Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01089:02364
Extra
PDB:
ATOM 1 O3' C A1088 42.818 104.065 122.923 1.00 55.80 O
ATOM 2 P U A1089 44.084 104.844 123.535 1.00 60.01 P
ATOM 3 OP1 U A1089 43.752 105.215 124.935 1.00 58.36 O
ATOM 4 OP2 U A1089 44.504 105.898 122.571 1.00 60.44 O
ATOM 5 O5' U A1089 45.231 103.750 123.585 1.00 61.65 O
ATOM 6 C5' U A1089 45.454 103.006 124.778 1.00 68.09 C
ATOM 7 C4' U A1089 46.234 101.762 124.474 1.00 71.24 C
ATOM 8 O4' U A1089 47.522 102.128 123.903 1.00 73.48 O
ATOM 9 C3' U A1089 46.588 100.962 125.710 1.00 72.42 C
ATOM 10 O3' U A1089 45.483 100.174 126.152 1.00 70.50 O
ATOM 11 C2' U A1089 47.817 100.191 125.236 1.00 73.62 C
ATOM 12 O2' U A1089 47.523 99.099 124.386 1.00 73.75 O
ATOM 13 C1' U A1089 48.534 101.270 124.417 1.00 74.20 C
ATOM 14 N1 U A1089 49.468 102.079 125.225 1.00 75.54 N
ATOM 15 C2 U A1089 50.647 101.476 125.650 1.00 76.16 C
ATOM 16 O2 U A1089 50.946 100.323 125.364 1.00 77.05 O
ATOM 17 N3 U A1089 51.464 102.275 126.421 1.00 75.58 N
ATOM 18 C4 U A1089 51.235 103.585 126.798 1.00 75.05 C
ATOM 19 O4 U A1089 52.061 104.166 127.508 1.00 73.93 O
ATOM 20 C5 U A1089 50.007 104.140 126.311 1.00 75.45 C
ATOM 21 C6 U A1089 49.187 103.391 125.562 1.00 75.24 C
ATOM 22 P G A1090 44.973 100.294 127.681 1.00 69.78 P
ATOM 23 OP1 G A1090 43.668 99.577 127.731 1.00 69.23 O
ATOM 24 OP2 G A1090 45.063 101.702 128.151 1.00 67.65 O
ATOM 25 O5' G A1090 46.044 99.458 128.516 1.00 66.35 O
TER
ATOM 1 O3' G B2363 55.935 99.917 127.971 1.00 43.57 O
ATOM 2 P U B2364 55.631 100.784 126.658 1.00 44.26 P
ATOM 3 OP1 U B2364 54.149 100.786 126.517 1.00 43.43 O
ATOM 4 OP2 U B2364 56.485 100.303 125.531 1.00 42.21 O
ATOM 5 O5' U B2364 56.090 102.250 127.069 1.00 42.95 O
ATOM 6 C5' U B2364 55.341 103.006 128.036 1.00 42.00 C
ATOM 7 C4' U B2364 56.059 104.292 128.358 1.00 42.41 C
ATOM 8 O4' U B2364 57.330 103.998 129.002 1.00 41.97 O
ATOM 9 C3' U B2364 56.455 105.138 127.161 1.00 41.49 C
ATOM 10 O3' U B2364 55.377 105.906 126.664 1.00 41.93 O
ATOM 11 C2' U B2364 57.563 105.991 127.751 1.00 41.45 C
ATOM 12 O2' U B2364 57.036 106.991 128.602 1.00 39.45 O
ATOM 13 C1' U B2364 58.305 104.946 128.588 1.00 41.49 C
ATOM 14 N1 U B2364 59.344 104.231 127.822 1.00 41.31 N
ATOM 15 C2 U B2364 60.539 104.887 127.561 1.00 42.44 C
ATOM 16 O2 U B2364 60.765 106.028 127.912 1.00 45.86 O
ATOM 17 N3 U B2364 61.463 104.154 126.866 1.00 42.49 N
ATOM 18 C4 U B2364 61.324 102.866 126.408 1.00 44.03 C
ATOM 19 O4 U B2364 62.275 102.318 125.845 1.00 46.32 O
ATOM 20 C5 U B2364 60.061 102.263 126.699 1.00 43.75 C
ATOM 21 C6 U B2364 59.140 102.947 127.379 1.00 41.85 C
