Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12170:12203
Extra
PDB:
ATOM 1 O3' C A2169 58.654 15.032 59.229 1.00 35.52 O
ATOM 2 P A A2170 58.436 16.613 59.196 1.00 38.23 P
ATOM 3 OP1 A A2170 59.761 17.243 58.997 1.00 38.41 O
ATOM 4 OP2 A A2170 57.655 16.959 60.388 1.00 38.22 O
ATOM 5 O5' A A2170 57.584 16.779 57.871 1.00 38.24 O
ATOM 6 C5' A A2170 56.600 17.761 57.704 1.00 38.35 C
ATOM 7 C4' A A2170 55.782 17.423 56.505 1.00 38.30 C
ATOM 8 O4' A A2170 55.023 16.208 56.757 1.00 38.07 O
ATOM 9 C3' A A2170 54.770 18.441 56.093 1.00 38.44 C
ATOM 10 O3' A A2170 55.365 19.422 55.270 1.00 38.66 O
ATOM 11 C2' A A2170 53.708 17.588 55.385 1.00 38.29 C
ATOM 12 O2' A A2170 54.060 17.347 54.048 1.00 38.33 O
ATOM 13 C1' A A2170 53.787 16.262 56.132 1.00 38.06 C
ATOM 14 N9 A A2170 52.759 16.164 57.151 1.00 37.97 N
ATOM 15 C8 A A2170 52.810 16.305 58.493 1.00 37.95 C
ATOM 16 N7 A A2170 51.641 16.200 59.095 1.00 37.88 N
ATOM 17 C5 A A2170 50.753 16.001 58.043 1.00 37.86 C
ATOM 18 C6 A A2170 49.366 15.799 57.915 1.00 37.81 C
ATOM 19 N6 A A2170 48.458 15.769 58.879 1.00 37.76 N
ATOM 20 N1 A A2170 48.868 15.592 56.697 1.00 37.82 N
ATOM 21 C2 A A2170 49.658 15.627 55.650 1.00 37.88 C
ATOM 22 N3 A A2170 50.950 15.797 55.612 1.00 37.93 N
ATOM 23 C4 A A2170 51.450 15.979 56.848 1.00 37.92 C
ATOM 24 P G A2171 54.842 20.942 55.239 1.00 40.12 P
ATOM 25 OP1 G A2171 55.889 21.734 54.507 1.00 40.34 O
ATOM 26 OP2 G A2171 54.477 21.340 56.603 1.00 40.12 O
ATOM 27 O5' G A2171 53.545 20.828 54.345 1.00 40.10 O
TER
ATOM 1 O3' G B2202 37.909 15.663 54.577 1.00 32.25 O
ATOM 2 P G B2203 38.254 14.774 55.872 1.00 39.86 P
ATOM 3 OP1 G B2203 38.318 13.397 55.416 1.00 39.69 O
ATOM 4 OP2 G B2203 37.288 15.133 56.935 1.00 39.89 O
ATOM 5 O5' G B2203 39.705 15.268 56.285 1.00 39.86 O
ATOM 6 C5' G B2203 40.844 14.788 55.606 1.00 39.80 C
ATOM 7 C4' G B2203 42.108 15.379 56.150 1.00 39.83 C
ATOM 8 O4' G B2203 41.957 16.776 56.367 1.00 40.04 O
ATOM 9 C3' G B2203 42.559 14.870 57.478 1.00 39.69 C
ATOM 10 O3' G B2203 43.122 13.590 57.341 1.00 39.51 O
ATOM 11 C2' G B2203 43.569 15.963 57.893 1.00 39.82 C
ATOM 12 O2' G B2203 44.856 15.780 57.277 1.00 39.81 O
ATOM 13 C1' G B2203 42.947 17.212 57.278 1.00 40.05 C
ATOM 14 N9 G B2203 42.337 18.096 58.296 1.00 40.16 N
ATOM 15 C8 G B2203 41.018 18.115 58.600 1.00 40.18 C
ATOM 16 N7 G B2203 40.720 18.972 59.516 1.00 40.30 N
ATOM 17 C5 G B2203 41.914 19.554 59.879 1.00 40.37 C
ATOM 18 C6 G B2203 42.171 20.569 60.854 1.00 40.52 C
ATOM 19 O6 G B2203 41.394 21.157 61.622 1.00 40.63 O
ATOM 20 N1 G B2203 43.520 20.882 60.879 1.00 40.56 N
ATOM 21 C2 G B2203 44.455 20.302 60.069 1.00 40.47 C
ATOM 22 N2 G B2203 45.691 20.750 60.218 1.00 40.54 N
ATOM 23 N3 G B2203 44.201 19.358 59.165 1.00 40.32 N
ATOM 24 C4 G B2203 42.913 19.025 59.115 1.00 40.28 C
