Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01089:02364
Extra
PDB:
ATOM 1 O3' C A1088 43.003 104.108 123.228 1.00 60.57 O
ATOM 2 P U A1089 44.216 104.929 123.879 1.00 63.45 P
ATOM 3 OP1 U A1089 43.837 105.277 125.272 1.00 62.49 O
ATOM 4 OP2 U A1089 44.618 105.999 122.936 1.00 64.81 O
ATOM 5 O5' U A1089 45.390 103.872 123.951 1.00 65.34 O
ATOM 6 C5' U A1089 45.540 103.065 125.110 1.00 71.80 C
ATOM 7 C4' U A1089 46.216 101.780 124.753 1.00 74.89 C
ATOM 8 O4' U A1089 47.476 102.084 124.095 1.00 77.14 O
ATOM 9 C3' U A1089 46.601 100.944 125.957 1.00 75.91 C
ATOM 10 O3' U A1089 45.500 100.182 126.457 1.00 72.34 O
ATOM 11 C2' U A1089 47.780 100.145 125.413 1.00 77.63 C
ATOM 12 O2' U A1089 47.390 99.082 124.561 1.00 78.21 O
ATOM 13 C1' U A1089 48.492 101.218 124.580 1.00 78.41 C
ATOM 14 N1 U A1089 49.460 102.029 125.348 1.00 80.69 N
ATOM 15 C2 U A1089 50.599 101.397 125.834 1.00 81.93 C
ATOM 16 O2 U A1089 50.847 100.215 125.624 1.00 82.67 O
ATOM 17 N3 U A1089 51.443 102.203 126.569 1.00 81.71 N
ATOM 18 C4 U A1089 51.284 103.548 126.848 1.00 80.72 C
ATOM 19 O4 U A1089 52.136 104.131 127.523 1.00 80.24 O
ATOM 20 C5 U A1089 50.098 104.136 126.298 1.00 80.64 C
ATOM 21 C6 U A1089 49.248 103.380 125.588 1.00 80.88 C
ATOM 22 P G A1090 45.071 100.326 128.009 1.00 70.91 P
ATOM 23 OP1 G A1090 43.871 99.465 128.196 1.00 71.69 O
ATOM 24 OP2 G A1090 45.001 101.769 128.359 1.00 69.19 O
ATOM 25 O5' G A1090 46.293 99.686 128.815 1.00 65.27 O
TER
ATOM 1 O3' G B2363 56.190 99.977 128.279 1.00 43.77 O
ATOM 2 P U B2364 55.965 100.947 127.033 1.00 45.23 P
ATOM 3 OP1 U B2364 54.491 100.980 126.808 1.00 43.32 O
ATOM 4 OP2 U B2364 56.883 100.522 125.938 1.00 44.39 O
ATOM 5 O5' U B2364 56.445 102.366 127.566 1.00 42.49 O
ATOM 6 C5' U B2364 55.604 103.153 128.423 1.00 42.69 C
ATOM 7 C4' U B2364 56.272 104.466 128.735 1.00 41.93 C
ATOM 8 O4' U B2364 57.541 104.216 129.399 1.00 41.67 O
ATOM 9 C3' U B2364 56.658 105.294 127.522 1.00 40.77 C
ATOM 10 O3' U B2364 55.572 106.059 127.042 1.00 42.93 O
ATOM 11 C2' U B2364 57.753 106.172 128.089 1.00 40.57 C
ATOM 12 O2' U B2364 57.216 107.185 128.916 1.00 41.34 O
ATOM 13 C1' U B2364 58.501 105.163 128.957 1.00 40.39 C
ATOM 14 N1 U B2364 59.558 104.452 128.220 1.00 39.17 N
ATOM 15 C2 U B2364 60.741 105.116 127.995 1.00 40.34 C
ATOM 16 O2 U B2364 60.933 106.265 128.341 1.00 42.45 O
ATOM 17 N3 U B2364 61.698 104.392 127.342 1.00 40.54 N
ATOM 18 C4 U B2364 61.592 103.112 126.887 1.00 42.06 C
ATOM 19 O4 U B2364 62.548 102.597 126.312 1.00 45.60 O
ATOM 20 C5 U B2364 60.333 102.495 127.137 1.00 41.43 C
ATOM 21 C6 U B2364 59.384 103.169 127.778 1.00 39.87 C
ATOM 22 P G B2365 55.526 106.496 125.498 1.00 44.29 P
