Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:013:014
Extra
PDB:
ATOM 1 O3' U A 12 34.304 148.456 73.884 1.00 33.22 O
ATOM 2 P G A 13 34.777 148.090 72.395 1.00 32.68 P
ATOM 3 OP1 G A 13 36.161 148.587 72.231 1.00 33.61 O
ATOM 4 OP2 G A 13 33.716 148.555 71.467 1.00 36.49 O
ATOM 5 O5' G A 13 34.813 146.498 72.354 1.00 34.80 O
ATOM 6 C5' G A 13 35.762 145.739 73.130 1.00 32.21 C
ATOM 7 C4' G A 13 35.410 144.270 73.069 1.00 34.75 C
ATOM 8 O4' G A 13 34.123 144.060 73.710 1.00 35.91 O
ATOM 9 C3' G A 13 35.240 143.710 71.664 1.00 33.23 C
ATOM 10 O3' G A 13 36.494 143.293 71.139 1.00 31.43 O
ATOM 11 C2' G A 13 34.287 142.543 71.884 1.00 33.92 C
ATOM 12 O2' G A 13 34.956 141.417 72.393 1.00 33.76 O
ATOM 13 C1' G A 13 33.373 143.098 72.982 1.00 34.95 C
ATOM 14 N9 G A 13 32.169 143.761 72.492 1.00 36.41 N
ATOM 15 C8 G A 13 32.081 145.036 71.988 1.00 35.16 C
ATOM 16 N7 G A 13 30.865 145.376 71.665 1.00 36.22 N
ATOM 17 C5 G A 13 30.103 144.257 71.963 1.00 36.15 C
ATOM 18 C6 G A 13 28.711 144.034 71.827 1.00 35.91 C
ATOM 19 O6 G A 13 27.845 144.812 71.417 1.00 36.97 O
ATOM 20 N1 G A 13 28.355 142.753 72.233 1.00 35.74 N
ATOM 21 C2 G A 13 29.223 141.812 72.716 1.00 35.46 C
ATOM 22 N2 G A 13 28.686 140.637 73.053 1.00 35.82 N
ATOM 23 N3 G A 13 30.524 142.009 72.858 1.00 37.28 N
ATOM 24 C4 G A 13 30.893 143.245 72.463 1.00 37.20 C
ATOM 25 P G A 14 36.840 143.541 69.587 1.00 33.26 P
ATOM 26 OP1 G A 14 38.312 143.507 69.420 1.00 31.73 O
ATOM 27 OP2 G A 14 36.085 144.740 69.143 1.00 34.96 O
ATOM 28 O5' G A 14 36.224 142.280 68.839 1.00 30.04 O
TER
ATOM 1 O3' G B 13 36.494 143.293 71.139 1.00 31.43 O
ATOM 2 P G B 14 36.840 143.541 69.587 1.00 33.26 P
ATOM 3 OP1 G B 14 38.312 143.507 69.420 1.00 31.73 O
ATOM 4 OP2 G B 14 36.085 144.740 69.143 1.00 34.96 O
ATOM 5 O5' G B 14 36.224 142.280 68.839 1.00 30.04 O
ATOM 6 C5' G B 14 36.315 140.959 69.399 1.00 28.59 C
ATOM 7 C4' G B 14 35.188 140.105 68.877 1.00 28.60 C
ATOM 8 O4' G B 14 33.925 140.748 69.222 1.00 31.09 O
ATOM 9 C3' G B 14 35.163 139.941 67.361 1.00 28.50 C
ATOM 10 O3' G B 14 34.541 138.702 67.062 1.00 30.00 O
ATOM 11 C2' G B 14 34.267 141.091 66.933 1.00 29.48 C
ATOM 12 O2' G B 14 33.667 140.932 65.674 1.00 30.61 O
ATOM 13 C1' G B 14 33.218 141.061 68.038 1.00 31.55 C
ATOM 14 N9 G B 14 32.512 142.329 68.206 1.00 32.64 N
ATOM 15 C8 G B 14 33.018 143.595 68.019 1.00 32.29 C
ATOM 16 N7 G B 14 32.117 144.531 68.150 1.00 33.41 N
ATOM 17 C5 G B 14 30.950 143.845 68.464 1.00 33.36 C
ATOM 18 C6 G B 14 29.642 144.326 68.694 1.00 31.68 C
ATOM 19 O6 G B 14 29.234 145.493 68.662 1.00 32.96 O
ATOM 20 N1 G B 14 28.761 143.292 68.983 1.00 31.42 N
ATOM 21 C2 G B 14 29.093 141.964 69.046 1.00 33.45 C
ATOM 22 N2 G B 14 28.096 141.118 69.360 1.00 31.46 N
ATOM 23 N3 G B 14 30.310 141.498 68.819 1.00 33.16 N
ATOM 24 C4 G B 14 31.182 142.488 68.533 1.00 32.99 C
