Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11842:11843
Extra
PDB:
ATOM 1 O3' G A1841 -0.332 48.020 59.357 1.00 52.00 O
ATOM 2 P G A1842 -1.005 47.125 60.515 1.00 48.81 P
ATOM 3 OP1 G A1842 -2.484 47.311 60.426 1.00 49.22 O
ATOM 4 OP2 G A1842 -0.320 47.444 61.805 1.00 48.73 O
ATOM 5 O5' G A1842 -0.649 45.656 60.057 1.00 48.23 O
ATOM 6 C5' G A1842 -1.137 45.145 58.835 1.00 48.22 C
ATOM 7 C4' G A1842 -0.591 43.771 58.574 1.00 47.64 C
ATOM 8 O4' G A1842 0.856 43.813 58.419 1.00 47.34 O
ATOM 9 C3' G A1842 -0.805 42.769 59.673 1.00 47.28 C
ATOM 10 O3' G A1842 -2.128 42.275 59.682 1.00 47.41 O
ATOM 11 C2' G A1842 0.272 41.718 59.375 1.00 46.71 C
ATOM 12 O2' G A1842 -0.144 40.819 58.390 1.00 46.56 O
ATOM 13 C1' G A1842 1.408 42.568 58.791 1.00 46.78 C
ATOM 14 N9 G A1842 2.481 42.760 59.787 1.00 46.57 N
ATOM 15 C8 G A1842 2.598 43.745 60.710 1.00 46.84 C
ATOM 16 N7 G A1842 3.599 43.543 61.510 1.00 46.54 N
ATOM 17 C5 G A1842 4.138 42.319 61.128 1.00 46.03 C
ATOM 18 C6 G A1842 5.253 41.588 61.648 1.00 45.56 C
ATOM 19 O6 G A1842 5.994 41.923 62.599 1.00 45.50 O
ATOM 20 N1 G A1842 5.493 40.396 60.965 1.00 45.15 N
ATOM 21 C2 G A1842 4.737 39.986 59.902 1.00 45.21 C
ATOM 22 N2 G A1842 5.092 38.826 59.363 1.00 44.80 N
ATOM 23 N3 G A1842 3.716 40.666 59.396 1.00 45.65 N
ATOM 24 C4 G A1842 3.460 41.822 60.058 1.00 46.05 C
ATOM 25 P G A1843 -2.833 41.821 61.058 1.00 49.73 P
ATOM 26 OP1 G A1843 -4.187 41.257 60.709 1.00 49.88 O
ATOM 27 OP2 G A1843 -2.760 42.961 62.008 1.00 50.06 O
ATOM 28 O5' G A1843 -1.883 40.672 61.555 1.00 49.12 O
TER
ATOM 1 O3' G B1842 -2.128 42.275 59.682 1.00 47.41 O
ATOM 2 P G B1843 -2.833 41.821 61.058 1.00 49.73 P
ATOM 3 OP1 G B1843 -4.187 41.257 60.709 1.00 49.88 O
ATOM 4 OP2 G B1843 -2.760 42.961 62.008 1.00 50.06 O
ATOM 5 O5' G B1843 -1.883 40.672 61.555 1.00 49.12 O
ATOM 6 C5' G B1843 -1.751 39.464 60.852 1.00 48.73 C
ATOM 7 C4' G B1843 -0.821 38.571 61.588 1.00 48.22 C
ATOM 8 O4' G B1843 0.391 39.323 61.879 1.00 48.18 O
ATOM 9 C3' G B1843 -1.346 38.126 62.926 1.00 48.14 C
ATOM 10 O3' G B1843 -0.743 36.911 63.267 1.00 47.63 O
ATOM 11 C2' G B1843 -0.827 39.205 63.837 1.00 48.34 C
ATOM 12 O2' G B1843 -0.786 38.862 65.191 1.00 48.19 O
ATOM 13 C1' G B1843 0.552 39.435 63.270 1.00 48.13 C
ATOM 14 N9 G B1843 1.096 40.758 63.598 1.00 48.43 N
ATOM 15 C8 G B1843 0.484 41.961 63.426 1.00 48.96 C
ATOM 16 N7 G B1843 1.136 42.997 63.848 1.00 49.16 N
ATOM 17 C5 G B1843 2.246 42.423 64.386 1.00 48.73 C
ATOM 18 C6 G B1843 3.317 43.035 65.028 1.00 48.71 C
ATOM 19 O6 G B1843 3.498 44.231 65.230 1.00 49.08 O
ATOM 20 N1 G B1843 4.288 42.125 65.426 1.00 48.21 N
ATOM 21 C2 G B1843 4.247 40.796 65.242 1.00 47.78 C
ATOM 22 N2 G B1843 5.302 40.145 65.722 1.00 47.37 N
ATOM 23 N3 G B1843 3.231 40.198 64.656 1.00 47.80 N
ATOM 24 C4 G B1843 2.263 41.065 64.247 1.00 48.28 C
