ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A2666:A2667

Extra

PDB:
ATOM 1 O3' G A2665 40.165 -80.488 32.135 1.00 35.60 O
ATOM 2 P G A2666 39.322 -79.390 32.946 1.00 51.60 P
ATOM 3 OP1 G A2666 39.716 -78.045 32.418 1.00 62.78 O
ATOM 4 OP2 G A2666 39.517 -79.663 34.376 1.00 59.53 O
ATOM 5 O5' G A2666 37.818 -79.728 32.532 1.00 47.34 O
ATOM 6 C5' G A2666 37.376 -79.599 31.188 1.00 35.06 C
ATOM 7 C4' G A2666 35.923 -79.978 31.033 1.00 36.67 C
ATOM 8 O4' G A2666 35.760 -81.405 31.182 1.00 39.40 O
ATOM 9 C3' G A2666 34.953 -79.409 32.052 1.00 40.65 C
ATOM 10 O3' G A2666 34.624 -78.056 31.814 1.00 44.22 O
ATOM 11 C2' G A2666 33.771 -80.346 31.900 1.00 47.53 C
ATOM 12 O2' G A2666 33.045 -80.044 30.720 1.00 48.96 O
ATOM 13 C1' G A2666 34.476 -81.682 31.696 1.00 45.49 C
ATOM 14 N9 G A2666 34.605 -82.430 32.967 1.00 55.25 N
ATOM 15 C8 G A2666 35.727 -82.695 33.723 1.00 53.60 C
ATOM 16 N7 G A2666 35.476 -83.388 34.805 1.00 56.74 N
ATOM 17 C5 G A2666 34.102 -83.575 34.762 1.00 54.53 C
ATOM 18 C6 G A2666 33.251 -84.240 35.653 1.00 54.23 C
ATOM 19 O6 G A2666 33.541 -84.818 36.694 1.00 64.83 O
ATOM 20 N1 G A2666 31.941 -84.214 35.250 1.00 52.96 N
ATOM 21 C2 G A2666 31.485 -83.615 34.123 1.00 56.43 C
ATOM 22 N2 G A2666 30.157 -83.707 33.921 1.00 58.94 N
ATOM 23 N3 G A2666 32.266 -82.984 33.268 1.00 57.89 N
ATOM 24 C4 G A2666 33.554 -83.003 33.649 1.00 55.96 C
ATOM 25 P G A2667 34.185 -77.115 33.024 1.00 45.68 P
ATOM 26 OP1 G A2667 33.829 -75.792 32.450 1.00 83.91 O
ATOM 27 OP2 G A2667 35.259 -77.187 34.031 1.00 81.96 O
ATOM 28 O5' G A2667 32.873 -77.845 33.566 1.00 61.47 O
TER

ATOM 1 O3' G B2666 34.624 -78.056 31.814 1.00 44.22 O
ATOM 2 P G B2667 34.185 -77.115 33.024 1.00 45.68 P
ATOM 3 OP1 G B2667 33.829 -75.792 32.450 1.00 83.91 O
ATOM 4 OP2 G B2667 35.259 -77.187 34.031 1.00 81.96 O
ATOM 5 O5' G B2667 32.873 -77.845 33.566 1.00 61.47 O
ATOM 6 C5' G B2667 31.631 -77.751 32.867 1.00 52.43 C
ATOM 7 C4' G B2667 30.538 -78.592 33.512 1.00 50.18 C
ATOM 8 O4' G B2667 31.012 -79.940 33.747 1.00 48.13 O
ATOM 9 C3' G B2667 30.038 -78.151 34.879 1.00 43.82 C
ATOM 10 O3' G B2667 29.132 -77.069 34.812 1.00 43.03 O
ATOM 11 C2' G B2667 29.400 -79.427 35.399 1.00 50.80 C
ATOM 12 O2' G B2667 28.152 -79.637 34.771 1.00 50.84 O
ATOM 13 C1' G B2667 30.359 -80.483 34.873 1.00 50.88 C
ATOM 14 N9 G B2667 31.369 -80.860 35.869 1.00 56.34 N
ATOM 15 C8 G B2667 32.674 -80.479 35.832 1.00 56.81 C
ATOM 16 N7 G B2667 33.365 -80.957 36.816 1.00 61.64 N
ATOM 17 C5 G B2667 32.469 -81.711 37.550 1.00 60.53 C
ATOM 18 C6 G B2667 32.678 -82.472 38.734 1.00 63.49 C
ATOM 19 O6 G B2667 33.744 -82.622 39.373 1.00 62.33 O
ATOM 20 N1 G B2667 31.496 -83.096 39.133 1.00 53.70 N
ATOM 21 C2 G B2667 30.298 -82.987 38.481 1.00 52.32 C
ATOM 22 N2 G B2667 29.268 -83.657 39.009 1.00 55.61 N
ATOM 23 N3 G B2667 30.106 -82.271 37.390 1.00 59.26 N
ATOM 24 C4 G B2667 31.226 -81.664 36.974 1.00 58.32 C
ATOM 25 P C B2668 29.028 -76.015 36.022 1.00 46.33 P
ATOM 26 OP1 C B2668 27.939 -75.066 35.692 1.00 44.27 O
ATOM 27 OP2 C B2668 30.384 -75.480 36.241 1.00 45.88 O
ATOM 28 O5' C B2668 28.597 -76.917 37.256 1.00 46.73 O
TER

Atoms:
OP1: (39.716,-78.045,32.418)
OP2: (39.517,-79.663,34.376)
C3': (34.953,-79.409,32.052)
C1': (34.476,-81.682,31.696)
C5': (37.376,-79.599,31.188)
O6: (33.541,-84.818,36.694)
O4': (35.760,-81.405,31.182)
C8: (35.727,-82.695,33.723)
C2: (31.485,-83.615,34.123)
C6: (33.251,-84.240,35.653)
C5: (34.102,-83.575,34.762)
C4: (33.554,-83.003,33.649)
P: (39.322,-79.390,32.946)
C4': (35.923,-79.978,31.033)
C2': (33.771,-80.346,31.900)
O2': (33.045,-80.044,30.720)
N1: (31.941,-84.214,35.250)
N2: (30.157,-83.707,33.921)
N3: (32.266,-82.984,33.268)
N7: (35.476,-83.388,34.805)
N9: (34.605,-82.430,32.967)
O5': (37.818,-79.728,32.532)
O3': (34.624,-78.056,31.814)
OP1: (33.829,-75.792,32.450)
OP2: (35.259,-77.187,34.031)
C3': (30.038,-78.151,34.879)
C1': (30.359,-80.483,34.873)
C5': (31.631,-77.751,32.867)
O6: (33.744,-82.622,39.373)
O4': (31.012,-79.940,33.747)
C8: (32.674,-80.479,35.832)
C2: (30.298,-82.987,38.481)
C6: (32.678,-82.472,38.734)
C5: (32.469,-81.711,37.550)
C4: (31.226,-81.664,36.974)
P: (34.185,-77.115,33.024)
C4': (30.538,-78.592,33.512)
C2': (29.400,-79.427,35.399)
O2': (28.152,-79.637,34.771)
N1: (31.496,-83.096,39.133)
N2: (29.268,-83.657,39.009)
N3: (30.106,-82.271,37.390)
N7: (33.365,-80.957,36.816)
N9: (31.369,-80.860,35.869)
O5': (32.873,-77.845,33.566)
O3': (29.132,-77.069,34.812)
Image (generated by PyMOL):
PyMOL image
show in jmol