Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3H5X:T0:T1
Extra
PDB:
ATOM 1 P U A 0 17.608 -10.450 6.904 1.00 67.07 P
ATOM 2 OP1 U A 0 16.144 -10.247 6.769 1.00 58.75 O
ATOM 3 OP2 U A 0 18.137 -11.712 7.481 1.00 61.71 O
ATOM 4 O5' U A 0 18.318 -10.209 5.483 1.00 51.68 O
ATOM 5 C5' U A 0 18.662 -8.890 5.097 1.00 43.65 C
ATOM 6 C4' U A 0 20.087 -8.829 4.587 1.00 38.16 C
ATOM 7 O4' U A 0 20.980 -9.480 5.532 1.00 35.01 O
ATOM 8 C3' U A 0 20.350 -9.544 3.271 1.00 30.05 C
ATOM 9 O3' U A 0 19.998 -8.698 2.185 1.00 28.44 O
ATOM 10 C2' U A 0 21.863 -9.609 3.353 1.00 34.59 C
ATOM 11 O2' U A 0 22.396 -8.321 3.106 1.00 32.33 O
ATOM 12 C1' U A 0 22.075 -10.012 4.817 1.00 36.55 C
ATOM 13 N1 U A 0 22.061 -11.485 5.017 1.00 40.38 N
ATOM 14 C2 U A 0 23.196 -12.218 4.726 1.00 45.52 C
ATOM 15 O2 U A 0 24.226 -11.715 4.312 1.00 44.50 O
ATOM 16 N3 U A 0 23.074 -13.568 4.941 1.00 46.10 N
ATOM 17 C4 U A 0 21.953 -14.238 5.405 1.00 48.73 C
ATOM 18 O4 U A 0 21.988 -15.454 5.547 1.00 52.27 O
ATOM 19 C5 U A 0 20.811 -13.407 5.679 1.00 49.36 C
ATOM 20 C6 U A 0 20.909 -12.086 5.481 1.00 45.90 C
ATOM 21 P G A 1 19.596 -9.309 0.761 1.00 27.76 P
ATOM 22 OP1 G A 1 18.362 -10.120 0.935 1.00 25.46 O
ATOM 23 OP2 G A 1 20.820 -9.920 0.175 1.00 27.75 O
ATOM 24 O5' G A 1 19.282 -7.949 -0.025 1.00 20.89 O
TER
ATOM 1 O3' U B 0 19.998 -8.698 2.185 1.00 28.44 O
ATOM 2 P G B 1 19.596 -9.309 0.761 1.00 27.76 P
ATOM 3 OP1 G B 1 18.362 -10.120 0.935 1.00 25.46 O
ATOM 4 OP2 G B 1 20.820 -9.920 0.175 1.00 27.75 O
ATOM 5 O5' G B 1 19.282 -7.949 -0.025 1.00 20.89 O
ATOM 6 C5' G B 1 18.188 -7.119 0.453 1.00 23.14 C
ATOM 7 C4' G B 1 18.329 -5.681 -0.010 1.00 22.81 C
ATOM 8 O4' G B 1 19.540 -5.089 0.535 1.00 21.49 O
ATOM 9 C3' G B 1 18.544 -5.539 -1.507 1.00 21.74 C
ATOM 10 O3' G B 1 17.273 -5.652 -2.156 1.00 21.63 O
ATOM 11 C2' G B 1 19.103 -4.131 -1.573 1.00 23.09 C
ATOM 12 O2' G B 1 18.166 -3.134 -1.164 1.00 20.34 O
ATOM 13 C1' G B 1 20.117 -4.240 -0.445 1.00 22.09 C
ATOM 14 N9 G B 1 21.442 -4.773 -0.782 1.00 18.42 N
ATOM 15 C8 G B 1 21.914 -6.060 -0.643 1.00 24.27 C
ATOM 16 N7 G B 1 23.166 -6.197 -1.015 1.00 22.19 N
ATOM 17 C5 G B 1 23.527 -4.901 -1.395 1.00 21.37 C
ATOM 18 C6 G B 1 24.757 -4.421 -1.866 1.00 27.62 C
ATOM 19 O6 G B 1 25.809 -5.054 -2.035 1.00 27.15 O
ATOM 20 N1 G B 1 24.699 -3.061 -2.141 1.00 27.76 N
ATOM 21 C2 G B 1 23.600 -2.255 -1.975 1.00 29.34 C
ATOM 22 N2 G B 1 23.814 -0.974 -2.309 1.00 25.30 N
ATOM 23 N3 G B 1 22.420 -2.682 -1.507 1.00 23.30 N
ATOM 24 C4 G B 1 22.481 -4.012 -1.252 1.00 20.95 C
ATOM 25 P C B 2 17.241 -6.087 -3.675 1.00 22.66 P
