Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:01235:01238
Extra
PDB:
ATOM 1 O3' C A1234 2.507 82.391 63.076 1.00 46.20 O
ATOM 2 P U A1235 3.477 82.188 61.810 1.00 48.04 P
ATOM 3 OP1 U A1235 2.666 81.682 60.674 1.00 47.82 O
ATOM 4 OP2 U A1235 4.655 81.410 62.260 1.00 47.08 O
ATOM 5 O5' U A1235 3.954 83.674 61.473 1.00 47.71 O
ATOM 6 C5' U A1235 2.986 84.727 61.262 1.00 48.00 C
ATOM 7 C4' U A1235 3.672 86.064 61.068 1.00 49.05 C
ATOM 8 O4' U A1235 4.225 86.551 62.322 1.00 49.22 O
ATOM 9 C3' U A1235 4.853 86.095 60.112 1.00 49.61 C
ATOM 10 O3' U A1235 4.447 86.113 58.752 1.00 49.99 O
ATOM 11 C2' U A1235 5.552 87.380 60.531 1.00 50.10 C
ATOM 12 O2' U A1235 4.898 88.535 60.040 1.00 50.42 O
ATOM 13 C1' U A1235 5.390 87.320 62.054 1.00 49.90 C
ATOM 14 N1 U A1235 6.545 86.683 62.708 1.00 49.82 N
ATOM 15 C2 U A1235 7.518 87.510 63.259 1.00 50.19 C
ATOM 16 O2 U A1235 7.442 88.730 63.247 1.00 48.47 O
ATOM 17 N3 U A1235 8.586 86.852 63.823 1.00 50.21 N
ATOM 18 C4 U A1235 8.777 85.487 63.898 1.00 50.19 C
ATOM 19 O4 U A1235 9.791 85.047 64.442 1.00 51.93 O
ATOM 20 C5 U A1235 7.729 84.705 63.321 1.00 50.88 C
ATOM 21 C6 U A1235 6.676 85.312 62.762 1.00 50.24 C
ATOM 22 P C A1236 5.317 85.329 57.652 1.00 50.77 P
ATOM 23 OP1 C A1236 4.569 85.361 56.369 1.00 50.30 O
ATOM 24 OP2 C A1236 5.715 84.018 58.232 1.00 50.32 O
ATOM 25 O5' C A1236 6.610 86.248 57.503 1.00 51.38 O
TER
ATOM 1 O3' A B1237 11.937 90.513 63.207 1.00 69.32 O
ATOM 2 P U B1238 11.547 89.935 64.654 1.00 74.66 P
ATOM 3 OP1 U B1238 11.604 88.449 64.561 1.00 72.48 O
ATOM 4 OP2 U B1238 10.288 90.598 65.099 1.00 73.05 O
ATOM 5 O5' U B1238 12.760 90.432 65.569 1.00 79.71 O
ATOM 6 C5' U B1238 12.589 91.447 66.603 1.00 87.20 C
ATOM 7 C4' U B1238 13.428 92.681 66.296 1.00 91.22 C
ATOM 8 O4' U B1238 14.649 92.272 65.621 1.00 92.87 O
ATOM 9 C3' U B1238 12.794 93.708 65.361 1.00 93.17 C
ATOM 10 O3' U B1238 12.003 94.654 66.090 1.00 93.39 O
ATOM 11 C2' U B1238 14.008 94.388 64.740 1.00 94.41 C
ATOM 12 O2' U B1238 14.587 95.377 65.572 1.00 95.38 O
ATOM 13 C1' U B1238 14.986 93.215 64.613 1.00 95.38 C
ATOM 14 N1 U B1238 15.001 92.526 63.305 1.00 97.58 N
ATOM 15 C2 U B1238 15.041 93.297 62.137 1.00 98.80 C
ATOM 16 O2 U B1238 15.044 94.522 62.134 1.00 99.49 O
ATOM 17 N3 U B1238 15.078 92.574 60.969 1.00 99.38 N
ATOM 18 C4 U B1238 15.077 91.198 60.837 1.00 99.77 C
ATOM 19 O4 U B1238 15.139 90.697 59.710 1.00100.07 O
ATOM 20 C5 U B1238 15.024 90.478 62.075 1.00 98.81 C
ATOM 21 C6 U B1238 14.988 91.145 63.233 1.00 97.72 C