ATOM 25 P A B1844 -1.638 35.625 63.555 1.00 42.74 P
ATOM 26 OP1 A B1844 -2.542 35.452 62.378 1.00 42.93 O
ATOM 27 OP2 A B1844 -2.215 35.800 64.901 1.00 42.89 O
ATOM 28 O5' A B1844 -0.558 34.472 63.560 1.00 42.17 O
TER
ATOM 2 P G A1842 -1.005 47.125 60.515 1.00 48.81 P
ATOM 3 OP1 G A1842 -2.484 47.311 60.426 1.00 49.22 O
ATOM 4 OP2 G A1842 -0.320 47.444 61.805 1.00 48.73 O
ATOM 5 O5' G A1842 -0.649 45.656 60.057 1.00 48.23 O
ATOM 6 C5' G A1842 -1.137 45.145 58.835 1.00 48.22 C
ATOM 7 C4' G A1842 -0.591 43.771 58.574 1.00 47.64 C
ATOM 8 O4' G A1842 0.856 43.813 58.419 1.00 47.34 O
ATOM 9 C3' G A1842 -0.805 42.769 59.673 1.00 47.28 C
ATOM 10 O3' G A1842 -2.128 42.275 59.682 1.00 47.41 O
ATOM 11 C2' G A1842 0.272 41.718 59.375 1.00 46.71 C
ATOM 12 O2' G A1842 -0.144 40.819 58.390 1.00 46.56 O
ATOM 13 C1' G A1842 1.408 42.568 58.791 1.00 46.78 C
ATOM 14 N9 G A1842 2.481 42.760 59.787 1.00 46.57 N
ATOM 15 C8 G A1842 2.598 43.745 60.710 1.00 46.84 C
ATOM 16 N7 G A1842 3.599 43.543 61.510 1.00 46.54 N
ATOM 17 C5 G A1842 4.138 42.319 61.128 1.00 46.03 C
ATOM 18 C6 G A1842 5.253 41.588 61.648 1.00 45.56 C
ATOM 19 O6 G A1842 5.994 41.923 62.599 1.00 45.50 O
ATOM 20 N1 G A1842 5.493 40.396 60.965 1.00 45.15 N
ATOM 21 C2 G A1842 4.737 39.986 59.902 1.00 45.21 C
ATOM 22 N2 G A1842 5.092 38.826 59.363 1.00 44.80 N
ATOM 23 N3 G A1842 3.716 40.666 59.396 1.00 45.65 N
ATOM 24 C4 G A1842 3.460 41.822 60.058 1.00 46.05 C
ATOM 25 P G A1843 -2.833 41.821 61.058 1.00 49.73 P
ATOM 26 OP1 G A1843 -4.187 41.257 60.709 1.00 49.88 O
ATOM 27 OP2 G A1843 -2.760 42.961 62.008 1.00 50.06 O
ATOM 28 O5' G A1843 -1.883 40.672 61.555 1.00 49.12 O
TER
ATOM 1 O3' G B1842 -2.128 42.275 59.682 1.00 47.41 O
ATOM 2 P G B1843 -2.833 41.821 61.058 1.00 49.73 P
ATOM 3 OP1 G B1843 -4.187 41.257 60.709 1.00 49.88 O
ATOM 4 OP2 G B1843 -2.760 42.961 62.008 1.00 50.06 O
ATOM 5 O5' G B1843 -1.883 40.672 61.555 1.00 49.12 O
ATOM 6 C5' G B1843 -1.751 39.464 60.852 1.00 48.73 C
ATOM 7 C4' G B1843 -0.821 38.571 61.588 1.00 48.22 C
ATOM 8 O4' G B1843 0.391 39.323 61.879 1.00 48.18 O
ATOM 9 C3' G B1843 -1.346 38.126 62.926 1.00 48.14 C
ATOM 10 O3' G B1843 -0.743 36.911 63.267 1.00 47.63 O
ATOM 11 C2' G B1843 -0.827 39.205 63.837 1.00 48.34 C
ATOM 12 O2' G B1843 -0.786 38.862 65.191 1.00 48.19 O
ATOM 13 C1' G B1843 0.552 39.435 63.270 1.00 48.13 C
ATOM 14 N9 G B1843 1.096 40.758 63.598 1.00 48.43 N
ATOM 15 C8 G B1843 0.484 41.961 63.426 1.00 48.96 C
ATOM 16 N7 G B1843 1.136 42.997 63.848 1.00 49.16 N
ATOM 17 C5 G B1843 2.246 42.423 64.386 1.00 48.73 C
ATOM 18 C6 G B1843 3.317 43.035 65.028 1.00 48.71 C
ATOM 19 O6 G B1843 3.498 44.231 65.230 1.00 49.08 O
ATOM 20 N1 G B1843 4.288 42.125 65.426 1.00 48.21 N
ATOM 21 C2 G B1843 4.247 40.796 65.242 1.00 47.78 C
ATOM 22 N2 G B1843 5.302 40.145 65.722 1.00 47.37 N
