Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01949:01923
Extra
PDB:
ATOM 1 O3' C A1948 112.855 117.756 118.477 1.00 58.35 O
ATOM 2 P U A1949 113.167 116.880 117.169 1.00 60.93 P
ATOM 3 OP1 U A1949 113.935 115.682 117.593 1.00 59.69 O
ATOM 4 OP2 U A1949 113.726 117.790 116.133 1.00 59.36 O
ATOM 5 O5' U A1949 111.739 116.387 116.671 1.00 62.90 O
ATOM 6 C5' U A1949 110.997 115.394 117.403 1.00 64.99 C
ATOM 7 C4' U A1949 109.699 115.094 116.694 1.00 66.81 C
ATOM 8 O4' U A1949 108.886 116.297 116.644 1.00 68.02 O
ATOM 9 C3' U A1949 109.829 114.696 115.234 1.00 67.71 C
ATOM 10 O3' U A1949 110.167 113.331 115.086 1.00 71.07 O
ATOM 11 C2' U A1949 108.446 115.018 114.694 1.00 67.69 C
ATOM 12 O2' U A1949 107.482 114.055 115.067 1.00 68.34 O
ATOM 13 C1' U A1949 108.148 116.324 115.429 1.00 66.89 C
ATOM 14 N1 U A1949 108.538 117.522 114.665 1.00 64.84 N
ATOM 15 C2 U A1949 107.527 118.280 114.096 1.00 63.27 C
ATOM 16 O2 U A1949 106.347 117.995 114.196 1.00 63.35 O
ATOM 17 N3 U A1949 107.951 119.384 113.401 1.00 61.99 N
ATOM 18 C4 U A1949 109.249 119.800 113.216 1.00 62.35 C
ATOM 19 O4 U A1949 109.469 120.829 112.575 1.00 61.14 O
ATOM 20 C5 U A1949 110.236 118.966 113.828 1.00 63.47 C
ATOM 21 C6 U A1949 109.858 117.884 114.514 1.00 63.51 C
ATOM 22 P U A1950 110.629 112.777 113.653 1.00 73.98 P
ATOM 23 OP1 U A1950 111.428 111.546 113.873 1.00 74.45 O
ATOM 24 OP2 U A1950 111.220 113.899 112.888 1.00 74.31 O
ATOM 25 O5' U A1950 109.263 112.362 112.947 1.00 77.32 O
TER
ATOM 1 O3' G B1922 105.756 121.979 110.422 1.00 44.21 O
ATOM 2 P U B1923 105.222 121.786 111.926 1.00 46.04 P
ATOM 3 OP1 U B1923 104.305 122.913 112.243 1.00 46.17 O
ATOM 4 OP2 U B1923 106.383 121.521 112.811 1.00 49.18 O
ATOM 5 O5' U B1923 104.343 120.460 111.863 1.00 45.25 O
ATOM 6 C5' U B1923 103.508 120.189 110.726 1.00 43.54 C
ATOM 7 C4' U B1923 102.066 120.017 111.146 1.00 43.49 C
ATOM 8 O4' U B1923 101.882 118.731 111.800 1.00 44.23 O
ATOM 9 C3' U B1923 101.477 121.072 112.077 1.00 42.08 C
ATOM 10 O3' U B1923 100.140 121.333 111.685 1.00 43.55 O
ATOM 11 C2' U B1923 101.487 120.371 113.433 1.00 43.68 C
ATOM 12 O2' U B1923 100.462 120.811 114.305 1.00 43.74 O
ATOM 13 C1' U B1923 101.220 118.922 113.033 1.00 44.30 C
ATOM 14 N1 U B1923 101.727 117.931 113.997 1.00 46.49 N
ATOM 15 C2 U B1923 100.800 117.124 114.642 1.00 47.76 C
ATOM 16 O2 U B1923 99.599 117.206 114.455 1.00 49.65 O
ATOM 17 N3 U B1923 101.334 116.213 115.516 1.00 48.15 N
ATOM 18 C4 U B1923 102.666 116.026 115.809 1.00 47.83 C
ATOM 19 O4 U B1923 102.991 115.121 116.579 1.00 48.73 O
ATOM 20 C5 U B1923 103.561 116.901 115.113 1.00 46.86 C
ATOM 21 C6 U B1923 103.075 117.799 114.253 1.00 45.41 C