ATOM 26 OP1 C B 2 15.812 -6.368 -4.037 1.00 22.81 O
ATOM 27 OP2 C B 2 18.234 -7.159 -3.878 1.00 20.36 O
ATOM 28 O5' C B 2 17.743 -4.802 -4.459 1.00 25.29 O
TER
ATOM 2 OP1 U A 0 16.144 -10.247 6.769 1.00 58.75 O
ATOM 3 OP2 U A 0 18.137 -11.712 7.481 1.00 61.71 O
ATOM 4 O5' U A 0 18.318 -10.209 5.483 1.00 51.68 O
ATOM 5 C5' U A 0 18.662 -8.890 5.097 1.00 43.65 C
ATOM 6 C4' U A 0 20.087 -8.829 4.587 1.00 38.16 C
ATOM 7 O4' U A 0 20.980 -9.480 5.532 1.00 35.01 O
ATOM 8 C3' U A 0 20.350 -9.544 3.271 1.00 30.05 C
ATOM 9 O3' U A 0 19.998 -8.698 2.185 1.00 28.44 O
ATOM 10 C2' U A 0 21.863 -9.609 3.353 1.00 34.59 C
ATOM 11 O2' U A 0 22.396 -8.321 3.106 1.00 32.33 O
ATOM 12 C1' U A 0 22.075 -10.012 4.817 1.00 36.55 C
ATOM 13 N1 U A 0 22.061 -11.485 5.017 1.00 40.38 N
ATOM 14 C2 U A 0 23.196 -12.218 4.726 1.00 45.52 C
ATOM 15 O2 U A 0 24.226 -11.715 4.312 1.00 44.50 O
ATOM 16 N3 U A 0 23.074 -13.568 4.941 1.00 46.10 N
ATOM 17 C4 U A 0 21.953 -14.238 5.405 1.00 48.73 C
ATOM 18 O4 U A 0 21.988 -15.454 5.547 1.00 52.27 O
ATOM 19 C5 U A 0 20.811 -13.407 5.679 1.00 49.36 C
ATOM 20 C6 U A 0 20.909 -12.086 5.481 1.00 45.90 C
ATOM 21 P G A 1 19.596 -9.309 0.761 1.00 27.76 P
ATOM 22 OP1 G A 1 18.362 -10.120 0.935 1.00 25.46 O
ATOM 23 OP2 G A 1 20.820 -9.920 0.175 1.00 27.75 O
ATOM 24 O5' G A 1 19.282 -7.949 -0.025 1.00 20.89 O
TER
ATOM 1 O3' U B 0 19.998 -8.698 2.185 1.00 28.44 O
ATOM 2 P G B 1 19.596 -9.309 0.761 1.00 27.76 P
ATOM 3 OP1 G B 1 18.362 -10.120 0.935 1.00 25.46 O
ATOM 4 OP2 G B 1 20.820 -9.920 0.175 1.00 27.75 O
ATOM 5 O5' G B 1 19.282 -7.949 -0.025 1.00 20.89 O
ATOM 6 C5' G B 1 18.188 -7.119 0.453 1.00 23.14 C
ATOM 7 C4' G B 1 18.329 -5.681 -0.010 1.00 22.81 C
ATOM 8 O4' G B 1 19.540 -5.089 0.535 1.00 21.49 O
ATOM 9 C3' G B 1 18.544 -5.539 -1.507 1.00 21.74 C
ATOM 10 O3' G B 1 17.273 -5.652 -2.156 1.00 21.63 O
ATOM 11 C2' G B 1 19.103 -4.131 -1.573 1.00 23.09 C
ATOM 12 O2' G B 1 18.166 -3.134 -1.164 1.00 20.34 O
ATOM 13 C1' G B 1 20.117 -4.240 -0.445 1.00 22.09 C
ATOM 14 N9 G B 1 21.442 -4.773 -0.782 1.00 18.42 N
ATOM 15 C8 G B 1 21.914 -6.060 -0.643 1.00 24.27 C
ATOM 16 N7 G B 1 23.166 -6.197 -1.015 1.00 22.19 N
ATOM 17 C5 G B 1 23.527 -4.901 -1.395 1.00 21.37 C
ATOM 18 C6 G B 1 24.757 -4.421 -1.866 1.00 27.62 C
ATOM 19 O6 G B 1 25.809 -5.054 -2.035 1.00 27.15 O
ATOM 20 N1 G B 1 24.699 -3.061 -2.141 1.00 27.76 N
ATOM 21 C2 G B 1 23.600 -2.255 -1.975 1.00 29.34 C
ATOM 22 N2 G B 1 23.814 -0.974 -2.309 1.00 25.30 N
ATOM 23 N3 G B 1 22.420 -2.682 -1.507 1.00 23.30 N
ATOM 24 C4 G B 1 22.481 -4.012 -1.252 1.00 20.95 C