ATOM 22 P G B2365 55.322 106.290 125.099 1.00 43.63 P
ATOM 23 OP1 G B2365 53.941 106.805 124.856 1.00 39.95 O
ATOM 24 OP2 G B2365 55.842 105.149 124.286 1.00 40.26 O
ATOM 25 O5' G B2365 56.368 107.485 124.939 1.00 40.21 O
TER
ATOM 2 P U A1089 44.084 104.844 123.535 1.00 60.01 P
ATOM 3 OP1 U A1089 43.752 105.215 124.935 1.00 58.36 O
ATOM 4 OP2 U A1089 44.504 105.898 122.571 1.00 60.44 O
ATOM 5 O5' U A1089 45.231 103.750 123.585 1.00 61.65 O
ATOM 6 C5' U A1089 45.454 103.006 124.778 1.00 68.09 C
ATOM 7 C4' U A1089 46.234 101.762 124.474 1.00 71.24 C
ATOM 8 O4' U A1089 47.522 102.128 123.903 1.00 73.48 O
ATOM 9 C3' U A1089 46.588 100.962 125.710 1.00 72.42 C
ATOM 10 O3' U A1089 45.483 100.174 126.152 1.00 70.50 O
ATOM 11 C2' U A1089 47.817 100.191 125.236 1.00 73.62 C
ATOM 12 O2' U A1089 47.523 99.099 124.386 1.00 73.75 O
ATOM 13 C1' U A1089 48.534 101.270 124.417 1.00 74.20 C
ATOM 14 N1 U A1089 49.468 102.079 125.225 1.00 75.54 N
ATOM 15 C2 U A1089 50.647 101.476 125.650 1.00 76.16 C
ATOM 16 O2 U A1089 50.946 100.323 125.364 1.00 77.05 O
ATOM 17 N3 U A1089 51.464 102.275 126.421 1.00 75.58 N
ATOM 18 C4 U A1089 51.235 103.585 126.798 1.00 75.05 C
ATOM 19 O4 U A1089 52.061 104.166 127.508 1.00 73.93 O
ATOM 20 C5 U A1089 50.007 104.140 126.311 1.00 75.45 C
ATOM 21 C6 U A1089 49.187 103.391 125.562 1.00 75.24 C
ATOM 22 P G A1090 44.973 100.294 127.681 1.00 69.78 P
ATOM 23 OP1 G A1090 43.668 99.577 127.731 1.00 69.23 O
ATOM 24 OP2 G A1090 45.063 101.702 128.151 1.00 67.65 O
ATOM 25 O5' G A1090 46.044 99.458 128.516 1.00 66.35 O
TER
ATOM 1 O3' G B2363 55.935 99.917 127.971 1.00 43.57 O
ATOM 2 P U B2364 55.631 100.784 126.658 1.00 44.26 P
ATOM 3 OP1 U B2364 54.149 100.786 126.517 1.00 43.43 O
ATOM 4 OP2 U B2364 56.485 100.303 125.531 1.00 42.21 O
ATOM 5 O5' U B2364 56.090 102.250 127.069 1.00 42.95 O
ATOM 6 C5' U B2364 55.341 103.006 128.036 1.00 42.00 C
ATOM 7 C4' U B2364 56.059 104.292 128.358 1.00 42.41 C
ATOM 8 O4' U B2364 57.330 103.998 129.002 1.00 41.97 O
ATOM 9 C3' U B2364 56.455 105.138 127.161 1.00 41.49 C
ATOM 10 O3' U B2364 55.377 105.906 126.664 1.00 41.93 O
ATOM 11 C2' U B2364 57.563 105.991 127.751 1.00 41.45 C
ATOM 12 O2' U B2364 57.036 106.991 128.602 1.00 39.45 O
ATOM 13 C1' U B2364 58.305 104.946 128.588 1.00 41.49 C
ATOM 14 N1 U B2364 59.344 104.231 127.822 1.00 41.31 N
ATOM 15 C2 U B2364 60.539 104.887 127.561 1.00 42.44 C
ATOM 16 O2 U B2364 60.765 106.028 127.912 1.00 45.86 O
ATOM 17 N3 U B2364 61.463 104.154 126.866 1.00 42.49 N
ATOM 18 C4 U B2364 61.324 102.866 126.408 1.00 44.03 C
ATOM 19 O4 U B2364 62.275 102.318 125.845 1.00 46.32 O
ATOM 20 C5 U B2364 60.061 102.263 126.699 1.00 43.75 C
