ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1J1U:B26:B27

Extra

PDB:
ATOM 1 O3' C A 25 4.807 23.035 104.780 1.00 74.21 O
ATOM 2 P G A 26 5.158 23.592 106.243 1.00 67.06 P
ATOM 3 OP1 G A 26 6.356 22.873 106.741 1.00 81.00 O
ATOM 4 OP2 G A 26 3.936 23.598 107.064 1.00 75.91 O
ATOM 5 O5' G A 26 5.597 25.101 105.986 1.00 73.94 O
ATOM 6 C5' G A 26 6.604 25.413 105.015 1.00 69.20 C
ATOM 7 C4' G A 26 6.588 26.889 104.717 1.00 67.22 C
ATOM 8 O4' G A 26 5.378 27.188 103.970 1.00 73.80 O
ATOM 9 C3' G A 26 6.480 27.795 105.928 1.00 68.89 C
ATOM 10 O3' G A 26 7.721 28.100 106.548 1.00 68.86 O
ATOM 11 C2' G A 26 5.904 29.058 105.315 1.00 65.92 C
ATOM 12 O2' G A 26 6.886 29.807 104.653 1.00 71.01 O
ATOM 13 C1' G A 26 4.902 28.480 104.315 1.00 66.22 C
ATOM 14 N9 G A 26 3.574 28.342 104.913 1.00 67.58 N
ATOM 15 C8 G A 26 2.968 27.179 105.323 1.00 65.97 C
ATOM 16 N7 G A 26 1.831 27.384 105.932 1.00 64.39 N
ATOM 17 C5 G A 26 1.655 28.758 105.876 1.00 64.13 C
ATOM 18 C6 G A 26 0.579 29.576 106.357 1.00 59.83 C
ATOM 19 O6 G A 26 -0.469 29.229 106.876 1.00 59.20 O
ATOM 20 N1 G A 26 0.825 30.915 106.143 1.00 52.30 N
ATOM 21 C2 G A 26 1.927 31.417 105.481 1.00 52.09 C
ATOM 22 N2 G A 26 1.974 32.752 105.358 1.00 45.07 N
ATOM 23 N3 G A 26 2.899 30.667 104.983 1.00 56.76 N
ATOM 24 C4 G A 26 2.709 29.361 105.232 1.00 57.48 C
ATOM 25 P G A 27 7.780 28.261 108.144 1.00 75.94 P
ATOM 26 OP1 G A 27 9.186 28.197 108.606 1.00 86.62 O
ATOM 27 OP2 G A 27 6.777 27.287 108.679 1.00 78.53 O
ATOM 28 O5' G A 27 7.253 29.729 108.474 1.00 76.26 O
TER

ATOM 1 O3' G B 26 7.721 28.100 106.548 1.00 68.86 O
ATOM 2 P G B 27 7.780 28.261 108.144 1.00 75.94 P
ATOM 3 OP1 G B 27 9.186 28.197 108.606 1.00 86.62 O
ATOM 4 OP2 G B 27 6.777 27.287 108.679 1.00 78.53 O
ATOM 5 O5' G B 27 7.253 29.729 108.474 1.00 76.26 O
ATOM 6 C5' G B 27 7.581 30.839 107.658 1.00 66.41 C
ATOM 7 C4' G B 27 6.633 31.966 107.954 1.00 66.15 C
ATOM 8 O4' G B 27 5.321 31.713 107.372 1.00 53.67 O
ATOM 9 C3' G B 27 6.331 32.162 109.431 1.00 63.69 C
ATOM 10 O3' G B 27 7.332 32.922 110.064 1.00 67.65 O
ATOM 11 C2' G B 27 5.031 32.961 109.396 1.00 61.48 C
ATOM 12 O2' G B 27 5.249 34.319 109.078 1.00 58.69 O
ATOM 13 C1' G B 27 4.321 32.297 108.225 1.00 58.44 C
ATOM 14 N9 G B 27 3.430 31.245 108.678 1.00 55.98 N
ATOM 15 C8 G B 27 3.612 29.900 108.474 1.00 48.54 C
ATOM 16 N7 G B 27 2.621 29.183 108.907 1.00 50.92 N
ATOM 17 C5 G B 27 1.737 30.098 109.449 1.00 52.03 C
ATOM 18 C6 G B 27 0.504 29.881 110.034 1.00 47.40 C
ATOM 19 O6 G B 27 -0.079 28.809 110.147 1.00 49.89 O
ATOM 20 N1 G B 27 -0.074 31.073 110.498 1.00 44.90 N
ATOM 21 C2 G B 27 0.489 32.317 110.371 1.00 53.68 C
ATOM 22 N2 G B 27 -0.213 33.334 110.896 1.00 54.83 N
ATOM 23 N3 G B 27 1.662 32.537 109.778 1.00 53.07 N
ATOM 24 C4 G B 27 2.226 31.381 109.347 1.00 50.46 C
ATOM 25 P C B 28 7.646 32.674 111.618 1.00 60.07 P
ATOM 26 OP1 C B 28 8.892 33.412 111.934 1.00 67.84 O
ATOM 27 OP2 C B 28 7.562 31.216 111.812 1.00 66.19 O
ATOM 28 O5' C B 28 6.431 33.320 112.408 1.00 64.58 O
TER

Atoms:
OP1: (6.356,22.873,106.741)
OP2: (3.936,23.598,107.064)
C3': (6.480,27.795,105.928)
C1': (4.902,28.480,104.315)
C5': (6.604,25.413,105.015)
O6: (-0.469,29.229,106.876)
O4': (5.378,27.188,103.970)
C8: (2.968,27.179,105.323)
C2: (1.927,31.417,105.481)
C6: (0.579,29.576,106.357)
C5: (1.655,28.758,105.876)
C4: (2.709,29.361,105.232)
P: (5.158,23.592,106.243)
C4': (6.588,26.889,104.717)
C2': (5.904,29.058,105.315)
O2': (6.886,29.807,104.653)
N1: (0.825,30.915,106.143)
N2: (1.974,32.752,105.358)
N3: (2.899,30.667,104.983)
N7: (1.831,27.384,105.932)
N9: (3.574,28.342,104.913)
O5': (5.597,25.101,105.986)
O3': (7.721,28.100,106.548)
OP1: (9.186,28.197,108.606)
OP2: (6.777,27.287,108.679)
C3': (6.331,32.162,109.431)
C1': (4.321,32.297,108.225)
C5': (7.581,30.839,107.658)
O6: (-0.079,28.809,110.147)
O4': (5.321,31.713,107.372)
C8: (3.612,29.900,108.474)
C2: (0.489,32.317,110.371)
C6: (0.504,29.881,110.034)
C5: (1.737,30.098,109.449)
C4: (2.226,31.381,109.347)
P: (7.780,28.261,108.144)
C4': (6.633,31.966,107.954)
C2': (5.031,32.961,109.396)
O2': (5.249,34.319,109.078)
N1: (-0.074,31.073,110.498)
N2: (-0.213,33.334,110.896)
N3: (1.662,32.537,109.778)
N7: (2.621,29.183,108.907)
N9: (3.430,31.245,108.678)
O5': (7.253,29.729,108.474)
O3': (7.332,32.922,110.064)
Image (generated by PyMOL):
PyMOL image
show in jmol