Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1554:A1557
Extra
PDB:
ATOM 1 O3' G A1553 129.178 181.754 79.343 1.00 60.80 O
ATOM 2 P U A1554 128.367 181.737 80.723 1.00 60.53 P
ATOM 3 OP1 U A1554 127.350 182.813 80.669 1.00 59.85 O
ATOM 4 OP2 U A1554 129.368 181.725 81.819 1.00 61.80 O
ATOM 5 O5' U A1554 127.604 180.343 80.678 1.00 61.37 O
ATOM 6 C5' U A1554 126.709 180.045 79.598 1.00 63.36 C
ATOM 7 C4' U A1554 126.072 178.682 79.794 1.00 64.79 C
ATOM 8 O4' U A1554 127.088 177.645 79.811 1.00 65.39 O
ATOM 9 C3' U A1554 125.301 178.454 81.085 1.00 64.12 C
ATOM 10 O3' U A1554 123.994 179.007 80.984 1.00 61.63 O
ATOM 11 C2' U A1554 125.260 176.933 81.162 1.00 65.35 C
ATOM 12 O2' U A1554 124.298 176.402 80.276 1.00 67.15 O
ATOM 13 C1' U A1554 126.642 176.568 80.616 1.00 66.16 C
ATOM 14 N1 U A1554 127.662 176.281 81.636 1.00 67.18 N
ATOM 15 C2 U A1554 127.637 175.023 82.209 1.00 67.32 C
ATOM 16 O2 U A1554 126.770 174.205 81.964 1.00 67.86 O
ATOM 17 N3 U A1554 128.652 174.770 83.091 1.00 65.74 N
ATOM 18 C4 U A1554 129.647 175.640 83.484 1.00 64.68 C
ATOM 19 O4 U A1554 130.430 175.286 84.360 1.00 64.50 O
ATOM 20 C5 U A1554 129.590 176.937 82.879 1.00 65.02 C
ATOM 21 C6 U A1554 128.625 177.209 81.997 1.00 66.35 C
ATOM 22 P A A1555 123.291 179.609 82.286 1.00 59.64 P
ATOM 23 OP1 A A1555 122.013 180.217 81.858 1.00 59.64 O
ATOM 24 OP2 A A1555 124.295 180.424 83.007 1.00 59.82 O
ATOM 25 O5' A A1555 122.959 178.345 83.188 1.00 57.37 O
TER
ATOM 1 O3' A B1556 126.671 170.641 84.851 1.00 50.42 O
ATOM 2 P U B1557 128.176 170.768 84.300 1.00 47.14 P
ATOM 3 OP1 U B1557 129.062 170.214 85.356 1.00 47.37 O
ATOM 4 OP2 U B1557 128.394 172.144 83.819 1.00 48.14 O
ATOM 5 O5' U B1557 128.205 169.839 83.001 1.00 48.12 O
ATOM 6 C5' U B1557 127.865 168.438 83.065 1.00 49.03 C
ATOM 7 C4' U B1557 127.631 167.872 81.674 1.00 50.01 C
ATOM 8 O4' U B1557 126.619 168.664 80.984 1.00 50.37 O
ATOM 9 C3' U B1557 128.807 167.891 80.711 1.00 50.76 C
ATOM 10 O3' U B1557 129.688 166.788 80.883 1.00 53.84 O
ATOM 11 C2' U B1557 128.124 167.813 79.351 1.00 50.30 C
ATOM 12 O2' U B1557 127.752 166.517 78.951 1.00 51.30 O
ATOM 13 C1' U B1557 126.866 168.644 79.582 1.00 49.41 C
ATOM 14 N1 U B1557 127.037 170.018 79.086 1.00 48.81 N
ATOM 15 C2 U B1557 127.038 170.198 77.713 1.00 48.57 C
ATOM 16 O2 U B1557 126.855 169.285 76.924 1.00 49.26 O
ATOM 17 N3 U B1557 127.261 171.483 77.300 1.00 47.65 N
ATOM 18 C4 U B1557 127.480 172.586 78.095 1.00 48.95 C
ATOM 19 O4 U B1557 127.834 173.641 77.571 1.00 52.03 O
ATOM 20 C5 U B1557 127.426 172.332 79.498 1.00 49.73 C
ATOM 21 C6 U B1557 127.212 171.087 79.939 1.00 49.66 C
