Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3H5Y:T0:T1
Extra
PDB:
ATOM 1 P U A 0 16.791 -10.365 6.550 1.00 72.35 P
ATOM 2 OP1 U A 0 16.477 -9.060 7.180 1.00 71.40 O
ATOM 3 OP2 U A 0 15.687 -11.250 6.099 1.00 70.73 O
ATOM 4 O5' U A 0 17.821 -10.146 5.328 1.00 63.45 O
ATOM 5 C5' U A 0 18.220 -8.830 4.945 1.00 54.09 C
ATOM 6 C4' U A 0 19.678 -8.764 4.514 1.00 46.67 C
ATOM 7 O4' U A 0 20.565 -9.322 5.514 1.00 46.90 O
ATOM 8 C3' U A 0 20.042 -9.509 3.243 1.00 41.01 C
ATOM 9 O3' U A 0 19.711 -8.687 2.155 1.00 33.93 O
ATOM 10 C2' U A 0 21.553 -9.539 3.388 1.00 43.83 C
ATOM 11 O2' U A 0 22.087 -8.258 3.120 1.00 38.45 O
ATOM 12 C1' U A 0 21.689 -9.890 4.869 1.00 48.19 C
ATOM 13 N1 U A 0 21.606 -11.349 5.100 1.00 53.14 N
ATOM 14 C2 U A 0 22.736 -12.127 4.983 1.00 56.59 C
ATOM 15 O2 U A 0 23.832 -11.674 4.701 1.00 59.90 O
ATOM 16 N3 U A 0 22.530 -13.466 5.214 1.00 58.78 N
ATOM 17 C4 U A 0 21.333 -14.082 5.538 1.00 58.69 C
ATOM 18 O4 U A 0 21.303 -15.293 5.716 1.00 61.76 O
ATOM 19 C5 U A 0 20.198 -13.202 5.634 1.00 58.72 C
ATOM 20 C6 U A 0 20.376 -11.895 5.415 1.00 55.60 C
ATOM 21 P G A 1 19.328 -9.303 0.732 1.00 33.26 P
ATOM 22 OP1 G A 1 18.107 -10.135 0.934 1.00 27.86 O
ATOM 23 OP2 G A 1 20.562 -9.925 0.167 1.00 29.35 O
ATOM 24 O5' G A 1 19.014 -7.956 -0.072 1.00 23.06 O
TER
ATOM 1 O3' U B 0 19.711 -8.687 2.155 1.00 33.93 O
ATOM 2 P G B 1 19.328 -9.303 0.732 1.00 33.26 P
ATOM 3 OP1 G B 1 18.107 -10.135 0.934 1.00 27.86 O
ATOM 4 OP2 G B 1 20.562 -9.925 0.167 1.00 29.35 O
ATOM 5 O5' G B 1 19.014 -7.956 -0.072 1.00 23.06 O
ATOM 6 C5' G B 1 17.918 -7.156 0.389 1.00 26.58 C
ATOM 7 C4' G B 1 18.036 -5.708 -0.054 1.00 26.07 C
ATOM 8 O4' G B 1 19.219 -5.105 0.503 1.00 22.47 O
ATOM 9 C3' G B 1 18.234 -5.541 -1.543 1.00 20.96 C
ATOM 10 O3' G B 1 16.985 -5.694 -2.162 1.00 21.12 O
ATOM 11 C2' G B 1 18.748 -4.118 -1.595 1.00 21.17 C
ATOM 12 O2' G B 1 17.776 -3.163 -1.193 1.00 19.26 O
ATOM 13 C1' G B 1 19.754 -4.215 -0.460 1.00 23.07 C
ATOM 14 N9 G B 1 21.089 -4.725 -0.788 1.00 21.39 N
ATOM 15 C8 G B 1 21.588 -5.988 -0.601 1.00 26.37 C
ATOM 16 N7 G B 1 22.845 -6.105 -0.961 1.00 24.45 N
ATOM 17 C5 G B 1 23.188 -4.818 -1.401 1.00 25.12 C
ATOM 18 C6 G B 1 24.400 -4.297 -1.903 1.00 28.67 C
ATOM 19 O6 G B 1 25.492 -4.859 -2.078 1.00 30.25 O
ATOM 20 N1 G B 1 24.284 -2.944 -2.229 1.00 28.42 N
ATOM 21 C2 G B 1 23.150 -2.181 -2.076 1.00 29.35 C
ATOM 22 N2 G B 1 23.281 -0.896 -2.455 1.00 26.91 N
ATOM 23 N3 G B 1 21.996 -2.643 -1.593 1.00 25.23 N
ATOM 24 C4 G B 1 22.109 -3.961 -1.291 1.00 24.97 C
ATOM 25 P C B 2 16.946 -6.132 -3.680 1.00 23.40 P
