Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12000:12001
Extra
PDB:
ATOM 1 O3' C A1999 -22.566 -2.419 92.029 1.00 60.89 O
ATOM 2 P U A2000 -22.100 -3.840 92.644 1.00 52.06 P
ATOM 3 OP1 U A2000 -23.206 -4.778 92.462 1.00 52.29 O
ATOM 4 OP2 U A2000 -21.579 -3.617 94.015 1.00 52.11 O
ATOM 5 O5' U A2000 -20.937 -4.227 91.676 1.00 51.59 O
ATOM 6 C5' U A2000 -20.317 -5.466 91.752 1.00 51.37 C
ATOM 7 C4' U A2000 -18.897 -5.321 91.423 1.00 50.96 C
ATOM 8 O4' U A2000 -18.473 -3.982 91.759 1.00 50.96 O
ATOM 9 C3' U A2000 -17.985 -6.215 92.200 1.00 50.77 C
ATOM 10 O3' U A2000 -17.888 -7.469 91.608 1.00 50.62 O
ATOM 11 C2' U A2000 -16.663 -5.463 92.206 1.00 50.47 C
ATOM 12 O2' U A2000 -15.886 -5.772 91.030 1.00 50.12 O
ATOM 13 C1' U A2000 -17.120 -4.001 92.136 1.00 50.66 C
ATOM 14 N1 U A2000 -16.953 -3.296 93.412 1.00 50.83 N
ATOM 15 C2 U A2000 -15.640 -3.082 93.755 1.00 50.56 C
ATOM 16 O2 U A2000 -14.733 -3.478 93.053 1.00 50.22 O
ATOM 17 N3 U A2000 -15.364 -2.411 94.916 1.00 50.70 N
ATOM 18 C4 U A2000 -16.313 -1.932 95.740 1.00 51.09 C
ATOM 19 O4 U A2000 -15.940 -1.357 96.737 1.00 51.20 O
ATOM 20 C5 U A2000 -17.656 -2.184 95.324 1.00 51.35 C
ATOM 21 C6 U A2000 -17.950 -2.833 94.198 1.00 51.22 C
ATOM 22 P G A2001 -18.357 -8.724 92.408 1.00 54.38 P
ATOM 23 OP1 G A2001 -19.123 -8.199 93.568 1.00 54.75 O
ATOM 24 OP2 G A2001 -17.171 -9.577 92.657 1.00 54.09 O
ATOM 25 O5' G A2001 -19.315 -9.446 91.359 1.00 54.49 O
TER
ATOM 1 O3' U B2000 -17.888 -7.469 91.608 1.00 50.62 O
ATOM 2 P G B2001 -18.357 -8.724 92.408 1.00 54.38 P
ATOM 3 OP1 G B2001 -19.123 -8.199 93.568 1.00 54.75 O
ATOM 4 OP2 G B2001 -17.171 -9.577 92.657 1.00 54.09 O
ATOM 5 O5' G B2001 -19.315 -9.446 91.359 1.00 54.49 O
ATOM 6 C5' G B2001 -20.580 -8.913 91.015 1.00 54.80 C
ATOM 7 C4' G B2001 -21.084 -9.521 89.747 1.00 54.78 C
ATOM 8 O4' G B2001 -20.564 -8.783 88.625 1.00 54.54 O
ATOM 9 C3' G B2001 -20.662 -10.955 89.503 1.00 54.61 C
ATOM 10 O3' G B2001 -21.533 -11.881 90.128 1.00 54.90 O
ATOM 11 C2' G B2001 -20.667 -11.051 87.991 1.00 54.46 C
ATOM 12 O2' G B2001 -21.987 -11.237 87.512 1.00 54.77 O
ATOM 13 C1' G B2001 -20.207 -9.652 87.598 1.00 54.32 C
ATOM 14 N9 G B2001 -18.751 -9.560 87.438 1.00 53.92 N
ATOM 15 C8 G B2001 -17.992 -8.750 88.223 1.00 53.82 C
ATOM 16 N7 G B2001 -16.735 -8.758 87.912 1.00 53.47 N
ATOM 17 C5 G B2001 -16.661 -9.620 86.848 1.00 53.32 C
ATOM 18 C6 G B2001 -15.527 -9.995 86.129 1.00 52.97 C
ATOM 19 O6 G B2001 -14.363 -9.649 86.291 1.00 52.70 O
ATOM 20 N1 G B2001 -15.832 -10.880 85.146 1.00 52.94 N
ATOM 21 C2 G B2001 -17.086 -11.361 84.879 1.00 53.24 C
ATOM 22 N2 G B2001 -17.111 -12.225 83.848 1.00 53.16 N
ATOM 23 N3 G B2001 -18.197 -11.010 85.540 1.00 53.58 N
ATOM 24 C4 G B2001 -17.890 -10.132 86.525 1.00 53.60 C