ATOM 22 P G B1558 131.114 166.792 80.134 1.00 57.80 P
ATOM 23 OP1 G B1558 131.754 165.458 80.274 1.00 57.27 O
ATOM 24 OP2 G B1558 131.848 168.013 80.558 1.00 59.39 O
ATOM 25 O5' G B1558 130.765 166.961 78.593 1.00 56.00 O
TER
ATOM 2 P U A1554 128.367 181.737 80.723 1.00 60.53 P
ATOM 3 OP1 U A1554 127.350 182.813 80.669 1.00 59.85 O
ATOM 4 OP2 U A1554 129.368 181.725 81.819 1.00 61.80 O
ATOM 5 O5' U A1554 127.604 180.343 80.678 1.00 61.37 O
ATOM 6 C5' U A1554 126.709 180.045 79.598 1.00 63.36 C
ATOM 7 C4' U A1554 126.072 178.682 79.794 1.00 64.79 C
ATOM 8 O4' U A1554 127.088 177.645 79.811 1.00 65.39 O
ATOM 9 C3' U A1554 125.301 178.454 81.085 1.00 64.12 C
ATOM 10 O3' U A1554 123.994 179.007 80.984 1.00 61.63 O
ATOM 11 C2' U A1554 125.260 176.933 81.162 1.00 65.35 C
ATOM 12 O2' U A1554 124.298 176.402 80.276 1.00 67.15 O
ATOM 13 C1' U A1554 126.642 176.568 80.616 1.00 66.16 C
ATOM 14 N1 U A1554 127.662 176.281 81.636 1.00 67.18 N
ATOM 15 C2 U A1554 127.637 175.023 82.209 1.00 67.32 C
ATOM 16 O2 U A1554 126.770 174.205 81.964 1.00 67.86 O
ATOM 17 N3 U A1554 128.652 174.770 83.091 1.00 65.74 N
ATOM 18 C4 U A1554 129.647 175.640 83.484 1.00 64.68 C
ATOM 19 O4 U A1554 130.430 175.286 84.360 1.00 64.50 O
ATOM 20 C5 U A1554 129.590 176.937 82.879 1.00 65.02 C
ATOM 21 C6 U A1554 128.625 177.209 81.997 1.00 66.35 C
ATOM 22 P A A1555 123.291 179.609 82.286 1.00 59.64 P
ATOM 23 OP1 A A1555 122.013 180.217 81.858 1.00 59.64 O
ATOM 24 OP2 A A1555 124.295 180.424 83.007 1.00 59.82 O
ATOM 25 O5' A A1555 122.959 178.345 83.188 1.00 57.37 O
TER
ATOM 1 O3' A B1556 126.671 170.641 84.851 1.00 50.42 O
ATOM 2 P U B1557 128.176 170.768 84.300 1.00 47.14 P
ATOM 3 OP1 U B1557 129.062 170.214 85.356 1.00 47.37 O
ATOM 4 OP2 U B1557 128.394 172.144 83.819 1.00 48.14 O
ATOM 5 O5' U B1557 128.205 169.839 83.001 1.00 48.12 O
ATOM 6 C5' U B1557 127.865 168.438 83.065 1.00 49.03 C
ATOM 7 C4' U B1557 127.631 167.872 81.674 1.00 50.01 C
ATOM 8 O4' U B1557 126.619 168.664 80.984 1.00 50.37 O
ATOM 9 C3' U B1557 128.807 167.891 80.711 1.00 50.76 C
ATOM 10 O3' U B1557 129.688 166.788 80.883 1.00 53.84 O
ATOM 11 C2' U B1557 128.124 167.813 79.351 1.00 50.30 C
ATOM 12 O2' U B1557 127.752 166.517 78.951 1.00 51.30 O
ATOM 13 C1' U B1557 126.866 168.644 79.582 1.00 49.41 C
ATOM 14 N1 U B1557 127.037 170.018 79.086 1.00 48.81 N
ATOM 15 C2 U B1557 127.038 170.198 77.713 1.00 48.57 C
ATOM 16 O2 U B1557 126.855 169.285 76.924 1.00 49.26 O
ATOM 17 N3 U B1557 127.261 171.483 77.300 1.00 47.65 N
ATOM 18 C4 U B1557 127.480 172.586 78.095 1.00 48.95 C
ATOM 19 O4 U B1557 127.834 173.641 77.571 1.00 52.03 O
ATOM 20 C5 U B1557 127.426 172.332 79.498 1.00 49.73 C
