Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:C43:C46
Extra
PDB:
ATOM 1 O3' G A 42 114.196 107.914 18.759 1.00 70.35 O
ATOM 2 P U A 43 115.633 107.297 18.371 1.00 71.54 P
ATOM 3 OP1 U A 43 116.637 108.011 19.196 1.00 70.94 O
ATOM 4 OP2 U A 43 115.755 107.318 16.886 1.00 70.55 O
ATOM 5 O5' U A 43 115.549 105.785 18.881 1.00 69.89 O
ATOM 6 C5' U A 43 115.600 105.495 20.273 1.00 67.85 C
ATOM 7 C4' U A 43 115.548 104.003 20.517 1.00 67.66 C
ATOM 8 O4' U A 43 114.244 103.468 20.174 1.00 67.36 O
ATOM 9 C3' U A 43 116.498 103.125 19.723 1.00 67.44 C
ATOM 10 O3' U A 43 117.816 103.185 20.264 1.00 68.32 O
ATOM 11 C2' U A 43 115.872 101.748 19.928 1.00 67.37 C
ATOM 12 O2' U A 43 116.228 101.162 21.170 1.00 67.57 O
ATOM 13 C1' U A 43 114.371 102.079 19.907 1.00 66.73 C
ATOM 14 N1 U A 43 113.758 101.775 18.604 1.00 65.44 N
ATOM 15 C2 U A 43 113.275 100.486 18.408 1.00 64.90 C
ATOM 16 O2 U A 43 113.269 99.645 19.288 1.00 65.50 O
ATOM 17 N3 U A 43 112.804 100.219 17.143 1.00 63.97 N
ATOM 18 C4 U A 43 112.764 101.091 16.074 1.00 64.04 C
ATOM 19 O4 U A 43 112.461 100.663 14.956 1.00 63.51 O
ATOM 20 C5 U A 43 113.234 102.418 16.369 1.00 65.02 C
ATOM 21 C6 U A 43 113.699 102.709 17.596 1.00 65.37 C
ATOM 22 P A A 44 119.094 103.194 19.278 1.00 68.50 P
ATOM 23 OP1 A A 44 120.294 103.465 20.107 1.00 68.00 O
ATOM 24 OP2 A A 44 118.817 104.048 18.091 1.00 67.61 O
ATOM 25 O5' A A 44 119.171 101.693 18.750 1.00 67.86 O
TER
ATOM 1 O3' A B 45 113.103 95.540 16.619 1.00 65.24 O
ATOM 2 P U B 46 111.723 96.337 16.802 1.00 65.60 P
ATOM 3 OP1 U B 46 110.612 95.402 16.506 1.00 65.70 O
ATOM 4 OP2 U B 46 111.839 97.617 16.047 1.00 64.58 O
ATOM 5 O5' U B 46 111.774 96.666 18.363 1.00 66.19 O
ATOM 6 C5' U B 46 110.618 96.966 19.129 1.00 66.37 C
ATOM 7 C4' U B 46 110.663 96.204 20.440 1.00 67.03 C
ATOM 8 O4' U B 46 111.988 96.287 21.046 1.00 66.65 O
ATOM 9 C3' U B 46 109.761 96.713 21.550 1.00 67.24 C
ATOM 10 O3' U B 46 108.412 96.337 21.353 1.00 68.91 O
ATOM 11 C2' U B 46 110.382 96.031 22.760 1.00 65.64 C
ATOM 12 O2' U B 46 110.096 94.646 22.801 1.00 65.70 O
ATOM 13 C1' U B 46 111.867 96.241 22.465 1.00 63.65 C
ATOM 14 N1 U B 46 112.297 97.534 23.012 1.00 60.58 N
ATOM 15 C2 U B 46 112.437 97.629 24.384 1.00 60.25 C
ATOM 16 O2 U B 46 112.298 96.673 25.127 1.00 61.35 O
ATOM 17 N3 U B 46 112.747 98.883 24.853 1.00 57.99 N
ATOM 18 C4 U B 46 112.936 100.025 24.097 1.00 58.28 C
ATOM 19 O4 U B 46 113.039 101.117 24.662 1.00 57.61 O
ATOM 20 C5 U B 46 112.826 99.825 22.682 1.00 58.24 C
ATOM 21 C6 U B 46 112.518 98.615 22.202 1.00 59.10 C