ATOM 25 P C B2002 -20.991 -13.252 90.800 1.00 48.84 P
ATOM 26 OP1 C B2002 -22.159 -13.869 91.492 1.00 49.23 O
ATOM 27 OP2 C B2002 -19.797 -12.948 91.583 1.00 48.61 O
ATOM 28 O5' C B2002 -20.589 -14.104 89.538 1.00 48.59 O
TER
ATOM 2 P U A2000 -22.100 -3.840 92.644 1.00 52.06 P
ATOM 3 OP1 U A2000 -23.206 -4.778 92.462 1.00 52.29 O
ATOM 4 OP2 U A2000 -21.579 -3.617 94.015 1.00 52.11 O
ATOM 5 O5' U A2000 -20.937 -4.227 91.676 1.00 51.59 O
ATOM 6 C5' U A2000 -20.317 -5.466 91.752 1.00 51.37 C
ATOM 7 C4' U A2000 -18.897 -5.321 91.423 1.00 50.96 C
ATOM 8 O4' U A2000 -18.473 -3.982 91.759 1.00 50.96 O
ATOM 9 C3' U A2000 -17.985 -6.215 92.200 1.00 50.77 C
ATOM 10 O3' U A2000 -17.888 -7.469 91.608 1.00 50.62 O
ATOM 11 C2' U A2000 -16.663 -5.463 92.206 1.00 50.47 C
ATOM 12 O2' U A2000 -15.886 -5.772 91.030 1.00 50.12 O
ATOM 13 C1' U A2000 -17.120 -4.001 92.136 1.00 50.66 C
ATOM 14 N1 U A2000 -16.953 -3.296 93.412 1.00 50.83 N
ATOM 15 C2 U A2000 -15.640 -3.082 93.755 1.00 50.56 C
ATOM 16 O2 U A2000 -14.733 -3.478 93.053 1.00 50.22 O
ATOM 17 N3 U A2000 -15.364 -2.411 94.916 1.00 50.70 N
ATOM 18 C4 U A2000 -16.313 -1.932 95.740 1.00 51.09 C
ATOM 19 O4 U A2000 -15.940 -1.357 96.737 1.00 51.20 O
ATOM 20 C5 U A2000 -17.656 -2.184 95.324 1.00 51.35 C
ATOM 21 C6 U A2000 -17.950 -2.833 94.198 1.00 51.22 C
ATOM 22 P G A2001 -18.357 -8.724 92.408 1.00 54.38 P
ATOM 23 OP1 G A2001 -19.123 -8.199 93.568 1.00 54.75 O
ATOM 24 OP2 G A2001 -17.171 -9.577 92.657 1.00 54.09 O
ATOM 25 O5' G A2001 -19.315 -9.446 91.359 1.00 54.49 O
TER
ATOM 1 O3' U B2000 -17.888 -7.469 91.608 1.00 50.62 O
ATOM 2 P G B2001 -18.357 -8.724 92.408 1.00 54.38 P
ATOM 3 OP1 G B2001 -19.123 -8.199 93.568 1.00 54.75 O
ATOM 4 OP2 G B2001 -17.171 -9.577 92.657 1.00 54.09 O
ATOM 5 O5' G B2001 -19.315 -9.446 91.359 1.00 54.49 O
ATOM 6 C5' G B2001 -20.580 -8.913 91.015 1.00 54.80 C
ATOM 7 C4' G B2001 -21.084 -9.521 89.747 1.00 54.78 C
ATOM 8 O4' G B2001 -20.564 -8.783 88.625 1.00 54.54 O
ATOM 9 C3' G B2001 -20.662 -10.955 89.503 1.00 54.61 C
ATOM 10 O3' G B2001 -21.533 -11.881 90.128 1.00 54.90 O
ATOM 11 C2' G B2001 -20.667 -11.051 87.991 1.00 54.46 C
ATOM 12 O2' G B2001 -21.987 -11.237 87.512 1.00 54.77 O
ATOM 13 C1' G B2001 -20.207 -9.652 87.598 1.00 54.32 C
ATOM 14 N9 G B2001 -18.751 -9.560 87.438 1.00 53.92 N
ATOM 15 C8 G B2001 -17.992 -8.750 88.223 1.00 53.82 C
ATOM 16 N7 G B2001 -16.735 -8.758 87.912 1.00 53.47 N
ATOM 17 C5 G B2001 -16.661 -9.620 86.848 1.00 53.32 C
ATOM 18 C6 G B2001 -15.527 -9.995 86.129 1.00 52.97 C
ATOM 19 O6 G B2001 -14.363 -9.649 86.291 1.00 52.70 O
ATOM 20 N1 G B2001 -15.832 -10.880 85.146 1.00 52.94 N
ATOM 21 C2 G B2001 -17.086 -11.361 84.879 1.00 53.24 C
ATOM 22 N2 G B2001 -17.111 -12.225 83.848 1.00 53.16 N
ATOM 23 N3 G B2001 -18.197 -11.010 85.540 1.00 53.58 N
