Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:H5:H6
Extra
PDB:
ATOM 1 O3' A A 4 -3.341 57.903 68.759 1.00 59.85 O
ATOM 2 P G A 5 -4.388 57.971 69.975 1.00 61.32 P
ATOM 3 OP1 G A 5 -5.761 57.935 69.407 1.00 60.42 O
ATOM 4 OP2 G A 5 -3.983 59.102 70.846 1.00 61.52 O
ATOM 5 O5' G A 5 -4.132 56.611 70.764 1.00 62.17 O
ATOM 6 C5' G A 5 -4.324 55.357 70.118 1.00 61.07 C
ATOM 7 C4' G A 5 -3.762 54.232 70.955 1.00 59.54 C
ATOM 8 O4' G A 5 -2.324 54.377 71.086 1.00 61.20 O
ATOM 9 C3' G A 5 -4.230 54.146 72.397 1.00 57.78 C
ATOM 10 O3' G A 5 -5.511 53.539 72.491 1.00 53.78 O
ATOM 11 C2' G A 5 -3.152 53.266 73.023 1.00 59.53 C
ATOM 12 O2' G A 5 -3.356 51.889 72.780 1.00 58.70 O
ATOM 13 C1' G A 5 -1.899 53.737 72.280 1.00 61.58 C
ATOM 14 N9 G A 5 -1.090 54.666 73.063 1.00 63.10 N
ATOM 15 C8 G A 5 -1.093 56.039 73.009 1.00 63.84 C
ATOM 16 N7 G A 5 -0.259 56.586 73.854 1.00 64.60 N
ATOM 17 C5 G A 5 0.330 55.508 74.502 1.00 63.78 C
ATOM 18 C6 G A 5 1.316 55.473 75.526 1.00 63.59 C
ATOM 19 O6 G A 5 1.884 56.419 76.087 1.00 63.16 O
ATOM 20 N1 G A 5 1.627 54.166 75.889 1.00 63.39 N
ATOM 21 C2 G A 5 1.066 53.039 75.341 1.00 63.03 C
ATOM 22 N2 G A 5 1.499 51.865 75.823 1.00 63.67 N
ATOM 23 N3 G A 5 0.149 53.059 74.391 1.00 62.93 N
ATOM 24 C4 G A 5 -0.170 54.317 74.022 1.00 63.24 C
ATOM 25 P G A 6 -6.144 53.240 73.937 1.00 50.72 P
ATOM 26 OP1 G A 6 -7.608 53.042 73.780 1.00 51.80 O
ATOM 27 OP2 G A 6 -5.640 54.284 74.865 1.00 49.05 O
ATOM 28 O5' G A 6 -5.487 51.849 74.351 1.00 48.86 O
TER
ATOM 1 O3' G B 5 -5.511 53.539 72.491 1.00 53.78 O
ATOM 2 P G B 6 -6.144 53.240 73.937 1.00 50.72 P
ATOM 3 OP1 G B 6 -7.608 53.042 73.780 1.00 51.80 O
ATOM 4 OP2 G B 6 -5.640 54.284 74.865 1.00 49.05 O
ATOM 5 O5' G B 6 -5.487 51.849 74.351 1.00 48.86 O
ATOM 6 C5' G B 6 -5.800 51.228 75.593 1.00 43.49 C
ATOM 7 C4' G B 6 -4.669 50.324 76.019 1.00 39.92 C
ATOM 8 O4' G B 6 -3.429 51.076 75.991 1.00 38.01 O
ATOM 9 C3' G B 6 -4.805 49.739 77.420 1.00 39.81 C
ATOM 10 O3' G B 6 -4.265 48.423 77.412 1.00 43.03 O
ATOM 11 C2' G B 6 -3.919 50.660 78.257 1.00 37.59 C
ATOM 12 O2' G B 6 -3.391 50.037 79.410 1.00 36.38 O
ATOM 13 C1' G B 6 -2.820 51.034 77.262 1.00 36.59 C
ATOM 14 N9 G B 6 -2.230 52.348 77.505 1.00 37.54 N
ATOM 15 C8 G B 6 -2.671 53.545 76.994 1.00 37.64 C
ATOM 16 N7 G B 6 -1.956 54.564 77.384 1.00 36.51 N
ATOM 17 C5 G B 6 -0.983 54.010 78.201 1.00 35.96 C
ATOM 18 C6 G B 6 0.075 54.628 78.910 1.00 36.71 C
ATOM 19 O6 G B 6 0.371 55.828 78.958 1.00 35.97 O
ATOM 20 N1 G B 6 0.829 53.696 79.616 1.00 36.94 N
ATOM 21 C2 G B 6 0.595 52.344 79.638 1.00 35.53 C
ATOM 22 N2 G B 6 1.438 51.611 80.381 1.00 35.04 N
ATOM 23 N3 G B 6 -0.391 51.753 78.981 1.00 36.42 N
ATOM 24 C4 G B 6 -1.136 52.641 78.288 1.00 36.63 C