ATOM 26 OP1 C B 2 15.546 -6.442 -4.074 1.00 22.21 O
ATOM 27 OP2 C B 2 18.013 -7.156 -3.853 1.00 21.28 O
ATOM 28 O5' C B 2 17.455 -4.805 -4.409 1.00 24.81 O
TER
ATOM 2 OP1 U A 0 16.477 -9.060 7.180 1.00 71.40 O
ATOM 3 OP2 U A 0 15.687 -11.250 6.099 1.00 70.73 O
ATOM 4 O5' U A 0 17.821 -10.146 5.328 1.00 63.45 O
ATOM 5 C5' U A 0 18.220 -8.830 4.945 1.00 54.09 C
ATOM 6 C4' U A 0 19.678 -8.764 4.514 1.00 46.67 C
ATOM 7 O4' U A 0 20.565 -9.322 5.514 1.00 46.90 O
ATOM 8 C3' U A 0 20.042 -9.509 3.243 1.00 41.01 C
ATOM 9 O3' U A 0 19.711 -8.687 2.155 1.00 33.93 O
ATOM 10 C2' U A 0 21.553 -9.539 3.388 1.00 43.83 C
ATOM 11 O2' U A 0 22.087 -8.258 3.120 1.00 38.45 O
ATOM 12 C1' U A 0 21.689 -9.890 4.869 1.00 48.19 C
ATOM 13 N1 U A 0 21.606 -11.349 5.100 1.00 53.14 N
ATOM 14 C2 U A 0 22.736 -12.127 4.983 1.00 56.59 C
ATOM 15 O2 U A 0 23.832 -11.674 4.701 1.00 59.90 O
ATOM 16 N3 U A 0 22.530 -13.466 5.214 1.00 58.78 N
ATOM 17 C4 U A 0 21.333 -14.082 5.538 1.00 58.69 C
ATOM 18 O4 U A 0 21.303 -15.293 5.716 1.00 61.76 O
ATOM 19 C5 U A 0 20.198 -13.202 5.634 1.00 58.72 C
ATOM 20 C6 U A 0 20.376 -11.895 5.415 1.00 55.60 C
ATOM 21 P G A 1 19.328 -9.303 0.732 1.00 33.26 P
ATOM 22 OP1 G A 1 18.107 -10.135 0.934 1.00 27.86 O
ATOM 23 OP2 G A 1 20.562 -9.925 0.167 1.00 29.35 O
ATOM 24 O5' G A 1 19.014 -7.956 -0.072 1.00 23.06 O
TER
ATOM 1 O3' U B 0 19.711 -8.687 2.155 1.00 33.93 O
ATOM 2 P G B 1 19.328 -9.303 0.732 1.00 33.26 P
ATOM 3 OP1 G B 1 18.107 -10.135 0.934 1.00 27.86 O
ATOM 4 OP2 G B 1 20.562 -9.925 0.167 1.00 29.35 O
ATOM 5 O5' G B 1 19.014 -7.956 -0.072 1.00 23.06 O
ATOM 6 C5' G B 1 17.918 -7.156 0.389 1.00 26.58 C
ATOM 7 C4' G B 1 18.036 -5.708 -0.054 1.00 26.07 C
ATOM 8 O4' G B 1 19.219 -5.105 0.503 1.00 22.47 O
ATOM 9 C3' G B 1 18.234 -5.541 -1.543 1.00 20.96 C
ATOM 10 O3' G B 1 16.985 -5.694 -2.162 1.00 21.12 O
ATOM 11 C2' G B 1 18.748 -4.118 -1.595 1.00 21.17 C
ATOM 12 O2' G B 1 17.776 -3.163 -1.193 1.00 19.26 O
ATOM 13 C1' G B 1 19.754 -4.215 -0.460 1.00 23.07 C
ATOM 14 N9 G B 1 21.089 -4.725 -0.788 1.00 21.39 N
ATOM 15 C8 G B 1 21.588 -5.988 -0.601 1.00 26.37 C
ATOM 16 N7 G B 1 22.845 -6.105 -0.961 1.00 24.45 N
ATOM 17 C5 G B 1 23.188 -4.818 -1.401 1.00 25.12 C
ATOM 18 C6 G B 1 24.400 -4.297 -1.903 1.00 28.67 C
ATOM 19 O6 G B 1 25.492 -4.859 -2.078 1.00 30.25 O
ATOM 20 N1 G B 1 24.284 -2.944 -2.229 1.00 28.42 N
ATOM 21 C2 G B 1 23.150 -2.181 -2.076 1.00 29.35 C
ATOM 22 N2 G B 1 23.281 -0.896 -2.455 1.00 26.91 N
ATOM 23 N3 G B 1 21.996 -2.643 -1.593 1.00 25.23 N
ATOM 24 C4 G B 1 22.109 -3.961 -1.291 1.00 24.97 C
