Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:D43:D46
Extra
PDB:
ATOM 1 O3' G A 42 124.338 56.446 -8.194 1.00 60.57 O
ATOM 2 P U A 43 124.227 54.993 -7.513 1.00 60.67 P
ATOM 3 OP1 U A 43 124.598 54.006 -8.562 1.00 60.54 O
ATOM 4 OP2 U A 43 122.913 54.887 -6.841 1.00 59.92 O
ATOM 5 O5' U A 43 125.361 55.006 -6.394 1.00 59.17 O
ATOM 6 C5' U A 43 126.731 54.949 -6.771 1.00 56.62 C
ATOM 7 C4' U A 43 127.625 54.961 -5.558 1.00 55.30 C
ATOM 8 O4' U A 43 127.670 56.280 -4.965 1.00 55.48 O
ATOM 9 C3' U A 43 127.231 54.063 -4.405 1.00 54.27 C
ATOM 10 O3' U A 43 127.611 52.726 -4.687 1.00 55.80 O
ATOM 11 C2' U A 43 128.041 54.666 -3.257 1.00 53.99 C
ATOM 12 O2' U A 43 129.406 54.277 -3.227 1.00 54.57 O
ATOM 13 C1' U A 43 127.964 56.160 -3.583 1.00 53.62 C
ATOM 14 N1 U A 43 126.903 56.823 -2.823 1.00 51.81 N
ATOM 15 C2 U A 43 127.217 57.277 -1.572 1.00 51.20 C
ATOM 16 O2 U A 43 128.336 57.193 -1.107 1.00 50.80 O
ATOM 17 N3 U A 43 126.175 57.837 -0.887 1.00 51.00 N
ATOM 18 C4 U A 43 124.890 57.998 -1.337 1.00 50.80 C
ATOM 19 O4 U A 43 124.092 58.608 -0.652 1.00 51.28 O
ATOM 20 C5 U A 43 124.654 57.520 -2.649 1.00 50.58 C
ATOM 21 C6 U A 43 125.645 56.965 -3.332 1.00 51.55 C
ATOM 22 P A A 44 126.659 51.516 -4.235 1.00 55.77 P
ATOM 23 OP1 A A 44 127.426 50.243 -4.315 1.00 56.14 O
ATOM 24 OP2 A A 44 125.393 51.667 -5.001 1.00 57.20 O
ATOM 25 O5' A A 44 126.376 51.821 -2.703 1.00 53.72 O
TER
ATOM 1 O3' A B 45 127.476 57.289 3.763 1.00 50.30 O
ATOM 2 P U B 46 127.548 58.818 3.273 1.00 51.94 P
ATOM 3 OP1 U B 46 127.195 59.649 4.447 1.00 52.45 O
ATOM 4 OP2 U B 46 126.793 58.986 2.003 1.00 52.50 O
ATOM 5 O5' U B 46 129.096 58.998 2.953 1.00 51.50 O
ATOM 6 C5' U B 46 129.558 59.924 1.982 1.00 52.30 C
ATOM 7 C4' U B 46 131.062 60.018 2.058 1.00 53.41 C
ATOM 8 O4' U B 46 131.640 58.705 1.798 1.00 53.95 O
ATOM 9 C3' U B 46 131.753 60.931 1.058 1.00 53.90 C
ATOM 10 O3' U B 46 131.729 62.278 1.512 1.00 55.37 O
ATOM 11 C2' U B 46 133.164 60.363 1.096 1.00 53.92 C
ATOM 12 O2' U B 46 133.826 60.716 2.303 1.00 53.99 O
ATOM 13 C1' U B 46 132.866 58.856 1.089 1.00 53.05 C
ATOM 14 N1 U B 46 132.675 58.381 -0.292 1.00 50.67 N
ATOM 15 C2 U B 46 133.807 58.094 -1.046 1.00 49.68 C
ATOM 16 O2 U B 46 134.928 58.037 -0.567 1.00 50.22 O
ATOM 17 N3 U B 46 133.570 57.858 -2.377 1.00 47.17 N
ATOM 18 C4 U B 46 132.343 57.838 -3.005 1.00 47.36 C
ATOM 19 O4 U B 46 132.302 57.850 -4.231 1.00 48.27 O
ATOM 20 C5 U B 46 131.223 58.030 -2.137 1.00 47.42 C
ATOM 21 C6 U B 46 131.423 58.288 -0.845 1.00 48.49 C
