 29.257 12.848 1.00 64.86 C
ATOM 7 C4' G A2653 -7.047 30.108 13.654 1.00 65.05 C
ATOM 8 O4' G A2653 -8.374 29.530 13.605 1.00 65.30 O
ATOM 9 C3' G A2653 -6.745 30.204 15.134 1.00 64.47 C
ATOM 10 O3' G A2653 -5.784 31.196 15.444 1.00 64.35 O
ATOM 11 C2' G A2653 -8.103 30.463 15.759 1.00 64.70 C
ATOM 12 O2' G A2653 -8.425 31.832 15.683 1.00 65.16 O
ATOM 13 C1' G A2653 -9.023 29.684 14.836 1.00 65.09 C
ATOM 14 N9 G A2653 -9.306 28.349 15.349 1.00 64.68 N
ATOM 15 C8 G A2653 -8.795 27.198 14.840 1.00 64.44 C
ATOM 16 N7 G A2653 -9.187 26.135 15.476 1.00 64.10 N
ATOM 17 C5 G A2653 -10.027 26.622 16.458 1.00 64.11 C
ATOM 18 C6 G A2653 -10.772 25.927 17.450 1.00 63.84 C
ATOM 19 O6 G A2653 -10.824 24.697 17.630 1.00 63.53 O
ATOM 20 N1 G A2653 -11.514 26.822 18.235 1.00 64.00 N
ATOM 21 C2 G A2653 -11.518 28.198 18.071 1.00 64.38 C
ATOM 22 N2 G A2653 -12.277 28.935 18.896 1.00 64.51 N
ATOM 23 N3 G A2653 -10.829 28.838 17.149 1.00 64.63 N
ATOM 24 C4 G A2653 -10.114 27.994 16.384 1.00 64.48 C
ATOM 25 P A A2654 -4.579 30.831 16.429 1.00 60.54 P
ATOM 26 OP1 A A2654 -3.751 32.044 16.581 1.00 60.57 O
ATOM 27 OP2 A A2654 -3.981 29.635 15.896 1.00 60.26 O
ATOM 28 O5' A A2654 -5.315 30.509 17.797 1.00 60.21 O
TER
ATOM 1 O3' A B2781 -20.228 31.769 22.026 1.00 80.24 O
ATOM 2 P G B2782 -19.471 33.104 22.472 1.00 80.50 P
ATOM 3 OP1 G B2782 -20.300 33.757 23.519 1.00 80.64 O
ATOM 4 OP2 G B2782 -19.170 33.866 21.227 1.00 80.99 O
ATOM 5 O5' G B2782 -18.117 32.534 23.122 1.00 79.71 O
ATOM 6 C5' G B2782 -16.838 33.002 22.707 1.00 79.55 C
ATOM 7 C4' G B2782 -16.023 31.891 22.084 1.00 79.19 C
ATOM 8 O4' G B2782 -16.478 31.653 20.726 1.00 79.69 O
ATOM 9 C3' G B2782 -14.528 32.156 21.947 1.00 78.83 C
ATOM 10 O3' G B2782 -13.806 31.812 23.103 1.00 78.18 O
ATOM 11 C2' G B2782 -14.128 31.325 20.746 1.00 78.86 C
ATOM 12 O2' G B2782 -13.921 29.962 21.131 1.00 78.34 O
ATOM 13 C1' G B2782 -15.379 31.419 19.879 1.00 79.55 C
ATOM 14 N9 G B2782 -15.314 32.523 18.910 1.00 80.13 N
ATOM 15 C8 G B2782 -16.171 33.580 18.899 1.00 80.68 C
ATOM 16 N7 G B2782 -15.958 34.411 17.923 1.00 81.16 N
ATOM 17 C5 G B2782 -14.907 33.857 17.232 1.00 80.90 C
ATOM 18 C6 G B2782 -14.249 34.328 16.079 1.00 81.21 C
ATOM 19 O6 G B2782 -14.452 35.338 15.420 1.00 81.78 O
ATOM 20 N1 G B2782 -13.229 33.480 15.729 1.00 80.79 N
ATOM 21 C2 G B2782 -12.899 32.332 16.398 1.00 80.16 C
ATOM 22 N2 G B2782 -11.889 31.637 15.876 1.00 79.85 N
ATOM 23 N3 G B2782 -13.500 31.872 17.476 1.00 79.86 N
ATOM 24 C4 G B2782 -14.493 32.689 17.834 1.00 80.26 C
ATOM 25 P G B2783 -12.619 32.756 23.591 1.00 68.89 P
ATOM 26 OP1 G B2783 -11.797 31.960 24.554 1.00 68.16 O
ATOM 27 OP2 G B2783 -13.241 34.037 24.050 1.00 69.29 O