ATOM 25 P U B 7 -5.239 47.166 77.172 1.00 43.29 P
ATOM 26 OP1 U B 7 -4.542 45.935 77.628 1.00 44.50 O
ATOM 27 OP2 U B 7 -5.730 47.254 75.773 1.00 43.68 O
ATOM 28 O5' U B 7 -6.473 47.434 78.143 1.00 42.31 O
TER
ATOM 2 P G A 5 -4.388 57.971 69.975 1.00 61.32 P
ATOM 3 OP1 G A 5 -5.761 57.935 69.407 1.00 60.42 O
ATOM 4 OP2 G A 5 -3.983 59.102 70.846 1.00 61.52 O
ATOM 5 O5' G A 5 -4.132 56.611 70.764 1.00 62.17 O
ATOM 6 C5' G A 5 -4.324 55.357 70.118 1.00 61.07 C
ATOM 7 C4' G A 5 -3.762 54.232 70.955 1.00 59.54 C
ATOM 8 O4' G A 5 -2.324 54.377 71.086 1.00 61.20 O
ATOM 9 C3' G A 5 -4.230 54.146 72.397 1.00 57.78 C
ATOM 10 O3' G A 5 -5.511 53.539 72.491 1.00 53.78 O
ATOM 11 C2' G A 5 -3.152 53.266 73.023 1.00 59.53 C
ATOM 12 O2' G A 5 -3.356 51.889 72.780 1.00 58.70 O
ATOM 13 C1' G A 5 -1.899 53.737 72.280 1.00 61.58 C
ATOM 14 N9 G A 5 -1.090 54.666 73.063 1.00 63.10 N
ATOM 15 C8 G A 5 -1.093 56.039 73.009 1.00 63.84 C
ATOM 16 N7 G A 5 -0.259 56.586 73.854 1.00 64.60 N
ATOM 17 C5 G A 5 0.330 55.508 74.502 1.00 63.78 C
ATOM 18 C6 G A 5 1.316 55.473 75.526 1.00 63.59 C
ATOM 19 O6 G A 5 1.884 56.419 76.087 1.00 63.16 O
ATOM 20 N1 G A 5 1.627 54.166 75.889 1.00 63.39 N
ATOM 21 C2 G A 5 1.066 53.039 75.341 1.00 63.03 C
ATOM 22 N2 G A 5 1.499 51.865 75.823 1.00 63.67 N
ATOM 23 N3 G A 5 0.149 53.059 74.391 1.00 62.93 N
ATOM 24 C4 G A 5 -0.170 54.317 74.022 1.00 63.24 C
ATOM 25 P G A 6 -6.144 53.240 73.937 1.00 50.72 P
ATOM 26 OP1 G A 6 -7.608 53.042 73.780 1.00 51.80 O
ATOM 27 OP2 G A 6 -5.640 54.284 74.865 1.00 49.05 O
ATOM 28 O5' G A 6 -5.487 51.849 74.351 1.00 48.86 O
TER
ATOM 1 O3' G B 5 -5.511 53.539 72.491 1.00 53.78 O
ATOM 2 P G B 6 -6.144 53.240 73.937 1.00 50.72 P
ATOM 3 OP1 G B 6 -7.608 53.042 73.780 1.00 51.80 O
ATOM 4 OP2 G B 6 -5.640 54.284 74.865 1.00 49.05 O
ATOM 5 O5' G B 6 -5.487 51.849 74.351 1.00 48.86 O
ATOM 6 C5' G B 6 -5.800 51.228 75.593 1.00 43.49 C
ATOM 7 C4' G B 6 -4.669 50.324 76.019 1.00 39.92 C
ATOM 8 O4' G B 6 -3.429 51.076 75.991 1.00 38.01 O
ATOM 9 C3' G B 6 -4.805 49.739 77.420 1.00 39.81 C
ATOM 10 O3' G B 6 -4.265 48.423 77.412 1.00 43.03 O
ATOM 11 C2' G B 6 -3.919 50.660 78.257 1.00 37.59 C
ATOM 12 O2' G B 6 -3.391 50.037 79.410 1.00 36.38 O
ATOM 13 C1' G B 6 -2.820 51.034 77.262 1.00 36.59 C
ATOM 14 N9 G B 6 -2.230 52.348 77.505 1.00 37.54 N
ATOM 15 C8 G B 6 -2.671 53.545 76.994 1.00 37.64 C
ATOM 16 N7 G B 6 -1.956 54.564 77.384 1.00 36.51 N
ATOM 17 C5 G B 6 -0.983 54.010 78.201 1.00 35.96 C
ATOM 18 C6 G B 6 0.075 54.628 78.910 1.00 36.71 C
ATOM 19 O6 G B 6 0.371 55.828 78.958 1.00 35.97 O
ATOM 20 N1 G B 6 0.829 53.696 79.616 1.00 36.94 N
ATOM 21 C2 G B 6 0.595 52.344 79.638 1.00 35.53 C
ATOM 22 N2 G B 6 1.438 51.611 80.381 1.00 35.04 N
ATOM 23 N3 G B 6 -0.391 51.753 78.981 1.00 36.42 N