ATOM 24 C4 G B2001 -17.890 -10.132 86.525 1.00 53.60 C
ATOM 25 P C B2002 -20.991 -13.252 90.800 1.00 48.84 P
ATOM 26 OP1 C B2002 -22.159 -13.869 91.492 1.00 49.23 O
ATOM 27 OP2 C B2002 -19.797 -12.948 91.583 1.00 48.61 O
ATOM 28 O5' C B2002 -20.589 -14.104 89.538 1.00 48.59 O
TER
Atoms:
C4: (-16.313,-1.932,95.740)
N3: (-15.364,-2.411,94.916)
OP1: (-23.206,-4.778,92.462)
OP2: (-21.579,-3.617,94.015)
C2: (-15.640,-3.082,93.755)
C1': (-17.120,-4.001,92.136)
C3': (-17.985,-6.215,92.200)
O5': (-20.937,-4.227,91.676)
O4': (-18.473,-3.982,91.759)
C5': (-20.317,-5.466,91.752)
P: (-22.100,-3.840,92.644)
C4': (-18.897,-5.321,91.423)
C2': (-16.663,-5.463,92.206)
O2': (-15.886,-5.772,91.030)
N1: (-16.953,-3.296,93.412)
O4: (-15.940,-1.357,96.737)
O2: (-14.733,-3.478,93.053)
C6: (-17.950,-2.833,94.198)
C5: (-17.656,-2.184,95.324)
O3': (-17.888,-7.469,91.608)
N3: (-15.364,-2.411,94.916)
OP1: (-23.206,-4.778,92.462)
OP2: (-21.579,-3.617,94.015)
C2: (-15.640,-3.082,93.755)
C1': (-17.120,-4.001,92.136)
C3': (-17.985,-6.215,92.200)
O5': (-20.937,-4.227,91.676)
O4': (-18.473,-3.982,91.759)
C5': (-20.317,-5.466,91.752)
P: (-22.100,-3.840,92.644)
C4': (-18.897,-5.321,91.423)
C2': (-16.663,-5.463,92.206)
O2': (-15.886,-5.772,91.030)
N1: (-16.953,-3.296,93.412)
O4: (-15.940,-1.357,96.737)
O2: (-14.733,-3.478,93.053)
C6: (-17.950,-2.833,94.198)
C5: (-17.656,-2.184,95.324)
O3': (-17.888,-7.469,91.608)
OP1: (-19.123,-8.199,93.568)
OP2: (-17.171,-9.577,92.657)
C3': (-20.662,-10.955,89.503)
C1': (-20.207,-9.652,87.598)
C5': (-20.580,-8.913,91.015)
O6: (-14.363,-9.649,86.291)
O4': (-20.564,-8.783,88.625)
C8: (-17.992,-8.750,88.223)
C2: (-17.086,-11.361,84.879)
C6: (-15.527,-9.995,86.129)
C5: (-16.661,-9.620,86.848)
C4: (-17.890,-10.132,86.525)
P: (-18.357,-8.724,92.408)
C4': (-21.084,-9.521,89.747)
C2': (-20.667,-11.051,87.991)
O2': (-21.987,-11.237,87.512)
N1: (-15.832,-10.880,85.146)
N2: (-17.111,-12.225,83.848)
N3: (-18.197,-11.010,85.540)
N7: (-16.735,-8.758,87.912)
N9: (-18.751,-9.560,87.438)
O5': (-19.315,-9.446,91.359)
O3': (-21.533,-11.881,90.128)
OP2: (-17.171,-9.577,92.657)
C3': (-20.662,-10.955,89.503)
C1': (-20.207,-9.652,87.598)
C5': (-20.580,-8.913,91.015)
O6: (-14.363,-9.649,86.291)
O4': (-20.564,-8.783,88.625)
C8: (-17.992,-8.750,88.223)
C2: (-17.086,-11.361,84.879)
C6: (-15.527,-9.995,86.129)
C5: (-16.661,-9.620,86.848)
C4: (-17.890,-10.132,86.525)
P: (-18.357,-8.724,92.408)
C4': (-21.084,-9.521,89.747)
C2': (-20.667,-11.051,87.991)
O2': (-21.987,-11.237,87.512)
N1: (-15.832,-10.880,85.146)
N2: (-17.111,-12.225,83.848)
N3: (-18.197,-11.010,85.540)
N7: (-16.735,-8.758,87.912)
N9: (-18.751,-9.560,87.438)
O5': (-19.315,-9.446,91.359)
O3': (-21.533,-11.881,90.128)
Image (generated by PyMOL):