ATOM 28 O5' G B2783 -11.793 33.023 22.244 1.00 69.12 O
TER
Atoms:
OP1: (-3.738,27.525,12.436)
OP2: (-4.956,25.700,13.794)
C3': (-6.745,30.204,15.134)
C1': (-9.023,29.684,14.836)
C5': (-6.094,29.257,12.848)
O6: (-10.824,24.697,17.630)
O4': (-8.374,29.530,13.605)
C8: (-8.795,27.198,14.840)
C2: (-11.518,28.198,18.071)
C6: (-10.772,25.927,17.450)
C5: (-10.027,26.622,16.458)
C4: (-10.114,27.994,16.384)
P: (-5.021,26.825,12.810)
C4': (-7.047,30.108,13.654)
C2': (-8.103,30.463,15.759)
O2': (-8.425,31.832,15.683)
N1: (-11.514,26.822,18.235)
N2: (-12.277,28.935,18.896)
N3: (-10.829,28.838,17.149)
N7: (-9.187,26.135,15.476)
N9: (-9.306,28.349,15.349)
O5': (-6.124,27.902,13.283)
O3': (-5.784,31.196,15.444)
OP2: (-4.956,25.700,13.794)
C3': (-6.745,30.204,15.134)
C1': (-9.023,29.684,14.836)
C5': (-6.094,29.257,12.848)
O6: (-10.824,24.697,17.630)
O4': (-8.374,29.530,13.605)
C8: (-8.795,27.198,14.840)
C2: (-11.518,28.198,18.071)
C6: (-10.772,25.927,17.450)
C5: (-10.027,26.622,16.458)
C4: (-10.114,27.994,16.384)
P: (-5.021,26.825,12.810)
C4': (-7.047,30.108,13.654)
C2': (-8.103,30.463,15.759)
O2': (-8.425,31.832,15.683)
N1: (-11.514,26.822,18.235)
N2: (-12.277,28.935,18.896)
N3: (-10.829,28.838,17.149)
N7: (-9.187,26.135,15.476)
N9: (-9.306,28.349,15.349)
O5': (-6.124,27.902,13.283)
O3': (-5.784,31.196,15.444)
OP1: (-20.300,33.757,23.519)
OP2: (-19.170,33.866,21.227)
C3': (-14.528,32.156,21.947)
C1': (-15.379,31.419,19.879)
C5': (-16.838,33.002,22.707)
O6: (-14.452,35.338,15.420)
O4': (-16.478,31.653,20.726)
C8: (-16.171,33.580,18.899)
C2: (-12.899,32.332,16.398)
C6: (-14.249,34.328,16.079)
C5: (-14.907,33.857,17.232)
C4: (-14.493,32.689,17.834)
P: (-19.471,33.104,22.472)
C4': (-16.023,31.891,22.084)
C2': (-14.128,31.325,20.746)
O2': (-13.921,29.962,21.131)
N1: (-13.229,33.480,15.729)
N2: (-11.889,31.637,15.876)
N3: (-13.500,31.872,17.476)
N7: (-15.958,34.411,17.923)
N9: (-15.314,32.523,18.910)
O5': (-18.117,32.534,23.122)
O3': (-13.806,31.812,23.103)
OP2: (-19.170,33.866,21.227)
C3': (-14.528,32.156,21.947)
C1': (-15.379,31.419,19.879)
C5': (-16.838,33.002,22.707)
O6: (-14.452,35.338,15.420)
O4': (-16.478,31.653,20.726)
C8: (-16.171,33.580,18.899)
C2: (-12.899,32.332,16.398)
C6: (-14.249,34.328,16.079)
C5: (-14.907,33.857,17.232)
C4: (-14.493,32.689,17.834)
P: (-19.471,33.104,22.472)
C4': (-16.023,31.891,22.084)
C2': (-14.128,31.325,20.746)
O2': (-13.921,29.962,21.131)
N1: (-13.229,33.480,15.729)
N2: (-11.889,31.637,15.876)
N3: (-13.500,31.872,17.476)
N7: (-15.958,34.411,17.923)
N9: (-15.314,32.523,18.910)
O5': (-18.117,32.534,23.122)
O3': (-13.806,31.812,23.103)
Image (generated by PyMOL):