ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:52174:52207

Extra

PDB:
ATOM 1 O3' C A2173 116.871 16.852 231.941 1.00 35.60 O
ATOM 2 P A A2174 117.104 18.430 231.764 1.00 36.29 P
ATOM 3 OP1 A A2174 115.814 19.021 231.416 1.00 36.56 O
ATOM 4 OP2 A A2174 118.207 18.608 230.838 1.00 36.24 O
ATOM 5 O5' A A2174 117.524 18.877 233.216 1.00 36.09 O
ATOM 6 C5' A A2174 118.510 19.872 233.465 1.00 35.96 C
ATOM 7 C4' A A2174 118.963 19.790 234.903 1.00 35.75 C
ATOM 8 O4' A A2174 119.789 18.610 235.076 1.00 35.57 O
ATOM 9 C3' A A2174 119.799 20.921 235.406 1.00 35.64 C
ATOM 10 O3' A A2174 119.010 21.952 235.911 1.00 35.77 O
ATOM 11 C2' A A2174 120.658 20.267 236.477 1.00 35.40 C
ATOM 12 O2' A A2174 119.913 20.143 237.656 1.00 35.40 O
ATOM 13 C1' A A2174 120.862 18.868 235.934 1.00 35.35 C
ATOM 14 N9 A A2174 122.127 18.698 235.177 1.00 35.24 N
ATOM 15 C8 A A2174 122.271 18.579 233.816 1.00 35.35 C
ATOM 16 N7 A A2174 123.495 18.404 233.366 1.00 35.23 N
ATOM 17 C5 A A2174 124.219 18.400 234.521 1.00 35.02 C
ATOM 18 C6 A A2174 125.585 18.238 234.758 1.00 34.83 C
ATOM 19 N6 A A2174 126.470 18.085 233.768 1.00 34.82 N
ATOM 20 N1 A A2174 126.029 18.237 236.035 1.00 34.66 N
ATOM 21 C2 A A2174 125.162 18.446 237.017 1.00 34.69 C
ATOM 22 N3 A A2174 123.867 18.596 236.910 1.00 34.86 N
ATOM 23 C4 A A2174 123.418 18.561 235.637 1.00 35.02 C
ATOM 24 P G A2175 119.506 23.467 235.799 1.00 38.39 P
ATOM 25 OP1 G A2175 118.343 24.318 236.024 1.00 38.60 O
ATOM 26 OP2 G A2175 120.248 23.615 234.531 1.00 38.40 O
ATOM 27 O5' G A2175 120.497 23.604 237.012 1.00 38.15 O
TER

ATOM 1 O3' G B2206 135.960 19.212 240.755 1.00 34.60 O
ATOM 2 P G B2207 135.932 18.257 239.484 1.00 39.30 P
ATOM 3 OP1 G B2207 135.911 16.881 240.006 1.00 39.22 O
ATOM 4 OP2 G B2207 137.032 18.656 238.604 1.00 39.30 O
ATOM 5 O5' G B2207 134.540 18.598 238.798 1.00 39.47 O
ATOM 6 C5' G B2207 133.386 17.831 239.081 1.00 39.51 C
ATOM 7 C4' G B2207 132.188 18.304 238.304 1.00 39.69 C
ATOM 8 O4' G B2207 132.281 19.735 238.060 1.00 39.76 O
ATOM 9 C3' G B2207 131.980 17.700 236.911 1.00 39.80 C
ATOM 10 O3' G B2207 131.373 16.412 236.952 1.00 39.81 O
ATOM 11 C2' G B2207 131.052 18.725 236.283 1.00 39.98 C
ATOM 12 O2' G B2207 129.729 18.510 236.756 1.00 40.05 O
ATOM 13 C1' G B2207 131.554 20.049 236.884 1.00 39.94 C
ATOM 14 N9 G B2207 132.408 20.818 235.930 1.00 39.98 N
ATOM 15 C8 G B2207 133.778 20.875 235.848 1.00 39.88 C
ATOM 16 N7 G B2207 134.211 21.653 234.883 1.00 39.97 N
ATOM 17 C5 G B2207 133.078 22.117 234.243 1.00 40.15 C
ATOM 18 C6 G B2207 132.937 22.975 233.111 1.00 40.33 C
ATOM 19 O6 G B2207 133.791 23.519 232.415 1.00 40.37 O
ATOM 20 N1 G B2207 131.631 23.233 232.792 1.00 40.49 N
ATOM 21 C2 G B2207 130.577 22.702 233.504 1.00 40.48 C
ATOM 22 N2 G B2207 129.322 23.057 233.062 1.00 40.67 N
ATOM 23 N3 G B2207 130.720 21.874 234.555 1.00 40.32 N
ATOM 24 C4 G B2207 131.977 21.626 234.888 1.00 40.16 C
ATOM 25 P A B2208 132.163 15.046 236.657 1.00 57.48 P
ATOM 26 OP1 A B2208 133.189 15.322 235.701 1.00 57.49 O
ATOM 27 OP2 A B2208 131.175 14.039 236.334 1.00 57.58 O
ATOM 28 O5' A B2208 132.786 14.695 238.056 1.00 57.30 O
TER

Atoms:
OP1: (115.814,19.021,231.416)
OP2: (118.207,18.608,230.838)
C3': (119.799,20.921,235.406)
C1': (120.862,18.868,235.934)
C5': (118.510,19.872,233.465)
O4': (119.789,18.610,235.076)
C8: (122.271,18.579,233.816)
O2': (119.913,20.143,237.656)
C6: (125.585,18.238,234.758)
C5: (124.219,18.400,234.521)
C4: (123.418,18.561,235.637)
P: (117.104,18.430,231.764)
C4': (118.963,19.790,234.903)
C2': (120.658,20.267,236.477)
C2: (125.162,18.446,237.017)
N1: (126.029,18.237,236.035)
N3: (123.867,18.596,236.910)
N6: (126.470,18.085,233.768)
N7: (123.495,18.404,233.366)
N9: (122.127,18.698,235.177)
O5': (117.524,18.877,233.216)
O3': (119.010,21.952,235.911)
OP1: (135.911,16.881,240.006)
OP2: (137.032,18.656,238.604)
C3': (131.980,17.700,236.911)
C1': (131.554,20.049,236.884)
C5': (133.386,17.831,239.081)
O6: (133.791,23.519,232.415)
O4': (132.281,19.735,238.060)
C8: (133.778,20.875,235.848)
C2: (130.577,22.702,233.504)
C6: (132.937,22.975,233.111)
C5: (133.078,22.117,234.243)
C4: (131.977,21.626,234.888)
P: (135.932,18.257,239.484)
C4': (132.188,18.304,238.304)
C2': (131.052,18.725,236.283)
O2': (129.729,18.510,236.756)
N1: (131.631,23.233,232.792)
N2: (129.322,23.057,233.062)
N3: (130.720,21.874,234.555)
N7: (134.211,21.653,234.883)
N9: (132.408,20.818,235.930)
O5': (134.540,18.598,238.798)
O3': (131.373,16.412,236.952)
Image (generated by PyMOL):
PyMOL image
show in jmol