ATOM 22 P A B1924 99.713 122.819 111.250 1.00 44.26 P
ATOM 23 OP1 A B1924 100.149 123.751 112.327 1.00 45.25 O
ATOM 24 OP2 A B1924 98.286 122.790 110.847 1.00 47.05 O
ATOM 25 O5' A B1924 100.577 123.093 109.943 1.00 42.06 O
TER
ATOM 2 P U A1949 113.167 116.880 117.169 1.00 60.93 P
ATOM 3 OP1 U A1949 113.935 115.682 117.593 1.00 59.69 O
ATOM 4 OP2 U A1949 113.726 117.790 116.133 1.00 59.36 O
ATOM 5 O5' U A1949 111.739 116.387 116.671 1.00 62.90 O
ATOM 6 C5' U A1949 110.997 115.394 117.403 1.00 64.99 C
ATOM 7 C4' U A1949 109.699 115.094 116.694 1.00 66.81 C
ATOM 8 O4' U A1949 108.886 116.297 116.644 1.00 68.02 O
ATOM 9 C3' U A1949 109.829 114.696 115.234 1.00 67.71 C
ATOM 10 O3' U A1949 110.167 113.331 115.086 1.00 71.07 O
ATOM 11 C2' U A1949 108.446 115.018 114.694 1.00 67.69 C
ATOM 12 O2' U A1949 107.482 114.055 115.067 1.00 68.34 O
ATOM 13 C1' U A1949 108.148 116.324 115.429 1.00 66.89 C
ATOM 14 N1 U A1949 108.538 117.522 114.665 1.00 64.84 N
ATOM 15 C2 U A1949 107.527 118.280 114.096 1.00 63.27 C
ATOM 16 O2 U A1949 106.347 117.995 114.196 1.00 63.35 O
ATOM 17 N3 U A1949 107.951 119.384 113.401 1.00 61.99 N
ATOM 18 C4 U A1949 109.249 119.800 113.216 1.00 62.35 C
ATOM 19 O4 U A1949 109.469 120.829 112.575 1.00 61.14 O
ATOM 20 C5 U A1949 110.236 118.966 113.828 1.00 63.47 C
ATOM 21 C6 U A1949 109.858 117.884 114.514 1.00 63.51 C
ATOM 22 P U A1950 110.629 112.777 113.653 1.00 73.98 P
ATOM 23 OP1 U A1950 111.428 111.546 113.873 1.00 74.45 O
ATOM 24 OP2 U A1950 111.220 113.899 112.888 1.00 74.31 O
ATOM 25 O5' U A1950 109.263 112.362 112.947 1.00 77.32 O
TER
ATOM 1 O3' G B1922 105.756 121.979 110.422 1.00 44.21 O
ATOM 2 P U B1923 105.222 121.786 111.926 1.00 46.04 P
ATOM 3 OP1 U B1923 104.305 122.913 112.243 1.00 46.17 O
ATOM 4 OP2 U B1923 106.383 121.521 112.811 1.00 49.18 O
ATOM 5 O5' U B1923 104.343 120.460 111.863 1.00 45.25 O
ATOM 6 C5' U B1923 103.508 120.189 110.726 1.00 43.54 C
ATOM 7 C4' U B1923 102.066 120.017 111.146 1.00 43.49 C
ATOM 8 O4' U B1923 101.882 118.731 111.800 1.00 44.23 O
ATOM 9 C3' U B1923 101.477 121.072 112.077 1.00 42.08 C
ATOM 10 O3' U B1923 100.140 121.333 111.685 1.00 43.55 O
ATOM 11 C2' U B1923 101.487 120.371 113.433 1.00 43.68 C
ATOM 12 O2' U B1923 100.462 120.811 114.305 1.00 43.74 O
ATOM 13 C1' U B1923 101.220 118.922 113.033 1.00 44.30 C
ATOM 14 N1 U B1923 101.727 117.931 113.997 1.00 46.49 N
ATOM 15 C2 U B1923 100.800 117.124 114.642 1.00 47.76 C
ATOM 16 O2 U B1923 99.599 117.206 114.455 1.00 49.65 O
ATOM 17 N3 U B1923 101.334 116.213 115.516 1.00 48.15 N
ATOM 18 C4 U B1923 102.666 116.026 115.809 1.00 47.83 C
ATOM 19 O4 U B1923 102.991 115.121 116.579 1.00 48.73 O
ATOM 20 C5 U B1923 103.561 116.901 115.113 1.00 46.86 C
