ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BSO:T0:T1

Extra

PDB:
ATOM 1 P U A 0 17.644 -11.755 5.420 1.00 81.69 P
ATOM 2 OP1 U A 0 16.197 -11.441 5.411 1.00 78.20 O
ATOM 3 OP2 U A 0 18.085 -13.133 5.096 1.00 78.99 O
ATOM 4 O5' U A 0 18.422 -10.740 4.451 1.00 58.48 O
ATOM 5 C5' U A 0 18.774 -9.421 4.871 1.00 43.42 C
ATOM 6 C4' U A 0 20.150 -9.003 4.372 1.00 32.29 C
ATOM 7 O4' U A 0 21.152 -9.456 5.320 1.00 34.63 O
ATOM 8 C3' U A 0 20.597 -9.599 3.040 1.00 22.76 C
ATOM 9 O3' U A 0 20.208 -8.762 1.973 1.00 25.85 O
ATOM 10 C2' U A 0 22.116 -9.587 3.179 1.00 29.83 C
ATOM 11 O2' U A 0 22.642 -8.292 2.967 1.00 30.08 O
ATOM 12 C1' U A 0 22.272 -9.997 4.644 1.00 38.12 C
ATOM 13 N1 U A 0 22.323 -11.494 4.853 1.00 41.08 N
ATOM 14 C2 U A 0 23.452 -12.209 4.470 1.00 50.27 C
ATOM 15 O2 U A 0 24.441 -11.705 3.961 1.00 53.03 O
ATOM 16 N3 U A 0 23.386 -13.565 4.701 1.00 50.75 N
ATOM 17 C4 U A 0 22.331 -14.267 5.267 1.00 51.10 C
ATOM 18 O4 U A 0 22.408 -15.482 5.417 1.00 51.34 O
ATOM 19 C5 U A 0 21.197 -13.464 5.639 1.00 48.62 C
ATOM 20 C6 U A 0 21.239 -12.144 5.423 1.00 45.82 C
ATOM 21 P G A 1 19.748 -9.393 0.576 1.00 27.75 P
ATOM 22 OP1 G A 1 18.535 -10.214 0.759 1.00 24.02 O
ATOM 23 OP2 G A 1 20.909 -10.083 -0.016 1.00 24.23 O
ATOM 24 O5' G A 1 19.433 -8.068 -0.252 1.00 24.75 O
TER

ATOM 1 O3' U B 0 20.208 -8.762 1.973 1.00 25.85 O
ATOM 2 P G B 1 19.748 -9.393 0.576 1.00 27.75 P
ATOM 3 OP1 G B 1 18.535 -10.214 0.759 1.00 24.02 O
ATOM 4 OP2 G B 1 20.909 -10.083 -0.016 1.00 24.23 O
ATOM 5 O5' G B 1 19.433 -8.068 -0.252 1.00 24.75 O
ATOM 6 C5' G B 1 18.325 -7.258 0.173 1.00 23.70 C
ATOM 7 C4' G B 1 18.503 -5.816 -0.261 1.00 25.47 C
ATOM 8 O4' G B 1 19.715 -5.238 0.283 1.00 23.55 O
ATOM 9 C3' G B 1 18.702 -5.683 -1.758 1.00 23.09 C
ATOM 10 O3' G B 1 17.436 -5.795 -2.388 1.00 23.94 O
ATOM 11 C2' G B 1 19.305 -4.290 -1.839 1.00 21.18 C
ATOM 12 O2' G B 1 18.386 -3.260 -1.523 1.00 23.98 O
ATOM 13 C1' G B 1 20.291 -4.389 -0.688 1.00 24.60 C
ATOM 14 N9 G B 1 21.626 -4.898 -1.013 1.00 23.73 N
ATOM 15 C8 G B 1 22.119 -6.170 -0.851 1.00 28.58 C
ATOM 16 N7 G B 1 23.368 -6.283 -1.216 1.00 27.64 N
ATOM 17 C5 G B 1 23.711 -5.000 -1.629 1.00 26.07 C
ATOM 18 C6 G B 1 24.935 -4.499 -2.116 1.00 28.17 C
ATOM 19 O6 G B 1 25.984 -5.131 -2.273 1.00 31.07 O
ATOM 20 N1 G B 1 24.873 -3.136 -2.432 1.00 28.42 N
ATOM 21 C2 G B 1 23.759 -2.349 -2.278 1.00 30.42 C
ATOM 22 N2 G B 1 23.893 -1.065 -2.641 1.00 24.37 N
ATOM 23 N3 G B 1 22.592 -2.811 -1.815 1.00 24.42 N
ATOM 24 C4 G B 1 22.652 -4.133 -1.508 1.00 23.79 C
ATOM 25 P C B 2 17.373 -6.298 -3.896 1.00 24.37 P
ATOM 26 OP1 C B 2 15.953 -6.565 -4.247 1.00 24.98 O
ATOM 27 OP2 C B 2 18.422 -7.315 -4.125 1.00 23.36 O
ATOM 28 O5' C B 2 17.831 -4.968 -4.648 1.00 25.74 O
TER

Atoms:
C4: (22.331,-14.267,5.267)
N3: (23.386,-13.565,4.701)
OP1: (16.197,-11.441,5.411)
OP2: (18.085,-13.133,5.096)
C2: (23.452,-12.209,4.470)
C1': (22.272,-9.997,4.644)
C3': (20.597,-9.599,3.040)
O5': (18.422,-10.740,4.451)
O4': (21.152,-9.456,5.320)
C5': (18.774,-9.421,4.871)
P: (17.644,-11.755,5.420)
C4': (20.150,-9.003,4.372)
C2': (22.116,-9.587,3.179)
O2': (22.642,-8.292,2.967)
N1: (22.323,-11.494,4.853)
O4: (22.408,-15.482,5.417)
O2: (24.441,-11.705,3.961)
C6: (21.239,-12.144,5.423)
C5: (21.197,-13.464,5.639)
O3': (20.208,-8.762,1.973)
OP1: (18.535,-10.214,0.759)
OP2: (20.909,-10.083,-0.016)
C3': (18.702,-5.683,-1.758)
C1': (20.291,-4.389,-0.688)
C5': (18.325,-7.258,0.173)
O6: (25.984,-5.131,-2.273)
O4': (19.715,-5.238,0.283)
C8: (22.119,-6.170,-0.851)
C2: (23.759,-2.349,-2.278)
C6: (24.935,-4.499,-2.116)
C5: (23.711,-5.000,-1.629)
C4: (22.652,-4.133,-1.508)
P: (19.748,-9.393,0.576)
C4': (18.503,-5.816,-0.261)
C2': (19.305,-4.290,-1.839)
O2': (18.386,-3.260,-1.523)
N1: (24.873,-3.136,-2.432)
N2: (23.893,-1.065,-2.641)
N3: (22.592,-2.811,-1.815)
N7: (23.368,-6.283,-1.216)
N9: (21.626,-4.898,-1.013)
O5': (19.433,-8.068,-0.252)
O3': (17.436,-5.795,-2.388)
Image (generated by PyMOL):
PyMOL image
show in jmol