ATOM 25 P A B 15 34.911 137.916 65.713 1.00 31.49 P
ATOM 26 OP1 A B 15 36.379 137.715 65.644 1.00 31.59 O
ATOM 27 OP2 A B 15 34.207 138.551 64.580 1.00 32.37 O
ATOM 28 O5' A B 15 34.239 136.494 65.937 1.00 33.13 O
TER
ATOM 2 P G A 13 34.777 148.090 72.395 1.00 32.68 P
ATOM 3 OP1 G A 13 36.161 148.587 72.231 1.00 33.61 O
ATOM 4 OP2 G A 13 33.716 148.555 71.467 1.00 36.49 O
ATOM 5 O5' G A 13 34.813 146.498 72.354 1.00 34.80 O
ATOM 6 C5' G A 13 35.762 145.739 73.130 1.00 32.21 C
ATOM 7 C4' G A 13 35.410 144.270 73.069 1.00 34.75 C
ATOM 8 O4' G A 13 34.123 144.060 73.710 1.00 35.91 O
ATOM 9 C3' G A 13 35.240 143.710 71.664 1.00 33.23 C
ATOM 10 O3' G A 13 36.494 143.293 71.139 1.00 31.43 O
ATOM 11 C2' G A 13 34.287 142.543 71.884 1.00 33.92 C
ATOM 12 O2' G A 13 34.956 141.417 72.393 1.00 33.76 O
ATOM 13 C1' G A 13 33.373 143.098 72.982 1.00 34.95 C
ATOM 14 N9 G A 13 32.169 143.761 72.492 1.00 36.41 N
ATOM 15 C8 G A 13 32.081 145.036 71.988 1.00 35.16 C
ATOM 16 N7 G A 13 30.865 145.376 71.665 1.00 36.22 N
ATOM 17 C5 G A 13 30.103 144.257 71.963 1.00 36.15 C
ATOM 18 C6 G A 13 28.711 144.034 71.827 1.00 35.91 C
ATOM 19 O6 G A 13 27.845 144.812 71.417 1.00 36.97 O
ATOM 20 N1 G A 13 28.355 142.753 72.233 1.00 35.74 N
ATOM 21 C2 G A 13 29.223 141.812 72.716 1.00 35.46 C
ATOM 22 N2 G A 13 28.686 140.637 73.053 1.00 35.82 N
ATOM 23 N3 G A 13 30.524 142.009 72.858 1.00 37.28 N
ATOM 24 C4 G A 13 30.893 143.245 72.463 1.00 37.20 C
ATOM 25 P G A 14 36.840 143.541 69.587 1.00 33.26 P
ATOM 26 OP1 G A 14 38.312 143.507 69.420 1.00 31.73 O
ATOM 27 OP2 G A 14 36.085 144.740 69.143 1.00 34.96 O
ATOM 28 O5' G A 14 36.224 142.280 68.839 1.00 30.04 O
TER
ATOM 1 O3' G B 13 36.494 143.293 71.139 1.00 31.43 O
ATOM 2 P G B 14 36.840 143.541 69.587 1.00 33.26 P
ATOM 3 OP1 G B 14 38.312 143.507 69.420 1.00 31.73 O
ATOM 4 OP2 G B 14 36.085 144.740 69.143 1.00 34.96 O
ATOM 5 O5' G B 14 36.224 142.280 68.839 1.00 30.04 O
ATOM 6 C5' G B 14 36.315 140.959 69.399 1.00 28.59 C
ATOM 7 C4' G B 14 35.188 140.105 68.877 1.00 28.60 C
ATOM 8 O4' G B 14 33.925 140.748 69.222 1.00 31.09 O
ATOM 9 C3' G B 14 35.163 139.941 67.361 1.00 28.50 C
ATOM 10 O3' G B 14 34.541 138.702 67.062 1.00 30.00 O
ATOM 11 C2' G B 14 34.267 141.091 66.933 1.00 29.48 C
ATOM 12 O2' G B 14 33.667 140.932 65.674 1.00 30.61 O
ATOM 13 C1' G B 14 33.218 141.061 68.038 1.00 31.55 C
ATOM 14 N9 G B 14 32.512 142.329 68.206 1.00 32.64 N
ATOM 15 C8 G B 14 33.018 143.595 68.019 1.00 32.29 C
ATOM 16 N7 G B 14 32.117 144.531 68.150 1.00 33.41 N
ATOM 17 C5 G B 14 30.950 143.845 68.464 1.00 33.36 C
ATOM 18 C6 G B 14 29.642 144.326 68.694 1.00 31.68 C
ATOM 19 O6 G B 14 29.234 145.493 68.662 1.00 32.96 O
ATOM 20 N1 G B 14 28.761 143.292 68.983 1.00 31.42 N
ATOM 21 C2 G B 14 29.093 141.964 69.046 1.00 33.45 C
ATOM 22 N2 G B 14 28.096 141.118 69.360 1.00 31.46 N
ATOM 23 N3 G B 14 30.310 141.498 68.819 1.00 33.16 N