ATOM 22 P A B 47 107.268 97.452 21.443 1.00 70.04 P
ATOM 23 OP1 A B 47 106.001 96.734 21.741 1.00 70.89 O
ATOM 24 OP2 A B 47 107.359 98.320 20.242 1.00 70.31 O
ATOM 25 O5' A B 47 107.667 98.320 22.718 1.00 70.03 O
TER
ATOM 2 P U A 43 115.633 107.297 18.371 1.00 71.54 P
ATOM 3 OP1 U A 43 116.637 108.011 19.196 1.00 70.94 O
ATOM 4 OP2 U A 43 115.755 107.318 16.886 1.00 70.55 O
ATOM 5 O5' U A 43 115.549 105.785 18.881 1.00 69.89 O
ATOM 6 C5' U A 43 115.600 105.495 20.273 1.00 67.85 C
ATOM 7 C4' U A 43 115.548 104.003 20.517 1.00 67.66 C
ATOM 8 O4' U A 43 114.244 103.468 20.174 1.00 67.36 O
ATOM 9 C3' U A 43 116.498 103.125 19.723 1.00 67.44 C
ATOM 10 O3' U A 43 117.816 103.185 20.264 1.00 68.32 O
ATOM 11 C2' U A 43 115.872 101.748 19.928 1.00 67.37 C
ATOM 12 O2' U A 43 116.228 101.162 21.170 1.00 67.57 O
ATOM 13 C1' U A 43 114.371 102.079 19.907 1.00 66.73 C
ATOM 14 N1 U A 43 113.758 101.775 18.604 1.00 65.44 N
ATOM 15 C2 U A 43 113.275 100.486 18.408 1.00 64.90 C
ATOM 16 O2 U A 43 113.269 99.645 19.288 1.00 65.50 O
ATOM 17 N3 U A 43 112.804 100.219 17.143 1.00 63.97 N
ATOM 18 C4 U A 43 112.764 101.091 16.074 1.00 64.04 C
ATOM 19 O4 U A 43 112.461 100.663 14.956 1.00 63.51 O
ATOM 20 C5 U A 43 113.234 102.418 16.369 1.00 65.02 C
ATOM 21 C6 U A 43 113.699 102.709 17.596 1.00 65.37 C
ATOM 22 P A A 44 119.094 103.194 19.278 1.00 68.50 P
ATOM 23 OP1 A A 44 120.294 103.465 20.107 1.00 68.00 O
ATOM 24 OP2 A A 44 118.817 104.048 18.091 1.00 67.61 O
ATOM 25 O5' A A 44 119.171 101.693 18.750 1.00 67.86 O
TER
ATOM 1 O3' A B 45 113.103 95.540 16.619 1.00 65.24 O
ATOM 2 P U B 46 111.723 96.337 16.802 1.00 65.60 P
ATOM 3 OP1 U B 46 110.612 95.402 16.506 1.00 65.70 O
ATOM 4 OP2 U B 46 111.839 97.617 16.047 1.00 64.58 O
ATOM 5 O5' U B 46 111.774 96.666 18.363 1.00 66.19 O
ATOM 6 C5' U B 46 110.618 96.966 19.129 1.00 66.37 C
ATOM 7 C4' U B 46 110.663 96.204 20.440 1.00 67.03 C
ATOM 8 O4' U B 46 111.988 96.287 21.046 1.00 66.65 O
ATOM 9 C3' U B 46 109.761 96.713 21.550 1.00 67.24 C
ATOM 10 O3' U B 46 108.412 96.337 21.353 1.00 68.91 O
ATOM 11 C2' U B 46 110.382 96.031 22.760 1.00 65.64 C
ATOM 12 O2' U B 46 110.096 94.646 22.801 1.00 65.70 O
ATOM 13 C1' U B 46 111.867 96.241 22.465 1.00 63.65 C
ATOM 14 N1 U B 46 112.297 97.534 23.012 1.00 60.58 N
ATOM 15 C2 U B 46 112.437 97.629 24.384 1.00 60.25 C
ATOM 16 O2 U B 46 112.298 96.673 25.127 1.00 61.35 O
ATOM 17 N3 U B 46 112.747 98.883 24.853 1.00 57.99 N
ATOM 18 C4 U B 46 112.936 100.025 24.097 1.00 58.28 C
ATOM 19 O4 U B 46 113.039 101.117 24.662 1.00 57.61 O
ATOM 20 C5 U B 46 112.826 99.825 22.682 1.00 58.24 C