ATOM 24 C4 G B 6 -1.136 52.641 78.288 1.00 36.63 C
ATOM 25 P U B 7 -5.239 47.166 77.172 1.00 43.29 P
ATOM 26 OP1 U B 7 -4.542 45.935 77.628 1.00 44.50 O
ATOM 27 OP2 U B 7 -5.730 47.254 75.773 1.00 43.68 O
ATOM 28 O5' U B 7 -6.473 47.434 78.143 1.00 42.31 O
TER
Atoms:
OP1: (-5.761,57.935,69.407)
OP2: (-3.983,59.102,70.846)
C3': (-4.230,54.146,72.397)
C1': (-1.899,53.737,72.280)
C5': (-4.324,55.357,70.118)
O6: (1.884,56.419,76.087)
O4': (-2.324,54.377,71.086)
C8: (-1.093,56.039,73.009)
C2: (1.066,53.039,75.341)
C6: (1.316,55.473,75.526)
C5: (0.330,55.508,74.502)
C4: (-0.170,54.317,74.022)
P: (-4.388,57.971,69.975)
C4': (-3.762,54.232,70.955)
C2': (-3.152,53.266,73.023)
O2': (-3.356,51.889,72.780)
N1: (1.627,54.166,75.889)
N2: (1.499,51.865,75.823)
N3: (0.149,53.059,74.391)
N7: (-0.259,56.586,73.854)
N9: (-1.090,54.666,73.063)
O5': (-4.132,56.611,70.764)
O3': (-5.511,53.539,72.491)
OP2: (-3.983,59.102,70.846)
C3': (-4.230,54.146,72.397)
C1': (-1.899,53.737,72.280)
C5': (-4.324,55.357,70.118)
O6: (1.884,56.419,76.087)
O4': (-2.324,54.377,71.086)
C8: (-1.093,56.039,73.009)
C2: (1.066,53.039,75.341)
C6: (1.316,55.473,75.526)
C5: (0.330,55.508,74.502)
C4: (-0.170,54.317,74.022)
P: (-4.388,57.971,69.975)
C4': (-3.762,54.232,70.955)
C2': (-3.152,53.266,73.023)
O2': (-3.356,51.889,72.780)
N1: (1.627,54.166,75.889)
N2: (1.499,51.865,75.823)
N3: (0.149,53.059,74.391)
N7: (-0.259,56.586,73.854)
N9: (-1.090,54.666,73.063)
O5': (-4.132,56.611,70.764)
O3': (-5.511,53.539,72.491)
OP1: (-7.608,53.042,73.780)
OP2: (-5.640,54.284,74.865)
C3': (-4.805,49.739,77.420)
C1': (-2.820,51.034,77.262)
C5': (-5.800,51.228,75.593)
O6: (0.371,55.828,78.958)
O4': (-3.429,51.076,75.991)
C8: (-2.671,53.545,76.994)
C2: (0.595,52.344,79.638)
C6: (0.075,54.628,78.910)
C5: (-0.983,54.010,78.201)
C4: (-1.136,52.641,78.288)
P: (-6.144,53.240,73.937)
C4': (-4.669,50.324,76.019)
C2': (-3.919,50.660,78.257)
O2': (-3.391,50.037,79.410)
N1: (0.829,53.696,79.616)
N2: (1.438,51.611,80.381)
N3: (-0.391,51.753,78.981)
N7: (-1.956,54.564,77.384)
N9: (-2.230,52.348,77.505)
O5': (-5.487,51.849,74.351)
O3': (-4.265,48.423,77.412)
OP2: (-5.640,54.284,74.865)
C3': (-4.805,49.739,77.420)
C1': (-2.820,51.034,77.262)
C5': (-5.800,51.228,75.593)
O6: (0.371,55.828,78.958)
O4': (-3.429,51.076,75.991)
C8: (-2.671,53.545,76.994)
C2: (0.595,52.344,79.638)
C6: (0.075,54.628,78.910)
C5: (-0.983,54.010,78.201)
C4: (-1.136,52.641,78.288)
P: (-6.144,53.240,73.937)
C4': (-4.669,50.324,76.019)
C2': (-3.919,50.660,78.257)
O2': (-3.391,50.037,79.410)
N1: (0.829,53.696,79.616)
N2: (1.438,51.611,80.381)
N3: (-0.391,51.753,78.981)
N7: (-1.956,54.564,77.384)
N9: (-2.230,52.348,77.505)
O5': (-5.487,51.849,74.351)
O3': (-4.265,48.423,77.412)
Image (generated by PyMOL):