ATOM 25 P C B 2 16.946 -6.132 -3.680 1.00 23.40 P
ATOM 26 OP1 C B 2 15.546 -6.442 -4.074 1.00 22.21 O
ATOM 27 OP2 C B 2 18.013 -7.156 -3.853 1.00 21.28 O
ATOM 28 O5' C B 2 17.455 -4.805 -4.409 1.00 24.81 O
TER
Atoms:
C4: (21.333,-14.082,5.538)
N3: (22.530,-13.466,5.214)
OP1: (16.477,-9.060,7.180)
OP2: (15.687,-11.250,6.099)
C2: (22.736,-12.127,4.983)
C1': (21.689,-9.890,4.869)
C3': (20.042,-9.509,3.243)
O5': (17.821,-10.146,5.328)
O4': (20.565,-9.322,5.514)
C5': (18.220,-8.830,4.945)
P: (16.791,-10.365,6.550)
C4': (19.678,-8.764,4.514)
C2': (21.553,-9.539,3.388)
O2': (22.087,-8.258,3.120)
N1: (21.606,-11.349,5.100)
O4: (21.303,-15.293,5.716)
O2: (23.832,-11.674,4.701)
C6: (20.376,-11.895,5.415)
C5: (20.198,-13.202,5.634)
O3': (19.711,-8.687,2.155)
N3: (22.530,-13.466,5.214)
OP1: (16.477,-9.060,7.180)
OP2: (15.687,-11.250,6.099)
C2: (22.736,-12.127,4.983)
C1': (21.689,-9.890,4.869)
C3': (20.042,-9.509,3.243)
O5': (17.821,-10.146,5.328)
O4': (20.565,-9.322,5.514)
C5': (18.220,-8.830,4.945)
P: (16.791,-10.365,6.550)
C4': (19.678,-8.764,4.514)
C2': (21.553,-9.539,3.388)
O2': (22.087,-8.258,3.120)
N1: (21.606,-11.349,5.100)
O4: (21.303,-15.293,5.716)
O2: (23.832,-11.674,4.701)
C6: (20.376,-11.895,5.415)
C5: (20.198,-13.202,5.634)
O3': (19.711,-8.687,2.155)
OP1: (18.107,-10.135,0.934)
OP2: (20.562,-9.925,0.167)
C3': (18.234,-5.541,-1.543)
C1': (19.754,-4.215,-0.460)
C5': (17.918,-7.156,0.389)
O6: (25.492,-4.859,-2.078)
O4': (19.219,-5.105,0.503)
C8: (21.588,-5.988,-0.601)
C2: (23.150,-2.181,-2.076)
C6: (24.400,-4.297,-1.903)
C5: (23.188,-4.818,-1.401)
C4: (22.109,-3.961,-1.291)
P: (19.328,-9.303,0.732)
C4': (18.036,-5.708,-0.054)
C2': (18.748,-4.118,-1.595)
O2': (17.776,-3.163,-1.193)
N1: (24.284,-2.944,-2.229)
N2: (23.281,-0.896,-2.455)
N3: (21.996,-2.643,-1.593)
N7: (22.845,-6.105,-0.961)
N9: (21.089,-4.725,-0.788)
O5': (19.014,-7.956,-0.072)
O3': (16.985,-5.694,-2.162)
OP2: (20.562,-9.925,0.167)
C3': (18.234,-5.541,-1.543)
C1': (19.754,-4.215,-0.460)
C5': (17.918,-7.156,0.389)
O6: (25.492,-4.859,-2.078)
O4': (19.219,-5.105,0.503)
C8: (21.588,-5.988,-0.601)
C2: (23.150,-2.181,-2.076)
C6: (24.400,-4.297,-1.903)
C5: (23.188,-4.818,-1.401)
C4: (22.109,-3.961,-1.291)
P: (19.328,-9.303,0.732)
C4': (18.036,-5.708,-0.054)
C2': (18.748,-4.118,-1.595)
O2': (17.776,-3.163,-1.193)
N1: (24.284,-2.944,-2.229)
N2: (23.281,-0.896,-2.455)
N3: (21.996,-2.643,-1.593)
N7: (22.845,-6.105,-0.961)
N9: (21.089,-4.725,-0.788)
O5': (19.014,-7.956,-0.072)
O3': (16.985,-5.694,-2.162)
Image (generated by PyMOL):