Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A50:A116
Extra
PDB:
ATOM 1 O3' U A 49 -27.687 -56.904 66.588 1.00 17.73 O
ATOM 2 P G A 50 -27.215 -57.068 65.064 1.00 0.01 P
ATOM 3 OP1 G A 50 -27.302 -58.523 64.722 1.00 0.01 O
ATOM 4 OP2 G A 50 -25.913 -56.388 64.936 1.00 0.01 O
ATOM 5 O5' G A 50 -28.310 -56.244 64.265 1.00 0.01 O
ATOM 6 C5' G A 50 -29.587 -56.787 63.978 1.00 0.01 C
ATOM 7 C4' G A 50 -30.155 -56.162 62.743 1.00 0.01 C
ATOM 8 O4' G A 50 -30.163 -54.717 62.934 1.00 0.01 O
ATOM 9 C3' G A 50 -29.348 -56.441 61.479 1.00 0.01 C
ATOM 10 O3' G A 50 -30.214 -56.721 60.355 1.00 0.01 O
ATOM 11 C2' G A 50 -28.535 -55.153 61.277 1.00 0.01 C
ATOM 12 O2' G A 50 -28.268 -54.826 59.940 1.00 0.01 O
ATOM 13 C1' G A 50 -29.389 -54.081 61.944 1.00 0.01 C
ATOM 14 N9 G A 50 -28.597 -53.024 62.586 1.00 0.01 N
ATOM 15 C8 G A 50 -27.565 -53.145 63.479 1.00 0.01 C
ATOM 16 N7 G A 50 -27.035 -52.012 63.849 1.00 0.01 N
ATOM 17 C5 G A 50 -27.741 -51.081 63.143 1.00 0.01 C
ATOM 18 C6 G A 50 -27.647 -49.678 63.098 1.00 0.01 C
ATOM 19 O6 G A 50 -26.903 -48.914 63.690 1.00 0.01 O
ATOM 20 N1 G A 50 -28.552 -49.095 62.247 1.00 0.01 N
ATOM 21 C2 G A 50 -29.464 -49.783 61.510 1.00 0.01 C
ATOM 22 N2 G A 50 -30.267 -49.052 60.730 1.00 0.01 N
ATOM 23 N3 G A 50 -29.565 -51.099 61.530 1.00 0.01 N
ATOM 24 C4 G A 50 -28.686 -51.681 62.367 1.00 0.01 C
ATOM 25 P A A 51 -30.179 -58.190 59.638 1.00 5.84 P
ATOM 26 OP1 A A 51 -29.295 -59.062 60.442 1.00 5.84 O
ATOM 27 OP2 A A 51 -29.854 -57.993 58.223 1.00 5.84 O
ATOM 28 O5' A A 51 -31.666 -58.691 59.766 1.00 5.84 O
TER
ATOM 1 O3' C B 115 -28.321 -50.557 49.672 1.00 0.01 O
ATOM 2 P G B 116 -29.043 -49.549 50.700 1.00 0.01 P
ATOM 3 OP1 G B 116 -29.404 -48.352 49.922 1.00 0.01 O
ATOM 4 OP2 G B 116 -28.163 -49.392 51.868 1.00 0.01 O
ATOM 5 O5' G B 116 -30.351 -50.342 51.133 1.00 0.01 O
ATOM 6 C5' G B 116 -31.326 -50.707 50.185 1.00 0.01 C
ATOM 7 C4' G B 116 -32.308 -51.672 50.765 1.00 0.01 C
ATOM 8 O4' G B 116 -31.641 -52.903 51.083 1.00 0.01 O
ATOM 9 C3' G B 116 -32.944 -51.253 52.065 1.00 0.01 C
ATOM 10 O3' G B 116 -34.041 -50.406 51.884 1.00 0.01 O
ATOM 11 C2' G B 116 -33.323 -52.571 52.692 1.00 0.01 C
ATOM 12 O2' G B 116 -34.525 -53.068 52.139 1.00 0.01 O
ATOM 13 C1' G B 116 -32.177 -53.446 52.256 1.00 0.01 C
ATOM 14 N9 G B 116 -31.132 -53.466 53.267 1.00 0.02 N
ATOM 15 C8 G B 116 -30.147 -52.557 53.486 1.00 0.02 C
ATOM 16 N7 G B 116 -29.387 -52.891 54.506 1.00 0.02 N
ATOM 17 C5 G B 116 -29.925 -54.093 54.975 1.00 0.02 C
ATOM 18 C6 G B 116 -29.560 -54.967 56.034 1.00 0.02 C
ATOM 19 O6 G B 116 -28.647 -54.881 56.844 1.00 0.02 O
ATOM 20 N1 G B 116 -30.384 -56.051 56.134 1.00 0.02 N
ATOM 21 C2 G B 116 -31.432 -56.284 55.328 1.00 0.02 C
ATOM 22 N2 G B 116 -32.114 -57.383 55.585 1.00 0.02 N
ATOM 23 N3 G B 116 -31.797 -55.526 54.334 1.00 0.02 N
ATOM 24 C4 G B 116 -31.009 -54.444 54.216 1.00 0.02 C