ATOM 22 P A B 47 131.151 63.430 0.558 1.00 55.76 P
ATOM 23 OP1 A B 47 131.487 64.744 1.152 1.00 55.78 O
ATOM 24 OP2 A B 47 129.737 63.117 0.226 1.00 57.04 O
ATOM 25 O5' A B 47 131.990 63.269 -0.778 1.00 58.03 O
TER
ATOM 2 P U A 43 124.227 54.993 -7.513 1.00 60.67 P
ATOM 3 OP1 U A 43 124.598 54.006 -8.562 1.00 60.54 O
ATOM 4 OP2 U A 43 122.913 54.887 -6.841 1.00 59.92 O
ATOM 5 O5' U A 43 125.361 55.006 -6.394 1.00 59.17 O
ATOM 6 C5' U A 43 126.731 54.949 -6.771 1.00 56.62 C
ATOM 7 C4' U A 43 127.625 54.961 -5.558 1.00 55.30 C
ATOM 8 O4' U A 43 127.670 56.280 -4.965 1.00 55.48 O
ATOM 9 C3' U A 43 127.231 54.063 -4.405 1.00 54.27 C
ATOM 10 O3' U A 43 127.611 52.726 -4.687 1.00 55.80 O
ATOM 11 C2' U A 43 128.041 54.666 -3.257 1.00 53.99 C
ATOM 12 O2' U A 43 129.406 54.277 -3.227 1.00 54.57 O
ATOM 13 C1' U A 43 127.964 56.160 -3.583 1.00 53.62 C
ATOM 14 N1 U A 43 126.903 56.823 -2.823 1.00 51.81 N
ATOM 15 C2 U A 43 127.217 57.277 -1.572 1.00 51.20 C
ATOM 16 O2 U A 43 128.336 57.193 -1.107 1.00 50.80 O
ATOM 17 N3 U A 43 126.175 57.837 -0.887 1.00 51.00 N
ATOM 18 C4 U A 43 124.890 57.998 -1.337 1.00 50.80 C
ATOM 19 O4 U A 43 124.092 58.608 -0.652 1.00 51.28 O
ATOM 20 C5 U A 43 124.654 57.520 -2.649 1.00 50.58 C
ATOM 21 C6 U A 43 125.645 56.965 -3.332 1.00 51.55 C
ATOM 22 P A A 44 126.659 51.516 -4.235 1.00 55.77 P
ATOM 23 OP1 A A 44 127.426 50.243 -4.315 1.00 56.14 O
ATOM 24 OP2 A A 44 125.393 51.667 -5.001 1.00 57.20 O
ATOM 25 O5' A A 44 126.376 51.821 -2.703 1.00 53.72 O
TER
ATOM 1 O3' A B 45 127.476 57.289 3.763 1.00 50.30 O
ATOM 2 P U B 46 127.548 58.818 3.273 1.00 51.94 P
ATOM 3 OP1 U B 46 127.195 59.649 4.447 1.00 52.45 O
ATOM 4 OP2 U B 46 126.793 58.986 2.003 1.00 52.50 O
ATOM 5 O5' U B 46 129.096 58.998 2.953 1.00 51.50 O
ATOM 6 C5' U B 46 129.558 59.924 1.982 1.00 52.30 C
ATOM 7 C4' U B 46 131.062 60.018 2.058 1.00 53.41 C
ATOM 8 O4' U B 46 131.640 58.705 1.798 1.00 53.95 O
ATOM 9 C3' U B 46 131.753 60.931 1.058 1.00 53.90 C
ATOM 10 O3' U B 46 131.729 62.278 1.512 1.00 55.37 O
ATOM 11 C2' U B 46 133.164 60.363 1.096 1.00 53.92 C
ATOM 12 O2' U B 46 133.826 60.716 2.303 1.00 53.99 O
ATOM 13 C1' U B 46 132.866 58.856 1.089 1.00 53.05 C
ATOM 14 N1 U B 46 132.675 58.381 -0.292 1.00 50.67 N
ATOM 15 C2 U B 46 133.807 58.094 -1.046 1.00 49.68 C
ATOM 16 O2 U B 46 134.928 58.037 -0.567 1.00 50.22 O
ATOM 17 N3 U B 46 133.570 57.858 -2.377 1.00 47.17 N
ATOM 18 C4 U B 46 132.343 57.838 -3.005 1.00 47.36 C
ATOM 19 O4 U B 46 132.302 57.850 -4.231 1.00 48.27 O
ATOM 20 C5 U B 46 131.223 58.030 -2.137 1.00 47.42 C