ATOM 21 C6 U B 46 112.518 98.615 22.202 1.00 59.10 C
ATOM 22 P A B 47 107.268 97.452 21.443 1.00 70.04 P
ATOM 23 OP1 A B 47 106.001 96.734 21.741 1.00 70.89 O
ATOM 24 OP2 A B 47 107.359 98.320 20.242 1.00 70.31 O
ATOM 25 O5' A B 47 107.667 98.320 22.718 1.00 70.03 O
TER
Atoms:
C4: (112.764,101.091,16.074)
N3: (112.804,100.219,17.143)
OP1: (116.637,108.011,19.196)
OP2: (115.755,107.318,16.886)
C2: (113.275,100.486,18.408)
C1': (114.371,102.079,19.907)
C3': (116.498,103.125,19.723)
O5': (115.549,105.785,18.881)
O4': (114.244,103.468,20.174)
C5': (115.600,105.495,20.273)
P: (115.633,107.297,18.371)
C4': (115.548,104.003,20.517)
C2': (115.872,101.748,19.928)
O2': (116.228,101.162,21.170)
N1: (113.758,101.775,18.604)
O4: (112.461,100.663,14.956)
O2: (113.269,99.645,19.288)
C6: (113.699,102.709,17.596)
C5: (113.234,102.418,16.369)
O3': (117.816,103.185,20.264)
N3: (112.804,100.219,17.143)
OP1: (116.637,108.011,19.196)
OP2: (115.755,107.318,16.886)
C2: (113.275,100.486,18.408)
C1': (114.371,102.079,19.907)
C3': (116.498,103.125,19.723)
O5': (115.549,105.785,18.881)
O4': (114.244,103.468,20.174)
C5': (115.600,105.495,20.273)
P: (115.633,107.297,18.371)
C4': (115.548,104.003,20.517)
C2': (115.872,101.748,19.928)
O2': (116.228,101.162,21.170)
N1: (113.758,101.775,18.604)
O4: (112.461,100.663,14.956)
O2: (113.269,99.645,19.288)
C6: (113.699,102.709,17.596)
C5: (113.234,102.418,16.369)
O3': (117.816,103.185,20.264)
C4: (112.936,100.025,24.097)
N3: (112.747,98.883,24.853)
OP1: (110.612,95.402,16.506)
OP2: (111.839,97.617,16.047)
C2: (112.437,97.629,24.384)
C1': (111.867,96.241,22.465)
C3': (109.761,96.713,21.550)
O5': (111.774,96.666,18.363)
O4': (111.988,96.287,21.046)
C5': (110.618,96.966,19.129)
P: (111.723,96.337,16.802)
C4': (110.663,96.204,20.440)
C2': (110.382,96.031,22.760)
O2': (110.096,94.646,22.801)
N1: (112.297,97.534,23.012)
O4: (113.039,101.117,24.662)
O2: (112.298,96.673,25.127)
C6: (112.518,98.615,22.202)
C5: (112.826,99.825,22.682)
O3': (108.412,96.337,21.353)
N3: (112.747,98.883,24.853)
OP1: (110.612,95.402,16.506)
OP2: (111.839,97.617,16.047)
C2: (112.437,97.629,24.384)
C1': (111.867,96.241,22.465)
C3': (109.761,96.713,21.550)
O5': (111.774,96.666,18.363)
O4': (111.988,96.287,21.046)
C5': (110.618,96.966,19.129)
P: (111.723,96.337,16.802)
C4': (110.663,96.204,20.440)
C2': (110.382,96.031,22.760)
O2': (110.096,94.646,22.801)
N1: (112.297,97.534,23.012)
O4: (113.039,101.117,24.662)
O2: (112.298,96.673,25.127)
C6: (112.518,98.615,22.202)
C5: (112.826,99.825,22.682)
O3': (108.412,96.337,21.353)
Image (generated by PyMOL):