Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1N8R:A1235:A1238
Extra
PDB:
ATOM 1 O3' C A1234 2.670 83.264 63.720 1.00 44.60 O
ATOM 2 P U A1235 3.573 83.008 62.436 1.00 45.33 P
ATOM 3 OP1 U A1235 2.659 82.502 61.381 1.00 46.84 O
ATOM 4 OP2 U A1235 4.729 82.177 62.885 1.00 45.44 O
ATOM 5 O5' U A1235 4.085 84.464 62.045 1.00 46.08 O
ATOM 6 C5' U A1235 3.147 85.545 61.856 1.00 46.55 C
ATOM 7 C4' U A1235 3.876 86.849 61.614 1.00 47.58 C
ATOM 8 O4' U A1235 4.458 87.365 62.840 1.00 48.21 O
ATOM 9 C3' U A1235 5.050 86.827 60.651 1.00 47.29 C
ATOM 10 O3' U A1235 4.642 86.828 59.304 1.00 47.26 O
ATOM 11 C2' U A1235 5.741 88.130 60.999 1.00 48.45 C
ATOM 12 O2' U A1235 5.020 89.223 60.471 1.00 49.25 O
ATOM 13 C1' U A1235 5.617 88.123 62.523 1.00 49.04 C
ATOM 14 N1 U A1235 6.783 87.513 63.186 1.00 50.12 N
ATOM 15 C2 U A1235 7.729 88.369 63.718 1.00 50.72 C
ATOM 16 O2 U A1235 7.642 89.583 63.636 1.00 50.53 O
ATOM 17 N3 U A1235 8.789 87.752 64.339 1.00 51.37 N
ATOM 18 C4 U A1235 9.004 86.395 64.470 1.00 51.41 C
ATOM 19 O4 U A1235 10.021 85.991 65.039 1.00 52.17 O
ATOM 20 C5 U A1235 7.992 85.577 63.884 1.00 51.32 C
ATOM 21 C6 U A1235 6.942 86.147 63.278 1.00 50.64 C
ATOM 22 P C A1236 5.514 86.044 58.218 1.00 48.65 P
ATOM 23 OP1 C A1236 4.736 86.009 56.958 1.00 48.36 O
ATOM 24 OP2 C A1236 5.952 84.779 58.832 1.00 49.21 O
ATOM 25 O5' C A1236 6.782 86.986 58.004 1.00 48.32 O
TER
ATOM 1 O3' A B1237 12.106 91.294 63.694 1.00 71.57 O
ATOM 2 P U B1238 11.759 90.660 65.130 1.00 76.69 P
ATOM 3 OP1 U B1238 11.917 89.178 64.995 1.00 74.70 O
ATOM 4 OP2 U B1238 10.468 91.231 65.646 1.00 75.51 O
ATOM 5 O5' U B1238 12.962 91.206 66.033 1.00 81.06 O
ATOM 6 C5' U B1238 12.775 92.246 67.045 1.00 87.32 C
ATOM 7 C4' U B1238 13.645 93.467 66.753 1.00 90.60 C
ATOM 8 O4' U B1238 14.860 93.051 66.077 1.00 92.96 O
ATOM 9 C3' U B1238 13.033 94.527 65.845 1.00 91.33 C
ATOM 10 O3' U B1238 12.290 95.486 66.600 1.00 89.86 O
ATOM 11 C2' U B1238 14.254 95.186 65.215 1.00 92.99 C
ATOM 12 O2' U B1238 14.830 96.154 66.074 1.00 93.71 O
ATOM 13 C1' U B1238 15.208 93.993 65.071 1.00 94.73 C
ATOM 14 N1 U B1238 15.214 93.300 63.762 1.00 96.98 N
ATOM 15 C2 U B1238 15.272 94.065 62.584 1.00 98.14 C
ATOM 16 O2 U B1238 15.308 95.295 62.570 1.00 98.68 O
ATOM 17 N3 U B1238 15.284 93.326 61.420 1.00 98.86 N
ATOM 18 C4 U B1238 15.246 91.947 61.299 1.00 98.23 C
ATOM 19 O4 U B1238 15.246 91.442 60.175 1.00 98.57 O
ATOM 20 C5 U B1238 15.188 91.234 62.541 1.00 97.58 C
ATOM 21 C6 U B1238 15.174 91.911 63.697 1.00 96.94 C