ATOM 25 P C B 2 17.241 -6.087 -3.675 1.00 22.66 P
ATOM 26 OP1 C B 2 15.812 -6.368 -4.037 1.00 22.81 O
ATOM 27 OP2 C B 2 18.234 -7.159 -3.878 1.00 20.36 O
ATOM 28 O5' C B 2 17.743 -4.802 -4.459 1.00 25.29 O
TER
Atoms:
C4: (21.953,-14.238,5.405)
N3: (23.074,-13.568,4.941)
OP1: (16.144,-10.247,6.769)
OP2: (18.137,-11.712,7.481)
C2: (23.196,-12.218,4.726)
C1': (22.075,-10.012,4.817)
C3': (20.350,-9.544,3.271)
O5': (18.318,-10.209,5.483)
O4': (20.980,-9.480,5.532)
C5': (18.662,-8.890,5.097)
P: (17.608,-10.450,6.904)
C4': (20.087,-8.829,4.587)
C2': (21.863,-9.609,3.353)
O2': (22.396,-8.321,3.106)
N1: (22.061,-11.485,5.017)
O4: (21.988,-15.454,5.547)
O2: (24.226,-11.715,4.312)
C6: (20.909,-12.086,5.481)
C5: (20.811,-13.407,5.679)
O3': (19.998,-8.698,2.185)
N3: (23.074,-13.568,4.941)
OP1: (16.144,-10.247,6.769)
OP2: (18.137,-11.712,7.481)
C2: (23.196,-12.218,4.726)
C1': (22.075,-10.012,4.817)
C3': (20.350,-9.544,3.271)
O5': (18.318,-10.209,5.483)
O4': (20.980,-9.480,5.532)
C5': (18.662,-8.890,5.097)
P: (17.608,-10.450,6.904)
C4': (20.087,-8.829,4.587)
C2': (21.863,-9.609,3.353)
O2': (22.396,-8.321,3.106)
N1: (22.061,-11.485,5.017)
O4: (21.988,-15.454,5.547)
O2: (24.226,-11.715,4.312)
C6: (20.909,-12.086,5.481)
C5: (20.811,-13.407,5.679)
O3': (19.998,-8.698,2.185)
OP1: (18.362,-10.120,0.935)
OP2: (20.820,-9.920,0.175)
C3': (18.544,-5.539,-1.507)
C1': (20.117,-4.240,-0.445)
C5': (18.188,-7.119,0.453)
O6: (25.809,-5.054,-2.035)
O4': (19.540,-5.089,0.535)
C8: (21.914,-6.060,-0.643)
C2: (23.600,-2.255,-1.975)
C6: (24.757,-4.421,-1.866)
C5: (23.527,-4.901,-1.395)
C4: (22.481,-4.012,-1.252)
P: (19.596,-9.309,0.761)
C4': (18.329,-5.681,-0.010)
C2': (19.103,-4.131,-1.573)
O2': (18.166,-3.134,-1.164)
N1: (24.699,-3.061,-2.141)
N2: (23.814,-0.974,-2.309)
N3: (22.420,-2.682,-1.507)
N7: (23.166,-6.197,-1.015)
N9: (21.442,-4.773,-0.782)
O5': (19.282,-7.949,-0.025)
O3': (17.273,-5.652,-2.156)
OP2: (20.820,-9.920,0.175)
C3': (18.544,-5.539,-1.507)
C1': (20.117,-4.240,-0.445)
C5': (18.188,-7.119,0.453)
O6: (25.809,-5.054,-2.035)
O4': (19.540,-5.089,0.535)
C8: (21.914,-6.060,-0.643)
C2: (23.600,-2.255,-1.975)
C6: (24.757,-4.421,-1.866)
C5: (23.527,-4.901,-1.395)
C4: (22.481,-4.012,-1.252)
P: (19.596,-9.309,0.761)
C4': (18.329,-5.681,-0.010)
C2': (19.103,-4.131,-1.573)
O2': (18.166,-3.134,-1.164)
N1: (24.699,-3.061,-2.141)
N2: (23.814,-0.974,-2.309)
N3: (22.420,-2.682,-1.507)
N7: (23.166,-6.197,-1.015)
N9: (21.442,-4.773,-0.782)
O5': (19.282,-7.949,-0.025)
O3': (17.273,-5.652,-2.156)
Image (generated by PyMOL):