ATOM 23 N3 G B1843 3.231 40.198 64.656 1.00 47.80 N
ATOM 24 C4 G B1843 2.263 41.065 64.247 1.00 48.28 C
ATOM 25 P A B1844 -1.638 35.625 63.555 1.00 42.74 P
ATOM 26 OP1 A B1844 -2.542 35.452 62.378 1.00 42.93 O
ATOM 27 OP2 A B1844 -2.215 35.800 64.901 1.00 42.89 O
ATOM 28 O5' A B1844 -0.558 34.472 63.560 1.00 42.17 O
TER
Atoms:
OP1: (-2.484,47.311,60.426)
OP2: (-0.320,47.444,61.805)
C3': (-0.805,42.769,59.673)
C1': (1.408,42.568,58.791)
C5': (-1.137,45.145,58.835)
O6: (5.994,41.923,62.599)
O4': (0.856,43.813,58.419)
C8: (2.598,43.745,60.710)
C2: (4.737,39.986,59.902)
C6: (5.253,41.588,61.648)
C5: (4.138,42.319,61.128)
C4: (3.460,41.822,60.058)
P: (-1.005,47.125,60.515)
C4': (-0.591,43.771,58.574)
C2': (0.272,41.718,59.375)
O2': (-0.144,40.819,58.390)
N1: (5.493,40.396,60.965)
N2: (5.092,38.826,59.363)
N3: (3.716,40.666,59.396)
N7: (3.599,43.543,61.510)
N9: (2.481,42.760,59.787)
O5': (-0.649,45.656,60.057)
O3': (-2.128,42.275,59.682)
OP2: (-0.320,47.444,61.805)
C3': (-0.805,42.769,59.673)
C1': (1.408,42.568,58.791)
C5': (-1.137,45.145,58.835)
O6: (5.994,41.923,62.599)
O4': (0.856,43.813,58.419)
C8: (2.598,43.745,60.710)
C2: (4.737,39.986,59.902)
C6: (5.253,41.588,61.648)
C5: (4.138,42.319,61.128)
C4: (3.460,41.822,60.058)
P: (-1.005,47.125,60.515)
C4': (-0.591,43.771,58.574)
C2': (0.272,41.718,59.375)
O2': (-0.144,40.819,58.390)
N1: (5.493,40.396,60.965)
N2: (5.092,38.826,59.363)
N3: (3.716,40.666,59.396)
N7: (3.599,43.543,61.510)
N9: (2.481,42.760,59.787)
O5': (-0.649,45.656,60.057)
O3': (-2.128,42.275,59.682)
OP1: (-4.187,41.257,60.709)
OP2: (-2.760,42.961,62.008)
C3': (-1.346,38.126,62.926)
C1': (0.552,39.435,63.270)
C5': (-1.751,39.464,60.852)
O6: (3.498,44.231,65.230)
O4': (0.391,39.323,61.879)
C8: (0.484,41.961,63.426)
C2: (4.247,40.796,65.242)
C6: (3.317,43.035,65.028)
C5: (2.246,42.423,64.386)
C4: (2.263,41.065,64.247)
P: (-2.833,41.821,61.058)
C4': (-0.821,38.571,61.588)
C2': (-0.827,39.205,63.837)
O2': (-0.786,38.862,65.191)
N1: (4.288,42.125,65.426)
N2: (5.302,40.145,65.722)
N3: (3.231,40.198,64.656)
N7: (1.136,42.997,63.848)
N9: (1.096,40.758,63.598)
O5': (-1.883,40.672,61.555)
O3': (-0.743,36.911,63.267)
OP2: (-2.760,42.961,62.008)
C3': (-1.346,38.126,62.926)
C1': (0.552,39.435,63.270)
C5': (-1.751,39.464,60.852)
O6: (3.498,44.231,65.230)
O4': (0.391,39.323,61.879)
C8: (0.484,41.961,63.426)
C2: (4.247,40.796,65.242)
C6: (3.317,43.035,65.028)
C5: (2.246,42.423,64.386)
C4: (2.263,41.065,64.247)
P: (-2.833,41.821,61.058)
C4': (-0.821,38.571,61.588)
C2': (-0.827,39.205,63.837)
O2': (-0.786,38.862,65.191)
N1: (4.288,42.125,65.426)
N2: (5.302,40.145,65.722)
N3: (3.231,40.198,64.656)
N7: (1.136,42.997,63.848)
N9: (1.096,40.758,63.598)
O5': (-1.883,40.672,61.555)
O3': (-0.743,36.911,63.267)
Image (generated by PyMOL):