ATOM 24 C4 G B 14 31.182 142.488 68.533 1.00 32.99 C
ATOM 25 P A B 15 34.911 137.916 65.713 1.00 31.49 P
ATOM 26 OP1 A B 15 36.379 137.715 65.644 1.00 31.59 O
ATOM 27 OP2 A B 15 34.207 138.551 64.580 1.00 32.37 O
ATOM 28 O5' A B 15 34.239 136.494 65.937 1.00 33.13 O
TER
Atoms:
OP1: (36.161,148.587,72.231)
OP2: (33.716,148.555,71.467)
C3': (35.240,143.710,71.664)
C1': (33.373,143.098,72.982)
C5': (35.762,145.739,73.130)
O6: (27.845,144.812,71.417)
O4': (34.123,144.060,73.710)
C8: (32.081,145.036,71.988)
C2: (29.223,141.812,72.716)
C6: (28.711,144.034,71.827)
C5: (30.103,144.257,71.963)
C4: (30.893,143.245,72.463)
P: (34.777,148.090,72.395)
C4': (35.410,144.270,73.069)
C2': (34.287,142.543,71.884)
O2': (34.956,141.417,72.393)
N1: (28.355,142.753,72.233)
N2: (28.686,140.637,73.053)
N3: (30.524,142.009,72.858)
N7: (30.865,145.376,71.665)
N9: (32.169,143.761,72.492)
O5': (34.813,146.498,72.354)
O3': (36.494,143.293,71.139)
OP2: (33.716,148.555,71.467)
C3': (35.240,143.710,71.664)
C1': (33.373,143.098,72.982)
C5': (35.762,145.739,73.130)
O6: (27.845,144.812,71.417)
O4': (34.123,144.060,73.710)
C8: (32.081,145.036,71.988)
C2: (29.223,141.812,72.716)
C6: (28.711,144.034,71.827)
C5: (30.103,144.257,71.963)
C4: (30.893,143.245,72.463)
P: (34.777,148.090,72.395)
C4': (35.410,144.270,73.069)
C2': (34.287,142.543,71.884)
O2': (34.956,141.417,72.393)
N1: (28.355,142.753,72.233)
N2: (28.686,140.637,73.053)
N3: (30.524,142.009,72.858)
N7: (30.865,145.376,71.665)
N9: (32.169,143.761,72.492)
O5': (34.813,146.498,72.354)
O3': (36.494,143.293,71.139)
OP1: (38.312,143.507,69.420)
OP2: (36.085,144.740,69.143)
C3': (35.163,139.941,67.361)
C1': (33.218,141.061,68.038)
C5': (36.315,140.959,69.399)
O6: (29.234,145.493,68.662)
O4': (33.925,140.748,69.222)
C8: (33.018,143.595,68.019)
C2: (29.093,141.964,69.046)
C6: (29.642,144.326,68.694)
C5: (30.950,143.845,68.464)
C4: (31.182,142.488,68.533)
P: (36.840,143.541,69.587)
C4': (35.188,140.105,68.877)
C2': (34.267,141.091,66.933)
O2': (33.667,140.932,65.674)
N1: (28.761,143.292,68.983)
N2: (28.096,141.118,69.360)
N3: (30.310,141.498,68.819)
N7: (32.117,144.531,68.150)
N9: (32.512,142.329,68.206)
O5': (36.224,142.280,68.839)
O3': (34.541,138.702,67.062)
OP2: (36.085,144.740,69.143)
C3': (35.163,139.941,67.361)
C1': (33.218,141.061,68.038)
C5': (36.315,140.959,69.399)
O6: (29.234,145.493,68.662)
O4': (33.925,140.748,69.222)
C8: (33.018,143.595,68.019)
C2: (29.093,141.964,69.046)
C6: (29.642,144.326,68.694)
C5: (30.950,143.845,68.464)
C4: (31.182,142.488,68.533)
P: (36.840,143.541,69.587)
C4': (35.188,140.105,68.877)
C2': (34.267,141.091,66.933)
O2': (33.667,140.932,65.674)
N1: (28.761,143.292,68.983)
N2: (28.096,141.118,69.360)
N3: (30.310,141.498,68.819)
N7: (32.117,144.531,68.150)
N9: (32.512,142.329,68.206)
O5': (36.224,142.280,68.839)
O3': (34.541,138.702,67.062)
Image (generated by PyMOL):