ATOM 21 C6 U B1557 127.212 171.087 79.939 1.00 49.66 C
ATOM 22 P G B1558 131.114 166.792 80.134 1.00 57.80 P
ATOM 23 OP1 G B1558 131.754 165.458 80.274 1.00 57.27 O
ATOM 24 OP2 G B1558 131.848 168.013 80.558 1.00 59.39 O
ATOM 25 O5' G B1558 130.765 166.961 78.593 1.00 56.00 O
TER
Atoms:
C4: (129.647,175.640,83.484)
N3: (128.652,174.770,83.091)
OP1: (127.350,182.813,80.669)
OP2: (129.368,181.725,81.819)
C2: (127.637,175.023,82.209)
C1': (126.642,176.568,80.616)
C3': (125.301,178.454,81.085)
O5': (127.604,180.343,80.678)
O4': (127.088,177.645,79.811)
C5': (126.709,180.045,79.598)
P: (128.367,181.737,80.723)
C4': (126.072,178.682,79.794)
C2': (125.260,176.933,81.162)
O2': (124.298,176.402,80.276)
N1: (127.662,176.281,81.636)
O4: (130.430,175.286,84.360)
O2: (126.770,174.205,81.964)
C6: (128.625,177.209,81.997)
C5: (129.590,176.937,82.879)
O3': (123.994,179.007,80.984)
N3: (128.652,174.770,83.091)
OP1: (127.350,182.813,80.669)
OP2: (129.368,181.725,81.819)
C2: (127.637,175.023,82.209)
C1': (126.642,176.568,80.616)
C3': (125.301,178.454,81.085)
O5': (127.604,180.343,80.678)
O4': (127.088,177.645,79.811)
C5': (126.709,180.045,79.598)
P: (128.367,181.737,80.723)
C4': (126.072,178.682,79.794)
C2': (125.260,176.933,81.162)
O2': (124.298,176.402,80.276)
N1: (127.662,176.281,81.636)
O4: (130.430,175.286,84.360)
O2: (126.770,174.205,81.964)
C6: (128.625,177.209,81.997)
C5: (129.590,176.937,82.879)
O3': (123.994,179.007,80.984)
C4: (127.480,172.586,78.095)
N3: (127.261,171.483,77.300)
OP1: (129.062,170.214,85.356)
OP2: (128.394,172.144,83.819)
C2: (127.038,170.198,77.713)
C1': (126.866,168.644,79.582)
C3': (128.807,167.891,80.711)
O5': (128.205,169.839,83.001)
O4': (126.619,168.664,80.984)
C5': (127.865,168.438,83.065)
P: (128.176,170.768,84.300)
C4': (127.631,167.872,81.674)
C2': (128.124,167.813,79.351)
O2': (127.752,166.517,78.951)
N1: (127.037,170.018,79.086)
O4: (127.834,173.641,77.571)
O2: (126.855,169.285,76.924)
C6: (127.212,171.087,79.939)
C5: (127.426,172.332,79.498)
O3': (129.688,166.788,80.883)
N3: (127.261,171.483,77.300)
OP1: (129.062,170.214,85.356)
OP2: (128.394,172.144,83.819)
C2: (127.038,170.198,77.713)
C1': (126.866,168.644,79.582)
C3': (128.807,167.891,80.711)
O5': (128.205,169.839,83.001)
O4': (126.619,168.664,80.984)
C5': (127.865,168.438,83.065)
P: (128.176,170.768,84.300)
C4': (127.631,167.872,81.674)
C2': (128.124,167.813,79.351)
O2': (127.752,166.517,78.951)
N1: (127.037,170.018,79.086)
O4: (127.834,173.641,77.571)
O2: (126.855,169.285,76.924)
C6: (127.212,171.087,79.939)
C5: (127.426,172.332,79.498)
O3': (129.688,166.788,80.883)
Image (generated by PyMOL):