ATOM 25 P A B2204 42.828 12.385 58.347 1.00 65.04 P
ATOM 26 OP1 A B2204 43.178 12.843 59.680 1.00 65.05 O
ATOM 27 OP2 A B2204 43.518 11.222 57.791 1.00 64.91 O
ATOM 28 O5' A B2204 41.291 12.141 58.227 1.00 65.03 O
TER
ATOM 2 P A A2170 58.436 16.613 59.196 1.00 38.23 P
ATOM 3 OP1 A A2170 59.761 17.243 58.997 1.00 38.41 O
ATOM 4 OP2 A A2170 57.655 16.959 60.388 1.00 38.22 O
ATOM 5 O5' A A2170 57.584 16.779 57.871 1.00 38.24 O
ATOM 6 C5' A A2170 56.600 17.761 57.704 1.00 38.35 C
ATOM 7 C4' A A2170 55.782 17.423 56.505 1.00 38.30 C
ATOM 8 O4' A A2170 55.023 16.208 56.757 1.00 38.07 O
ATOM 9 C3' A A2170 54.770 18.441 56.093 1.00 38.44 C
ATOM 10 O3' A A2170 55.365 19.422 55.270 1.00 38.66 O
ATOM 11 C2' A A2170 53.708 17.588 55.385 1.00 38.29 C
ATOM 12 O2' A A2170 54.060 17.347 54.048 1.00 38.33 O
ATOM 13 C1' A A2170 53.787 16.262 56.132 1.00 38.06 C
ATOM 14 N9 A A2170 52.759 16.164 57.151 1.00 37.97 N
ATOM 15 C8 A A2170 52.810 16.305 58.493 1.00 37.95 C
ATOM 16 N7 A A2170 51.641 16.200 59.095 1.00 37.88 N
ATOM 17 C5 A A2170 50.753 16.001 58.043 1.00 37.86 C
ATOM 18 C6 A A2170 49.366 15.799 57.915 1.00 37.81 C
ATOM 19 N6 A A2170 48.458 15.769 58.879 1.00 37.76 N
ATOM 20 N1 A A2170 48.868 15.592 56.697 1.00 37.82 N
ATOM 21 C2 A A2170 49.658 15.627 55.650 1.00 37.88 C
ATOM 22 N3 A A2170 50.950 15.797 55.612 1.00 37.93 N
ATOM 23 C4 A A2170 51.450 15.979 56.848 1.00 37.92 C
ATOM 24 P G A2171 54.842 20.942 55.239 1.00 40.12 P
ATOM 25 OP1 G A2171 55.889 21.734 54.507 1.00 40.34 O
ATOM 26 OP2 G A2171 54.477 21.340 56.603 1.00 40.12 O
ATOM 27 O5' G A2171 53.545 20.828 54.345 1.00 40.10 O
TER
ATOM 1 O3' G B2202 37.909 15.663 54.577 1.00 32.25 O
ATOM 2 P G B2203 38.254 14.774 55.872 1.00 39.86 P
ATOM 3 OP1 G B2203 38.318 13.397 55.416 1.00 39.69 O
ATOM 4 OP2 G B2203 37.288 15.133 56.935 1.00 39.89 O
ATOM 5 O5' G B2203 39.705 15.268 56.285 1.00 39.86 O
ATOM 6 C5' G B2203 40.844 14.788 55.606 1.00 39.80 C
ATOM 7 C4' G B2203 42.108 15.379 56.150 1.00 39.83 C
ATOM 8 O4' G B2203 41.957 16.776 56.367 1.00 40.04 O
ATOM 9 C3' G B2203 42.559 14.870 57.478 1.00 39.69 C
ATOM 10 O3' G B2203 43.122 13.590 57.341 1.00 39.51 O
ATOM 11 C2' G B2203 43.569 15.963 57.893 1.00 39.82 C
ATOM 12 O2' G B2203 44.856 15.780 57.277 1.00 39.81 O
ATOM 13 C1' G B2203 42.947 17.212 57.278 1.00 40.05 C
ATOM 14 N9 G B2203 42.337 18.096 58.296 1.00 40.16 N
ATOM 15 C8 G B2203 41.018 18.115 58.600 1.00 40.18 C
ATOM 16 N7 G B2203 40.720 18.972 59.516 1.00 40.30 N
ATOM 17 C5 G B2203 41.914 19.554 59.879 1.00 40.37 C
ATOM 18 C6 G B2203 42.171 20.569 60.854 1.00 40.52 C
ATOM 19 O6 G B2203 41.394 21.157 61.622 1.00 40.63 O
ATOM 20 N1 G B2203 43.520 20.882 60.879 1.00 40.56 N
ATOM 21 C2 G B2203 44.455 20.302 60.069 1.00 40.47 C
ATOM 22 N2 G B2203 45.691 20.750 60.218 1.00 40.54 N