ATOM 22 P A B1239 10.416 94.748 65.839 1.00 93.08 P
ATOM 23 OP1 A B1239 9.863 95.625 66.902 1.00 93.57 O
ATOM 24 OP2 A B1239 9.889 93.368 65.683 1.00 93.78 O
ATOM 25 O5' A B1239 10.266 95.498 64.440 1.00 90.41 O
TER
ATOM 2 P U A1235 3.477 82.188 61.810 1.00 48.04 P
ATOM 3 OP1 U A1235 2.666 81.682 60.674 1.00 47.82 O
ATOM 4 OP2 U A1235 4.655 81.410 62.260 1.00 47.08 O
ATOM 5 O5' U A1235 3.954 83.674 61.473 1.00 47.71 O
ATOM 6 C5' U A1235 2.986 84.727 61.262 1.00 48.00 C
ATOM 7 C4' U A1235 3.672 86.064 61.068 1.00 49.05 C
ATOM 8 O4' U A1235 4.225 86.551 62.322 1.00 49.22 O
ATOM 9 C3' U A1235 4.853 86.095 60.112 1.00 49.61 C
ATOM 10 O3' U A1235 4.447 86.113 58.752 1.00 49.99 O
ATOM 11 C2' U A1235 5.552 87.380 60.531 1.00 50.10 C
ATOM 12 O2' U A1235 4.898 88.535 60.040 1.00 50.42 O
ATOM 13 C1' U A1235 5.390 87.320 62.054 1.00 49.90 C
ATOM 14 N1 U A1235 6.545 86.683 62.708 1.00 49.82 N
ATOM 15 C2 U A1235 7.518 87.510 63.259 1.00 50.19 C
ATOM 16 O2 U A1235 7.442 88.730 63.247 1.00 48.47 O
ATOM 17 N3 U A1235 8.586 86.852 63.823 1.00 50.21 N
ATOM 18 C4 U A1235 8.777 85.487 63.898 1.00 50.19 C
ATOM 19 O4 U A1235 9.791 85.047 64.442 1.00 51.93 O
ATOM 20 C5 U A1235 7.729 84.705 63.321 1.00 50.88 C
ATOM 21 C6 U A1235 6.676 85.312 62.762 1.00 50.24 C
ATOM 22 P C A1236 5.317 85.329 57.652 1.00 50.77 P
ATOM 23 OP1 C A1236 4.569 85.361 56.369 1.00 50.30 O
ATOM 24 OP2 C A1236 5.715 84.018 58.232 1.00 50.32 O
ATOM 25 O5' C A1236 6.610 86.248 57.503 1.00 51.38 O
TER
ATOM 1 O3' A B1237 11.937 90.513 63.207 1.00 69.32 O
ATOM 2 P U B1238 11.547 89.935 64.654 1.00 74.66 P
ATOM 3 OP1 U B1238 11.604 88.449 64.561 1.00 72.48 O
ATOM 4 OP2 U B1238 10.288 90.598 65.099 1.00 73.05 O
ATOM 5 O5' U B1238 12.760 90.432 65.569 1.00 79.71 O
ATOM 6 C5' U B1238 12.589 91.447 66.603 1.00 87.20 C
ATOM 7 C4' U B1238 13.428 92.681 66.296 1.00 91.22 C
ATOM 8 O4' U B1238 14.649 92.272 65.621 1.00 92.87 O
ATOM 9 C3' U B1238 12.794 93.708 65.361 1.00 93.17 C
ATOM 10 O3' U B1238 12.003 94.654 66.090 1.00 93.39 O
ATOM 11 C2' U B1238 14.008 94.388 64.740 1.00 94.41 C
ATOM 12 O2' U B1238 14.587 95.377 65.572 1.00 95.38 O
ATOM 13 C1' U B1238 14.986 93.215 64.613 1.00 95.38 C
ATOM 14 N1 U B1238 15.001 92.526 63.305 1.00 97.58 N
ATOM 15 C2 U B1238 15.041 93.297 62.137 1.00 98.80 C
ATOM 16 O2 U B1238 15.044 94.522 62.134 1.00 99.49 O
ATOM 17 N3 U B1238 15.078 92.574 60.969 1.00 99.38 N
ATOM 18 C4 U B1238 15.077 91.198 60.837 1.00 99.77 C
ATOM 19 O4 U B1238 15.139 90.697 59.710 1.00100.07 O
