ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:974:975

Extra

PDB:
ATOM 1 O3' G A 73 37.522 52.279 128.126 1.00 76.78 O
ATOM 2 P G A 74 37.579 53.888 128.105 1.00 75.63 P
ATOM 3 OP1 G A 74 36.738 54.339 129.242 1.00 75.48 O
ATOM 4 OP2 G A 74 37.270 54.365 126.728 1.00 75.96 O
ATOM 5 O5' G A 74 39.093 54.253 128.459 1.00 73.51 O
ATOM 6 C5' G A 74 39.482 54.412 129.831 1.00 71.14 C
ATOM 7 C4' G A 74 40.942 54.790 129.963 1.00 68.90 C
ATOM 8 O4' G A 74 41.785 53.838 129.267 1.00 67.96 O
ATOM 9 C3' G A 74 41.444 56.094 129.376 1.00 67.71 C
ATOM 10 O3' G A 74 41.047 57.244 130.107 1.00 67.61 O
ATOM 11 C2' G A 74 42.945 55.882 129.513 1.00 68.13 C
ATOM 12 O2' G A 74 43.392 56.028 130.846 1.00 67.95 O
ATOM 13 C1' G A 74 43.074 54.411 129.110 1.00 67.78 C
ATOM 14 N9 G A 74 43.494 54.302 127.716 1.00 69.00 N
ATOM 15 C8 G A 74 42.739 53.951 126.620 1.00 69.98 C
ATOM 16 N7 G A 74 43.410 54.003 125.499 1.00 69.63 N
ATOM 17 C5 G A 74 44.687 54.398 125.881 1.00 69.94 C
ATOM 18 C6 G A 74 45.858 54.631 125.104 1.00 70.05 C
ATOM 19 O6 G A 74 46.012 54.512 123.881 1.00 70.80 O
ATOM 20 N1 G A 74 46.924 55.038 125.899 1.00 69.03 N
ATOM 21 C2 G A 74 46.878 55.193 127.263 1.00 68.94 C
ATOM 22 N2 G A 74 48.000 55.609 127.853 1.00 69.27 N
ATOM 23 N3 G A 74 45.807 54.964 127.995 1.00 68.91 N
ATOM 24 C4 G A 74 44.755 54.577 127.246 1.00 69.22 C
ATOM 25 P G A 75 40.963 58.671 129.358 1.00 67.33 P
ATOM 26 OP1 G A 75 40.553 59.682 130.360 1.00 68.67 O
ATOM 27 OP2 G A 75 40.164 58.512 128.114 1.00 67.50 O
ATOM 28 O5' G A 75 42.471 58.986 128.954 1.00 66.91 O
TER

ATOM 1 O3' G B 74 41.047 57.244 130.107 1.00 67.61 O
ATOM 2 P G B 75 40.963 58.671 129.358 1.00 67.33 P
ATOM 3 OP1 G B 75 40.553 59.682 130.360 1.00 68.67 O
ATOM 4 OP2 G B 75 40.164 58.512 128.114 1.00 67.50 O
ATOM 5 O5' G B 75 42.471 58.986 128.954 1.00 66.91 O
ATOM 6 C5' G B 75 43.473 59.229 129.960 1.00 66.42 C
ATOM 7 C4' G B 75 44.823 59.444 129.316 1.00 66.45 C
ATOM 8 O4' G B 75 45.189 58.253 128.565 1.00 65.52 O
ATOM 9 C3' G B 75 44.913 60.573 128.299 1.00 66.13 C
ATOM 10 O3' G B 75 45.086 61.839 128.947 1.00 66.80 O
ATOM 11 C2' G B 75 46.105 60.134 127.458 1.00 65.98 C
ATOM 12 O2' G B 75 47.343 60.357 128.108 1.00 66.49 O
ATOM 13 C1' G B 75 45.866 58.625 127.377 1.00 65.02 C
ATOM 14 N9 G B 75 45.027 58.232 126.247 1.00 64.63 N
ATOM 15 C8 G B 75 43.655 58.135 126.238 1.00 64.96 C
ATOM 16 N7 G B 75 43.175 57.735 125.093 1.00 65.06 N
ATOM 17 C5 G B 75 44.296 57.559 124.295 1.00 64.22 C
ATOM 18 C6 G B 75 44.401 57.121 122.955 1.00 63.95 C
ATOM 19 O6 G B 75 43.501 56.766 122.186 1.00 63.76 O
ATOM 20 N1 G B 75 45.722 57.106 122.527 1.00 63.97 N
ATOM 21 C2 G B 75 46.805 57.450 123.292 1.00 62.97 C
ATOM 22 N2 G B 75 47.999 57.368 122.686 1.00 61.72 N
ATOM 23 N3 G B 75 46.723 57.842 124.552 1.00 63.10 N
ATOM 24 C4 G B 75 45.447 57.875 124.986 1.00 63.93 C
ATOM 25 P A B 76 45.151 63.203 128.079 1.00 66.95 P
ATOM 26 OP1 A B 76 45.935 62.957 126.839 1.00 66.99 O
ATOM 27 OP2 A B 76 45.570 64.285 129.003 1.00 67.70 O
ATOM 28 O5' A B 76 43.648 63.547 127.685 1.00 65.25 O
TER

Atoms:
OP1: (36.738,54.339,129.242)
OP2: (37.270,54.365,126.728)
C3': (41.444,56.094,129.376)
C1': (43.074,54.411,129.110)
C5': (39.482,54.412,129.831)
O6: (46.012,54.512,123.881)
O4': (41.785,53.838,129.267)
C8: (42.739,53.951,126.620)
C2: (46.878,55.193,127.263)
C6: (45.858,54.631,125.104)
C5: (44.687,54.398,125.881)
C4: (44.755,54.577,127.246)
P: (37.579,53.888,128.105)
C4': (40.942,54.790,129.963)
C2': (42.945,55.882,129.513)
O2': (43.392,56.028,130.846)
N1: (46.924,55.038,125.899)
N2: (48.000,55.609,127.853)
N3: (45.807,54.964,127.995)
N7: (43.410,54.003,125.499)
N9: (43.494,54.302,127.716)
O5': (39.093,54.253,128.459)
O3': (41.047,57.244,130.107)
OP1: (40.553,59.682,130.360)
OP2: (40.164,58.512,128.114)
C3': (44.913,60.573,128.299)
C1': (45.866,58.625,127.377)
C5': (43.473,59.229,129.960)
O6: (43.501,56.766,122.186)
O4': (45.189,58.253,128.565)
C8: (43.655,58.135,126.238)
C2: (46.805,57.450,123.292)
C6: (44.401,57.121,122.955)
C5: (44.296,57.559,124.295)
C4: (45.447,57.875,124.986)
P: (40.963,58.671,129.358)
C4': (44.823,59.444,129.316)
C2': (46.105,60.134,127.458)
O2': (47.343,60.357,128.108)
N1: (45.722,57.106,122.527)
N2: (47.999,57.368,122.686)
N3: (46.723,57.842,124.552)
N7: (43.175,57.735,125.093)
N9: (45.027,58.232,126.247)
O5': (42.471,58.986,128.954)
O3': (45.086,61.839,128.947)
Image (generated by PyMOL):
PyMOL image
show in jmol