ATOM 23 N3 G B2203 44.201 19.358 59.165 1.00 40.32 N
ATOM 24 C4 G B2203 42.913 19.025 59.115 1.00 40.28 C
ATOM 25 P A B2204 42.828 12.385 58.347 1.00 65.04 P
ATOM 26 OP1 A B2204 43.178 12.843 59.680 1.00 65.05 O
ATOM 27 OP2 A B2204 43.518 11.222 57.791 1.00 64.91 O
ATOM 28 O5' A B2204 41.291 12.141 58.227 1.00 65.03 O
TER
Atoms:
OP1: (59.761,17.243,58.997)
OP2: (57.655,16.959,60.388)
C3': (54.770,18.441,56.093)
C1': (53.787,16.262,56.132)
C5': (56.600,17.761,57.704)
O4': (55.023,16.208,56.757)
C8: (52.810,16.305,58.493)
O2': (54.060,17.347,54.048)
C6: (49.366,15.799,57.915)
C5: (50.753,16.001,58.043)
C4: (51.450,15.979,56.848)
P: (58.436,16.613,59.196)
C4': (55.782,17.423,56.505)
C2': (53.708,17.588,55.385)
C2: (49.658,15.627,55.650)
N1: (48.868,15.592,56.697)
N3: (50.950,15.797,55.612)
N6: (48.458,15.769,58.879)
N7: (51.641,16.200,59.095)
N9: (52.759,16.164,57.151)
O5': (57.584,16.779,57.871)
O3': (55.365,19.422,55.270)
OP2: (57.655,16.959,60.388)
C3': (54.770,18.441,56.093)
C1': (53.787,16.262,56.132)
C5': (56.600,17.761,57.704)
O4': (55.023,16.208,56.757)
C8: (52.810,16.305,58.493)
O2': (54.060,17.347,54.048)
C6: (49.366,15.799,57.915)
C5: (50.753,16.001,58.043)
C4: (51.450,15.979,56.848)
P: (58.436,16.613,59.196)
C4': (55.782,17.423,56.505)
C2': (53.708,17.588,55.385)
C2: (49.658,15.627,55.650)
N1: (48.868,15.592,56.697)
N3: (50.950,15.797,55.612)
N6: (48.458,15.769,58.879)
N7: (51.641,16.200,59.095)
N9: (52.759,16.164,57.151)
O5': (57.584,16.779,57.871)
O3': (55.365,19.422,55.270)
OP1: (38.318,13.397,55.416)
OP2: (37.288,15.133,56.935)
C3': (42.559,14.870,57.478)
C1': (42.947,17.212,57.278)
C5': (40.844,14.788,55.606)
O6: (41.394,21.157,61.622)
O4': (41.957,16.776,56.367)
C8: (41.018,18.115,58.600)
C2: (44.455,20.302,60.069)
C6: (42.171,20.569,60.854)
C5: (41.914,19.554,59.879)
C4: (42.913,19.025,59.115)
P: (38.254,14.774,55.872)
C4': (42.108,15.379,56.150)
C2': (43.569,15.963,57.893)
O2': (44.856,15.780,57.277)
N1: (43.520,20.882,60.879)
N2: (45.691,20.750,60.218)
N3: (44.201,19.358,59.165)
N7: (40.720,18.972,59.516)
N9: (42.337,18.096,58.296)
O5': (39.705,15.268,56.285)
O3': (43.122,13.590,57.341)
OP2: (37.288,15.133,56.935)
C3': (42.559,14.870,57.478)
C1': (42.947,17.212,57.278)
C5': (40.844,14.788,55.606)
O6: (41.394,21.157,61.622)
O4': (41.957,16.776,56.367)
C8: (41.018,18.115,58.600)
C2: (44.455,20.302,60.069)
C6: (42.171,20.569,60.854)
C5: (41.914,19.554,59.879)
C4: (42.913,19.025,59.115)
P: (38.254,14.774,55.872)
C4': (42.108,15.379,56.150)
C2': (43.569,15.963,57.893)
O2': (44.856,15.780,57.277)
N1: (43.520,20.882,60.879)
N2: (45.691,20.750,60.218)
N3: (44.201,19.358,59.165)
N7: (40.720,18.972,59.516)
N9: (42.337,18.096,58.296)
O5': (39.705,15.268,56.285)
O3': (43.122,13.590,57.341)
Image (generated by PyMOL):