ATOM 21 C6 U B1923 103.075 117.799 114.253 1.00 45.41 C
ATOM 22 P A B1924 99.713 122.819 111.250 1.00 44.26 P
ATOM 23 OP1 A B1924 100.149 123.751 112.327 1.00 45.25 O
ATOM 24 OP2 A B1924 98.286 122.790 110.847 1.00 47.05 O
ATOM 25 O5' A B1924 100.577 123.093 109.943 1.00 42.06 O
TER
Atoms:
C4: (109.249,119.800,113.216)
N3: (107.951,119.384,113.401)
OP1: (113.935,115.682,117.593)
OP2: (113.726,117.790,116.133)
C2: (107.527,118.280,114.096)
C1': (108.148,116.324,115.429)
C3': (109.829,114.696,115.234)
O5': (111.739,116.387,116.671)
O4': (108.886,116.297,116.644)
C5': (110.997,115.394,117.403)
P: (113.167,116.880,117.169)
C4': (109.699,115.094,116.694)
C2': (108.446,115.018,114.694)
O2': (107.482,114.055,115.067)
N1: (108.538,117.522,114.665)
O4: (109.469,120.829,112.575)
O2: (106.347,117.995,114.196)
C6: (109.858,117.884,114.514)
C5: (110.236,118.966,113.828)
O3': (110.167,113.331,115.086)
N3: (107.951,119.384,113.401)
OP1: (113.935,115.682,117.593)
OP2: (113.726,117.790,116.133)
C2: (107.527,118.280,114.096)
C1': (108.148,116.324,115.429)
C3': (109.829,114.696,115.234)
O5': (111.739,116.387,116.671)
O4': (108.886,116.297,116.644)
C5': (110.997,115.394,117.403)
P: (113.167,116.880,117.169)
C4': (109.699,115.094,116.694)
C2': (108.446,115.018,114.694)
O2': (107.482,114.055,115.067)
N1: (108.538,117.522,114.665)
O4: (109.469,120.829,112.575)
O2: (106.347,117.995,114.196)
C6: (109.858,117.884,114.514)
C5: (110.236,118.966,113.828)
O3': (110.167,113.331,115.086)
C4: (102.666,116.026,115.809)
N3: (101.334,116.213,115.516)
OP1: (104.305,122.913,112.243)
OP2: (106.383,121.521,112.811)
C2: (100.800,117.124,114.642)
C1': (101.220,118.922,113.033)
C3': (101.477,121.072,112.077)
O5': (104.343,120.460,111.863)
O4': (101.882,118.731,111.800)
C5': (103.508,120.189,110.726)
P: (105.222,121.786,111.926)
C4': (102.066,120.017,111.146)
C2': (101.487,120.371,113.433)
O2': (100.462,120.811,114.305)
N1: (101.727,117.931,113.997)
O4: (102.991,115.121,116.579)
O2: (99.599,117.206,114.455)
C6: (103.075,117.799,114.253)
C5: (103.561,116.901,115.113)
O3': (100.140,121.333,111.685)
N3: (101.334,116.213,115.516)
OP1: (104.305,122.913,112.243)
OP2: (106.383,121.521,112.811)
C2: (100.800,117.124,114.642)
C1': (101.220,118.922,113.033)
C3': (101.477,121.072,112.077)
O5': (104.343,120.460,111.863)
O4': (101.882,118.731,111.800)
C5': (103.508,120.189,110.726)
P: (105.222,121.786,111.926)
C4': (102.066,120.017,111.146)
C2': (101.487,120.371,113.433)
O2': (100.462,120.811,114.305)
N1: (101.727,117.931,113.997)
O4: (102.991,115.121,116.579)
O2: (99.599,117.206,114.455)
C6: (103.075,117.799,114.253)
C5: (103.561,116.901,115.113)
O3': (100.140,121.333,111.685)
Image (generated by PyMOL):