ATOM 21 C6 U B 46 131.423 58.288 -0.845 1.00 48.49 C
ATOM 22 P A B 47 131.151 63.430 0.558 1.00 55.76 P
ATOM 23 OP1 A B 47 131.487 64.744 1.152 1.00 55.78 O
ATOM 24 OP2 A B 47 129.737 63.117 0.226 1.00 57.04 O
ATOM 25 O5' A B 47 131.990 63.269 -0.778 1.00 58.03 O
TER
Atoms:
C4: (124.890,57.998,-1.337)
N3: (126.175,57.837,-0.887)
OP1: (124.598,54.006,-8.562)
OP2: (122.913,54.887,-6.841)
C2: (127.217,57.277,-1.572)
C1': (127.964,56.160,-3.583)
C3': (127.231,54.063,-4.405)
O5': (125.361,55.006,-6.394)
O4': (127.670,56.280,-4.965)
C5': (126.731,54.949,-6.771)
P: (124.227,54.993,-7.513)
C4': (127.625,54.961,-5.558)
C2': (128.041,54.666,-3.257)
O2': (129.406,54.277,-3.227)
N1: (126.903,56.823,-2.823)
O4: (124.092,58.608,-0.652)
O2: (128.336,57.193,-1.107)
C6: (125.645,56.965,-3.332)
C5: (124.654,57.520,-2.649)
O3': (127.611,52.726,-4.687)
N3: (126.175,57.837,-0.887)
OP1: (124.598,54.006,-8.562)
OP2: (122.913,54.887,-6.841)
C2: (127.217,57.277,-1.572)
C1': (127.964,56.160,-3.583)
C3': (127.231,54.063,-4.405)
O5': (125.361,55.006,-6.394)
O4': (127.670,56.280,-4.965)
C5': (126.731,54.949,-6.771)
P: (124.227,54.993,-7.513)
C4': (127.625,54.961,-5.558)
C2': (128.041,54.666,-3.257)
O2': (129.406,54.277,-3.227)
N1: (126.903,56.823,-2.823)
O4: (124.092,58.608,-0.652)
O2: (128.336,57.193,-1.107)
C6: (125.645,56.965,-3.332)
C5: (124.654,57.520,-2.649)
O3': (127.611,52.726,-4.687)
C4: (132.343,57.838,-3.005)
N3: (133.570,57.858,-2.377)
OP1: (127.195,59.649,4.447)
OP2: (126.793,58.986,2.003)
C2: (133.807,58.094,-1.046)
C1': (132.866,58.856,1.089)
C3': (131.753,60.931,1.058)
O5': (129.096,58.998,2.953)
O4': (131.640,58.705,1.798)
C5': (129.558,59.924,1.982)
P: (127.548,58.818,3.273)
C4': (131.062,60.018,2.058)
C2': (133.164,60.363,1.096)
O2': (133.826,60.716,2.303)
N1: (132.675,58.381,-0.292)
O4: (132.302,57.850,-4.231)
O2: (134.928,58.037,-0.567)
C6: (131.423,58.288,-0.845)
C5: (131.223,58.030,-2.137)
O3': (131.729,62.278,1.512)
N3: (133.570,57.858,-2.377)
OP1: (127.195,59.649,4.447)
OP2: (126.793,58.986,2.003)
C2: (133.807,58.094,-1.046)
C1': (132.866,58.856,1.089)
C3': (131.753,60.931,1.058)
O5': (129.096,58.998,2.953)
O4': (131.640,58.705,1.798)
C5': (129.558,59.924,1.982)
P: (127.548,58.818,3.273)
C4': (131.062,60.018,2.058)
C2': (133.164,60.363,1.096)
O2': (133.826,60.716,2.303)
N1: (132.675,58.381,-0.292)
O4: (132.302,57.850,-4.231)
O2: (134.928,58.037,-0.567)
C6: (131.423,58.288,-0.845)
C5: (131.223,58.030,-2.137)
O3': (131.729,62.278,1.512)
Image (generated by PyMOL):