ATOM 20 C5 U B1238 15.024 90.478 62.075 1.00 98.81 C
ATOM 21 C6 U B1238 14.988 91.145 63.233 1.00 97.72 C
ATOM 22 P A B1239 10.416 94.748 65.839 1.00 93.08 P
ATOM 23 OP1 A B1239 9.863 95.625 66.902 1.00 93.57 O
ATOM 24 OP2 A B1239 9.889 93.368 65.683 1.00 93.78 O
ATOM 25 O5' A B1239 10.266 95.498 64.440 1.00 90.41 O
TER
Atoms:
C4: (8.777,85.487,63.898)
N3: (8.586,86.852,63.823)
OP1: (2.666,81.682,60.674)
OP2: (4.655,81.410,62.260)
C2: (7.518,87.510,63.259)
C1': (5.390,87.320,62.054)
C3': (4.853,86.095,60.112)
O5': (3.954,83.674,61.473)
O4': (4.225,86.551,62.322)
C5': (2.986,84.727,61.262)
P: (3.477,82.188,61.810)
C4': (3.672,86.064,61.068)
C2': (5.552,87.380,60.531)
O2': (4.898,88.535,60.040)
N1: (6.545,86.683,62.708)
O4: (9.791,85.047,64.442)
O2: (7.442,88.730,63.247)
C6: (6.676,85.312,62.762)
C5: (7.729,84.705,63.321)
O3': (4.447,86.113,58.752)
N3: (8.586,86.852,63.823)
OP1: (2.666,81.682,60.674)
OP2: (4.655,81.410,62.260)
C2: (7.518,87.510,63.259)
C1': (5.390,87.320,62.054)
C3': (4.853,86.095,60.112)
O5': (3.954,83.674,61.473)
O4': (4.225,86.551,62.322)
C5': (2.986,84.727,61.262)
P: (3.477,82.188,61.810)
C4': (3.672,86.064,61.068)
C2': (5.552,87.380,60.531)
O2': (4.898,88.535,60.040)
N1: (6.545,86.683,62.708)
O4: (9.791,85.047,64.442)
O2: (7.442,88.730,63.247)
C6: (6.676,85.312,62.762)
C5: (7.729,84.705,63.321)
O3': (4.447,86.113,58.752)
C4: (15.077,91.198,60.837)
N3: (15.078,92.574,60.969)
OP1: (11.604,88.449,64.561)
OP2: (10.288,90.598,65.099)
C2: (15.041,93.297,62.137)
C1': (14.986,93.215,64.613)
C3': (12.794,93.708,65.361)
O5': (12.760,90.432,65.569)
O4': (14.649,92.272,65.621)
C5': (12.589,91.447,66.603)
P: (11.547,89.935,64.654)
C4': (13.428,92.681,66.296)
C2': (14.008,94.388,64.740)
O2': (14.587,95.377,65.572)
N1: (15.001,92.526,63.305)
O4: (15.139,90.697,59.710)
O2: (15.044,94.522,62.134)
C6: (14.988,91.145,63.233)
C5: (15.024,90.478,62.075)
O3': (12.003,94.654,66.090)
N3: (15.078,92.574,60.969)
OP1: (11.604,88.449,64.561)
OP2: (10.288,90.598,65.099)
C2: (15.041,93.297,62.137)
C1': (14.986,93.215,64.613)
C3': (12.794,93.708,65.361)
O5': (12.760,90.432,65.569)
O4': (14.649,92.272,65.621)
C5': (12.589,91.447,66.603)
P: (11.547,89.935,64.654)
C4': (13.428,92.681,66.296)
C2': (14.008,94.388,64.740)
O2': (14.587,95.377,65.572)
N1: (15.001,92.526,63.305)
O4: (15.139,90.697,59.710)
O2: (15.044,94.522,62.134)
C6: (14.988,91.145,63.233)
C5: (15.024,90.478,62.075)
O3': (12.003,94.654,66.090)
Image (generated by PyMOL):