ATOM 25 P A B 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 26 OP1 A B 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 27 OP2 A B 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 28 O5' A B 117 -34.396 -49.071 53.948 1.00 0.01 O
TER
ATOM 2 P G A 50 -27.215 -57.068 65.064 1.00 0.01 P
ATOM 3 OP1 G A 50 -27.302 -58.523 64.722 1.00 0.01 O
ATOM 4 OP2 G A 50 -25.913 -56.388 64.936 1.00 0.01 O
ATOM 5 O5' G A 50 -28.310 -56.244 64.265 1.00 0.01 O
ATOM 6 C5' G A 50 -29.587 -56.787 63.978 1.00 0.01 C
ATOM 7 C4' G A 50 -30.155 -56.162 62.743 1.00 0.01 C
ATOM 8 O4' G A 50 -30.163 -54.717 62.934 1.00 0.01 O
ATOM 9 C3' G A 50 -29.348 -56.441 61.479 1.00 0.01 C
ATOM 10 O3' G A 50 -30.214 -56.721 60.355 1.00 0.01 O
ATOM 11 C2' G A 50 -28.535 -55.153 61.277 1.00 0.01 C
ATOM 12 O2' G A 50 -28.268 -54.826 59.940 1.00 0.01 O
ATOM 13 C1' G A 50 -29.389 -54.081 61.944 1.00 0.01 C
ATOM 14 N9 G A 50 -28.597 -53.024 62.586 1.00 0.01 N
ATOM 15 C8 G A 50 -27.565 -53.145 63.479 1.00 0.01 C
ATOM 16 N7 G A 50 -27.035 -52.012 63.849 1.00 0.01 N
ATOM 17 C5 G A 50 -27.741 -51.081 63.143 1.00 0.01 C
ATOM 18 C6 G A 50 -27.647 -49.678 63.098 1.00 0.01 C
ATOM 19 O6 G A 50 -26.903 -48.914 63.690 1.00 0.01 O
ATOM 20 N1 G A 50 -28.552 -49.095 62.247 1.00 0.01 N
ATOM 21 C2 G A 50 -29.464 -49.783 61.510 1.00 0.01 C
ATOM 22 N2 G A 50 -30.267 -49.052 60.730 1.00 0.01 N
ATOM 23 N3 G A 50 -29.565 -51.099 61.530 1.00 0.01 N
ATOM 24 C4 G A 50 -28.686 -51.681 62.367 1.00 0.01 C
ATOM 25 P A A 51 -30.179 -58.190 59.638 1.00 5.84 P
ATOM 26 OP1 A A 51 -29.295 -59.062 60.442 1.00 5.84 O
ATOM 27 OP2 A A 51 -29.854 -57.993 58.223 1.00 5.84 O
ATOM 28 O5' A A 51 -31.666 -58.691 59.766 1.00 5.84 O
TER
ATOM 1 O3' C B 115 -28.321 -50.557 49.672 1.00 0.01 O
ATOM 2 P G B 116 -29.043 -49.549 50.700 1.00 0.01 P
ATOM 3 OP1 G B 116 -29.404 -48.352 49.922 1.00 0.01 O
ATOM 4 OP2 G B 116 -28.163 -49.392 51.868 1.00 0.01 O
ATOM 5 O5' G B 116 -30.351 -50.342 51.133 1.00 0.01 O
ATOM 6 C5' G B 116 -31.326 -50.707 50.185 1.00 0.01 C
ATOM 7 C4' G B 116 -32.308 -51.672 50.765 1.00 0.01 C
ATOM 8 O4' G B 116 -31.641 -52.903 51.083 1.00 0.01 O
ATOM 9 C3' G B 116 -32.944 -51.253 52.065 1.00 0.01 C
ATOM 10 O3' G B 116 -34.041 -50.406 51.884 1.00 0.01 O
ATOM 11 C2' G B 116 -33.323 -52.571 52.692 1.00 0.01 C
ATOM 12 O2' G B 116 -34.525 -53.068 52.139 1.00 0.01 O
ATOM 13 C1' G B 116 -32.177 -53.446 52.256 1.00 0.01 C
ATOM 14 N9 G B 116 -31.132 -53.466 53.267 1.00 0.02 N
ATOM 15 C8 G B 116 -30.147 -52.557 53.486 1.00 0.02 C
ATOM 16 N7 G B 116 -29.387 -52.891 54.506 1.00 0.02 N
ATOM 17 C5 G B 116 -29.925 -54.093 54.975 1.00 0.02 C
ATOM 18 C6 G B 116 -29.560 -54.967 56.034 1.00 0.02 C
ATOM 19 O6 G B 116 -28.647 -54.881 56.844 1.00 0.02 O
ATOM 20 N1 G B 116 -30.384 -56.051 56.134 1.00 0.02 N
ATOM 21 C2 G B 116 -31.432 -56.284 55.328 1.00 0.02 C
ATOM 22 N2 G B 116 -32.114 -57.383 55.585 1.00 0.02 N
ATOM 23 N3 G B 116 -31.797 -55.526 54.334 1.00 0.02 N
ATOM 24 C4 G B 116 -31.009 -54.444 54.216 1.00 0.02 C