ATOM 22 P A B1239 10.704 95.620 66.384 1.00 90.01 P
ATOM 23 OP1 A B1239 10.188 96.534 67.429 1.00 90.00 O
ATOM 24 OP2 A B1239 10.150 94.247 66.277 1.00 91.04 O
ATOM 25 O5' A B1239 10.538 96.322 64.962 1.00 87.28 O
TER
ATOM 2 P U A1235 3.573 83.008 62.436 1.00 45.33 P
ATOM 3 OP1 U A1235 2.659 82.502 61.381 1.00 46.84 O
ATOM 4 OP2 U A1235 4.729 82.177 62.885 1.00 45.44 O
ATOM 5 O5' U A1235 4.085 84.464 62.045 1.00 46.08 O
ATOM 6 C5' U A1235 3.147 85.545 61.856 1.00 46.55 C
ATOM 7 C4' U A1235 3.876 86.849 61.614 1.00 47.58 C
ATOM 8 O4' U A1235 4.458 87.365 62.840 1.00 48.21 O
ATOM 9 C3' U A1235 5.050 86.827 60.651 1.00 47.29 C
ATOM 10 O3' U A1235 4.642 86.828 59.304 1.00 47.26 O
ATOM 11 C2' U A1235 5.741 88.130 60.999 1.00 48.45 C
ATOM 12 O2' U A1235 5.020 89.223 60.471 1.00 49.25 O
ATOM 13 C1' U A1235 5.617 88.123 62.523 1.00 49.04 C
ATOM 14 N1 U A1235 6.783 87.513 63.186 1.00 50.12 N
ATOM 15 C2 U A1235 7.729 88.369 63.718 1.00 50.72 C
ATOM 16 O2 U A1235 7.642 89.583 63.636 1.00 50.53 O
ATOM 17 N3 U A1235 8.789 87.752 64.339 1.00 51.37 N
ATOM 18 C4 U A1235 9.004 86.395 64.470 1.00 51.41 C
ATOM 19 O4 U A1235 10.021 85.991 65.039 1.00 52.17 O
ATOM 20 C5 U A1235 7.992 85.577 63.884 1.00 51.32 C
ATOM 21 C6 U A1235 6.942 86.147 63.278 1.00 50.64 C
ATOM 22 P C A1236 5.514 86.044 58.218 1.00 48.65 P
ATOM 23 OP1 C A1236 4.736 86.009 56.958 1.00 48.36 O
ATOM 24 OP2 C A1236 5.952 84.779 58.832 1.00 49.21 O
ATOM 25 O5' C A1236 6.782 86.986 58.004 1.00 48.32 O
TER
ATOM 1 O3' A B1237 12.106 91.294 63.694 1.00 71.57 O
ATOM 2 P U B1238 11.759 90.660 65.130 1.00 76.69 P
ATOM 3 OP1 U B1238 11.917 89.178 64.995 1.00 74.70 O
ATOM 4 OP2 U B1238 10.468 91.231 65.646 1.00 75.51 O
ATOM 5 O5' U B1238 12.962 91.206 66.033 1.00 81.06 O
ATOM 6 C5' U B1238 12.775 92.246 67.045 1.00 87.32 C
ATOM 7 C4' U B1238 13.645 93.467 66.753 1.00 90.60 C
ATOM 8 O4' U B1238 14.860 93.051 66.077 1.00 92.96 O
ATOM 9 C3' U B1238 13.033 94.527 65.845 1.00 91.33 C
ATOM 10 O3' U B1238 12.290 95.486 66.600 1.00 89.86 O
ATOM 11 C2' U B1238 14.254 95.186 65.215 1.00 92.99 C
ATOM 12 O2' U B1238 14.830 96.154 66.074 1.00 93.71 O
ATOM 13 C1' U B1238 15.208 93.993 65.071 1.00 94.73 C
ATOM 14 N1 U B1238 15.214 93.300 63.762 1.00 96.98 N
ATOM 15 C2 U B1238 15.272 94.065 62.584 1.00 98.14 C
ATOM 16 O2 U B1238 15.308 95.295 62.570 1.00 98.68 O
ATOM 17 N3 U B1238 15.284 93.326 61.420 1.00 98.86 N
ATOM 18 C4 U B1238 15.246 91.947 61.299 1.00 98.23 C
ATOM 19 O4 U B1238 15.246 91.442 60.175 1.00 98.57 O
