ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1949:A1923

Extra

PDB:
ATOM 1 O3' C A1948 112.993 117.913 118.982 1.00 60.46 O
ATOM 2 P U A1949 113.461 117.146 117.662 1.00 61.95 P
ATOM 3 OP1 U A1949 114.269 115.966 118.060 1.00 62.02 O
ATOM 4 OP2 U A1949 114.035 118.158 116.737 1.00 59.16 O
ATOM 5 O5' U A1949 112.096 116.580 117.048 1.00 65.34 O
ATOM 6 C5' U A1949 111.374 115.509 117.715 1.00 68.75 C
ATOM 7 C4' U A1949 110.075 115.169 117.001 1.00 71.58 C
ATOM 8 O4' U A1949 109.175 116.302 117.041 1.00 72.33 O
ATOM 9 C3' U A1949 110.157 114.780 115.533 1.00 73.21 C
ATOM 10 O3' U A1949 110.445 113.402 115.350 1.00 75.65 O
ATOM 11 C2' U A1949 108.762 115.109 115.015 1.00 73.42 C
ATOM 12 O2' U A1949 107.799 114.083 115.179 1.00 74.79 O
ATOM 13 C1' U A1949 108.396 116.334 115.856 1.00 72.74 C
ATOM 14 N1 U A1949 108.725 117.564 115.124 1.00 72.02 N
ATOM 15 C2 U A1949 107.716 118.205 114.414 1.00 71.80 C
ATOM 16 O2 U A1949 106.553 117.831 114.423 1.00 73.25 O
ATOM 17 N3 U A1949 108.124 119.304 113.700 1.00 70.58 N
ATOM 18 C4 U A1949 109.403 119.818 113.636 1.00 70.96 C
ATOM 19 O4 U A1949 109.647 120.752 112.867 1.00 70.03 O
ATOM 20 C5 U A1949 110.365 119.121 114.430 1.00 71.01 C
ATOM 21 C6 U A1949 110.002 118.050 115.125 1.00 71.17 C
ATOM 22 P U A1950 110.872 112.866 113.899 1.00 77.94 P
ATOM 23 OP1 U A1950 111.714 111.677 114.150 1.00 79.19 O
ATOM 24 OP2 U A1950 111.442 114.018 113.157 1.00 76.24 O
ATOM 25 O5' U A1950 109.498 112.371 113.233 1.00 80.40 O
TER

ATOM 1 O3' G B1922 105.948 122.124 110.765 1.00 52.97 O
ATOM 2 P U B1923 105.406 122.009 112.282 1.00 51.53 P
ATOM 3 OP1 U B1923 104.523 123.157 112.565 1.00 51.75 O
ATOM 4 OP2 U B1923 106.545 121.719 113.193 1.00 51.66 O
ATOM 5 O5' U B1923 104.476 120.724 112.248 1.00 52.69 O
ATOM 6 C5' U B1923 103.621 120.475 111.128 1.00 52.25 C
ATOM 7 C4' U B1923 102.208 120.248 111.588 1.00 52.51 C
ATOM 8 O4' U B1923 102.121 118.943 112.225 1.00 53.81 O
ATOM 9 C3' U B1923 101.640 121.272 112.570 1.00 51.66 C
ATOM 10 O3' U B1923 100.291 121.573 112.204 1.00 52.77 O
ATOM 11 C2' U B1923 101.695 120.513 113.901 1.00 52.05 C
ATOM 12 O2' U B1923 100.698 120.844 114.832 1.00 52.33 O
ATOM 13 C1' U B1923 101.462 119.071 113.465 1.00 53.44 C
ATOM 14 N1 U B1923 101.961 118.055 114.413 1.00 55.78 N
ATOM 15 C2 U B1923 101.015 117.284 115.101 1.00 56.56 C
ATOM 16 O2 U B1923 99.818 117.431 114.976 1.00 56.59 O
ATOM 17 N3 U B1923 101.531 116.333 115.945 1.00 57.86 N
ATOM 18 C4 U B1923 102.859 116.068 116.178 1.00 58.69 C
ATOM 19 O4 U B1923 103.162 115.087 116.863 1.00 60.78 O
ATOM 20 C5 U B1923 103.776 116.918 115.462 1.00 57.72 C
ATOM 21 C6 U B1923 103.309 117.853 114.625 1.00 56.47 C
ATOM 22 P A B1924 99.897 123.031 111.614 1.00 52.19 P
ATOM 23 OP1 A B1924 100.195 124.077 112.638 1.00 52.69 O
ATOM 24 OP2 A B1924 98.506 122.846 111.158 1.00 52.89 O
ATOM 25 O5' A B1924 100.807 123.219 110.318 1.00 49.69 O
TER

Atoms:
C4: (109.403,119.818,113.636)
N3: (108.124,119.304,113.700)
OP1: (114.269,115.966,118.060)
OP2: (114.035,118.158,116.737)
C2: (107.716,118.205,114.414)
C1': (108.396,116.334,115.856)
C3': (110.157,114.780,115.533)
O5': (112.096,116.580,117.048)
O4': (109.175,116.302,117.041)
C5': (111.374,115.509,117.715)
P: (113.461,117.146,117.662)
C4': (110.075,115.169,117.001)
C2': (108.762,115.109,115.015)
O2': (107.799,114.083,115.179)
N1: (108.725,117.564,115.124)
O4: (109.647,120.752,112.867)
O2: (106.553,117.831,114.423)
C6: (110.002,118.050,115.125)
C5: (110.365,119.121,114.430)
O3': (110.445,113.402,115.350)
C4: (102.859,116.068,116.178)
N3: (101.531,116.333,115.945)
OP1: (104.523,123.157,112.565)
OP2: (106.545,121.719,113.193)
C2: (101.015,117.284,115.101)
C1': (101.462,119.071,113.465)
C3': (101.640,121.272,112.570)
O5': (104.476,120.724,112.248)
O4': (102.121,118.943,112.225)
C5': (103.621,120.475,111.128)
P: (105.406,122.009,112.282)
C4': (102.208,120.248,111.588)
C2': (101.695,120.513,113.901)
O2': (100.698,120.844,114.832)
N1: (101.961,118.055,114.413)
O4: (103.162,115.087,116.863)
O2: (99.818,117.431,114.976)
C6: (103.309,117.853,114.625)
C5: (103.776,116.918,115.462)
O3': (100.291,121.573,112.204)
Image (generated by PyMOL):
PyMOL image
show in jmol