ATOM 25 P A B 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 26 OP1 A B 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 27 OP2 A B 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 28 O5' A B 117 -34.396 -49.071 53.948 1.00 0.01 O
TER
Atoms:
OP1: (-27.302,-58.523,64.722)
OP2: (-25.913,-56.388,64.936)
C3': (-29.348,-56.441,61.479)
C1': (-29.389,-54.081,61.944)
C5': (-29.587,-56.787,63.978)
O6: (-26.903,-48.914,63.690)
O4': (-30.163,-54.717,62.934)
C8: (-27.565,-53.145,63.479)
C2: (-29.464,-49.783,61.510)
C6: (-27.647,-49.678,63.098)
C5: (-27.741,-51.081,63.143)
C4: (-28.686,-51.681,62.367)
P: (-27.215,-57.068,65.064)
C4': (-30.155,-56.162,62.743)
C2': (-28.535,-55.153,61.277)
O2': (-28.268,-54.826,59.940)
N1: (-28.552,-49.095,62.247)
N2: (-30.267,-49.052,60.730)
N3: (-29.565,-51.099,61.530)
N7: (-27.035,-52.012,63.849)
N9: (-28.597,-53.024,62.586)
O5': (-28.310,-56.244,64.265)
O3': (-30.214,-56.721,60.355)
OP2: (-25.913,-56.388,64.936)
C3': (-29.348,-56.441,61.479)
C1': (-29.389,-54.081,61.944)
C5': (-29.587,-56.787,63.978)
O6: (-26.903,-48.914,63.690)
O4': (-30.163,-54.717,62.934)
C8: (-27.565,-53.145,63.479)
C2: (-29.464,-49.783,61.510)
C6: (-27.647,-49.678,63.098)
C5: (-27.741,-51.081,63.143)
C4: (-28.686,-51.681,62.367)
P: (-27.215,-57.068,65.064)
C4': (-30.155,-56.162,62.743)
C2': (-28.535,-55.153,61.277)
O2': (-28.268,-54.826,59.940)
N1: (-28.552,-49.095,62.247)
N2: (-30.267,-49.052,60.730)
N3: (-29.565,-51.099,61.530)
N7: (-27.035,-52.012,63.849)
N9: (-28.597,-53.024,62.586)
O5': (-28.310,-56.244,64.265)
O3': (-30.214,-56.721,60.355)
OP1: (-29.404,-48.352,49.922)
OP2: (-28.163,-49.392,51.868)
C3': (-32.944,-51.253,52.065)
C1': (-32.177,-53.446,52.256)
C5': (-31.326,-50.707,50.185)
O6: (-28.647,-54.881,56.844)
O4': (-31.641,-52.903,51.083)
C8: (-30.147,-52.557,53.486)
C2: (-31.432,-56.284,55.328)
C6: (-29.560,-54.967,56.034)
C5: (-29.925,-54.093,54.975)
C4: (-31.009,-54.444,54.216)
P: (-29.043,-49.549,50.700)
C4': (-32.308,-51.672,50.765)
C2': (-33.323,-52.571,52.692)
O2': (-34.525,-53.068,52.139)
N1: (-30.384,-56.051,56.134)
N2: (-32.114,-57.383,55.585)
N3: (-31.797,-55.526,54.334)
N7: (-29.387,-52.891,54.506)
N9: (-31.132,-53.466,53.267)
O5': (-30.351,-50.342,51.133)
O3': (-34.041,-50.406,51.884)
OP2: (-28.163,-49.392,51.868)
C3': (-32.944,-51.253,52.065)
C1': (-32.177,-53.446,52.256)
C5': (-31.326,-50.707,50.185)
O6: (-28.647,-54.881,56.844)
O4': (-31.641,-52.903,51.083)
C8: (-30.147,-52.557,53.486)
C2: (-31.432,-56.284,55.328)
C6: (-29.560,-54.967,56.034)
C5: (-29.925,-54.093,54.975)
C4: (-31.009,-54.444,54.216)
P: (-29.043,-49.549,50.700)
C4': (-32.308,-51.672,50.765)
C2': (-33.323,-52.571,52.692)
O2': (-34.525,-53.068,52.139)
N1: (-30.384,-56.051,56.134)
N2: (-32.114,-57.383,55.585)
N3: (-31.797,-55.526,54.334)
N7: (-29.387,-52.891,54.506)
N9: (-31.132,-53.466,53.267)
O5': (-30.351,-50.342,51.133)
O3': (-34.041,-50.406,51.884)
Image (generated by PyMOL):