ATOM 20 C5 U B1238 15.188 91.234 62.541 1.00 97.58 C
ATOM 21 C6 U B1238 15.174 91.911 63.697 1.00 96.94 C
ATOM 22 P A B1239 10.704 95.620 66.384 1.00 90.01 P
ATOM 23 OP1 A B1239 10.188 96.534 67.429 1.00 90.00 O
ATOM 24 OP2 A B1239 10.150 94.247 66.277 1.00 91.04 O
ATOM 25 O5' A B1239 10.538 96.322 64.962 1.00 87.28 O
TER
Atoms:
C4: (9.004,86.395,64.470)
N3: (8.789,87.752,64.339)
OP1: (2.659,82.502,61.381)
OP2: (4.729,82.177,62.885)
C2: (7.729,88.369,63.718)
C1': (5.617,88.123,62.523)
C3': (5.050,86.827,60.651)
O5': (4.085,84.464,62.045)
O4': (4.458,87.365,62.840)
C5': (3.147,85.545,61.856)
P: (3.573,83.008,62.436)
C4': (3.876,86.849,61.614)
C2': (5.741,88.130,60.999)
O2': (5.020,89.223,60.471)
N1: (6.783,87.513,63.186)
O4: (10.021,85.991,65.039)
O2: (7.642,89.583,63.636)
C6: (6.942,86.147,63.278)
C5: (7.992,85.577,63.884)
O3': (4.642,86.828,59.304)
N3: (8.789,87.752,64.339)
OP1: (2.659,82.502,61.381)
OP2: (4.729,82.177,62.885)
C2: (7.729,88.369,63.718)
C1': (5.617,88.123,62.523)
C3': (5.050,86.827,60.651)
O5': (4.085,84.464,62.045)
O4': (4.458,87.365,62.840)
C5': (3.147,85.545,61.856)
P: (3.573,83.008,62.436)
C4': (3.876,86.849,61.614)
C2': (5.741,88.130,60.999)
O2': (5.020,89.223,60.471)
N1: (6.783,87.513,63.186)
O4: (10.021,85.991,65.039)
O2: (7.642,89.583,63.636)
C6: (6.942,86.147,63.278)
C5: (7.992,85.577,63.884)
O3': (4.642,86.828,59.304)
C4: (15.246,91.947,61.299)
N3: (15.284,93.326,61.420)
OP1: (11.917,89.178,64.995)
OP2: (10.468,91.231,65.646)
C2: (15.272,94.065,62.584)
C1': (15.208,93.993,65.071)
C3': (13.033,94.527,65.845)
O5': (12.962,91.206,66.033)
O4': (14.860,93.051,66.077)
C5': (12.775,92.246,67.045)
P: (11.759,90.660,65.130)
C4': (13.645,93.467,66.753)
C2': (14.254,95.186,65.215)
O2': (14.830,96.154,66.074)
N1: (15.214,93.300,63.762)
O4: (15.246,91.442,60.175)
O2: (15.308,95.295,62.570)
C6: (15.174,91.911,63.697)
C5: (15.188,91.234,62.541)
O3': (12.290,95.486,66.600)
N3: (15.284,93.326,61.420)
OP1: (11.917,89.178,64.995)
OP2: (10.468,91.231,65.646)
C2: (15.272,94.065,62.584)
C1': (15.208,93.993,65.071)
C3': (13.033,94.527,65.845)
O5': (12.962,91.206,66.033)
O4': (14.860,93.051,66.077)
C5': (12.775,92.246,67.045)
P: (11.759,90.660,65.130)
C4': (13.645,93.467,66.753)
C2': (14.254,95.186,65.215)
O2': (14.830,96.154,66.074)
N1: (15.214,93.300,63.762)
O4: (15.246,91.442,60.175)
O2: (15.308,95.295,62.570)
C6: (15.174,91.911,63.697)
C5: (15.188,91.234,62.541)
O3': (12.290,95.486,66.600)
Image (generated by PyMOL):