ATOM 21 C6 U B2364 59.140 102.947 127.379 1.00 41.85 C
ATOM 22 P G B2365 55.322 106.290 125.099 1.00 43.63 P
ATOM 23 OP1 G B2365 53.941 106.805 124.856 1.00 39.95 O
ATOM 24 OP2 G B2365 55.842 105.149 124.286 1.00 40.26 O
ATOM 25 O5' G B2365 56.368 107.485 124.939 1.00 40.21 O
TER
Atoms:
C4: (51.235,103.585,126.798)
N3: (51.464,102.275,126.421)
OP1: (43.752,105.215,124.935)
OP2: (44.504,105.898,122.571)
C2: (50.647,101.476,125.650)
C1': (48.534,101.270,124.417)
C3': (46.588,100.962,125.710)
O5': (45.231,103.750,123.585)
O4': (47.522,102.128,123.903)
C5': (45.454,103.006,124.778)
P: (44.084,104.844,123.535)
C4': (46.234,101.762,124.474)
C2': (47.817,100.191,125.236)
O2': (47.523,99.099,124.386)
N1: (49.468,102.079,125.225)
O4: (52.061,104.166,127.508)
O2: (50.946,100.323,125.364)
C6: (49.187,103.391,125.562)
C5: (50.007,104.140,126.311)
O3': (45.483,100.174,126.152)
N3: (51.464,102.275,126.421)
OP1: (43.752,105.215,124.935)
OP2: (44.504,105.898,122.571)
C2: (50.647,101.476,125.650)
C1': (48.534,101.270,124.417)
C3': (46.588,100.962,125.710)
O5': (45.231,103.750,123.585)
O4': (47.522,102.128,123.903)
C5': (45.454,103.006,124.778)
P: (44.084,104.844,123.535)
C4': (46.234,101.762,124.474)
C2': (47.817,100.191,125.236)
O2': (47.523,99.099,124.386)
N1: (49.468,102.079,125.225)
O4: (52.061,104.166,127.508)
O2: (50.946,100.323,125.364)
C6: (49.187,103.391,125.562)
C5: (50.007,104.140,126.311)
O3': (45.483,100.174,126.152)
C4: (61.324,102.866,126.408)
N3: (61.463,104.154,126.866)
OP1: (54.149,100.786,126.517)
OP2: (56.485,100.303,125.531)
C2: (60.539,104.887,127.561)
C1': (58.305,104.946,128.588)
C3': (56.455,105.138,127.161)
O5': (56.090,102.250,127.069)
O4': (57.330,103.998,129.002)
C5': (55.341,103.006,128.036)
P: (55.631,100.784,126.658)
C4': (56.059,104.292,128.358)
C2': (57.563,105.991,127.751)
O2': (57.036,106.991,128.602)
N1: (59.344,104.231,127.822)
O4: (62.275,102.318,125.845)
O2: (60.765,106.028,127.912)
C6: (59.140,102.947,127.379)
C5: (60.061,102.263,126.699)
O3': (55.377,105.906,126.664)
N3: (61.463,104.154,126.866)
OP1: (54.149,100.786,126.517)
OP2: (56.485,100.303,125.531)
C2: (60.539,104.887,127.561)
C1': (58.305,104.946,128.588)
C3': (56.455,105.138,127.161)
O5': (56.090,102.250,127.069)
O4': (57.330,103.998,129.002)
C5': (55.341,103.006,128.036)
P: (55.631,100.784,126.658)
C4': (56.059,104.292,128.358)
C2': (57.563,105.991,127.751)
O2': (57.036,106.991,128.602)
N1: (59.344,104.231,127.822)
O4: (62.275,102.318,125.845)
O2: (60.765,106.028,127.912)
C6: (59.140,102.947,127.379)
C5: (60.061,102.263,126.699)
O3': (55.377,105.906,126.664)
Image (generated by PyMOL):