ATOM 23 OP1 G B2365 54.157 107.032 125.292 1.00 41.68 O
ATOM 24 OP2 G B2365 56.021 105.365 124.659 1.00 41.22 O
ATOM 25 O5' G B2365 56.586 107.676 125.356 1.00 40.45 O
TER
ATOM 2 P U A1089 44.216 104.929 123.879 1.00 63.45 P
ATOM 3 OP1 U A1089 43.837 105.277 125.272 1.00 62.49 O
ATOM 4 OP2 U A1089 44.618 105.999 122.936 1.00 64.81 O
ATOM 5 O5' U A1089 45.390 103.872 123.951 1.00 65.34 O
ATOM 6 C5' U A1089 45.540 103.065 125.110 1.00 71.80 C
ATOM 7 C4' U A1089 46.216 101.780 124.753 1.00 74.89 C
ATOM 8 O4' U A1089 47.476 102.084 124.095 1.00 77.14 O
ATOM 9 C3' U A1089 46.601 100.944 125.957 1.00 75.91 C
ATOM 10 O3' U A1089 45.500 100.182 126.457 1.00 72.34 O
ATOM 11 C2' U A1089 47.780 100.145 125.413 1.00 77.63 C
ATOM 12 O2' U A1089 47.390 99.082 124.561 1.00 78.21 O
ATOM 13 C1' U A1089 48.492 101.218 124.580 1.00 78.41 C
ATOM 14 N1 U A1089 49.460 102.029 125.348 1.00 80.69 N
ATOM 15 C2 U A1089 50.599 101.397 125.834 1.00 81.93 C
ATOM 16 O2 U A1089 50.847 100.215 125.624 1.00 82.67 O
ATOM 17 N3 U A1089 51.443 102.203 126.569 1.00 81.71 N
ATOM 18 C4 U A1089 51.284 103.548 126.848 1.00 80.72 C
ATOM 19 O4 U A1089 52.136 104.131 127.523 1.00 80.24 O
ATOM 20 C5 U A1089 50.098 104.136 126.298 1.00 80.64 C
ATOM 21 C6 U A1089 49.248 103.380 125.588 1.00 80.88 C
ATOM 22 P G A1090 45.071 100.326 128.009 1.00 70.91 P
ATOM 23 OP1 G A1090 43.871 99.465 128.196 1.00 71.69 O
ATOM 24 OP2 G A1090 45.001 101.769 128.359 1.00 69.19 O
ATOM 25 O5' G A1090 46.293 99.686 128.815 1.00 65.27 O
TER
ATOM 1 O3' G B2363 56.190 99.977 128.279 1.00 43.77 O
ATOM 2 P U B2364 55.965 100.947 127.033 1.00 45.23 P
ATOM 3 OP1 U B2364 54.491 100.980 126.808 1.00 43.32 O
ATOM 4 OP2 U B2364 56.883 100.522 125.938 1.00 44.39 O
ATOM 5 O5' U B2364 56.445 102.366 127.566 1.00 42.49 O
ATOM 6 C5' U B2364 55.604 103.153 128.423 1.00 42.69 C
ATOM 7 C4' U B2364 56.272 104.466 128.735 1.00 41.93 C
ATOM 8 O4' U B2364 57.541 104.216 129.399 1.00 41.67 O
ATOM 9 C3' U B2364 56.658 105.294 127.522 1.00 40.77 C
ATOM 10 O3' U B2364 55.572 106.059 127.042 1.00 42.93 O
ATOM 11 C2' U B2364 57.753 106.172 128.089 1.00 40.57 C
ATOM 12 O2' U B2364 57.216 107.185 128.916 1.00 41.34 O
ATOM 13 C1' U B2364 58.501 105.163 128.957 1.00 40.39 C
ATOM 14 N1 U B2364 59.558 104.452 128.220 1.00 39.17 N
ATOM 15 C2 U B2364 60.741 105.116 127.995 1.00 40.34 C
ATOM 16 O2 U B2364 60.933 106.265 128.341 1.00 42.45 O
ATOM 17 N3 U B2364 61.698 104.392 127.342 1.00 40.54 N
ATOM 18 C4 U B2364 61.592 103.112 126.887 1.00 42.06 C
ATOM 19 O4 U B2364 62.548 102.597 126.312 1.00 45.60 O
ATOM 20 C5 U B2364 60.333 102.495 127.137 1.00 41.43 C
ATOM 21 C6 U B2364 59.384 103.169 127.778 1.00 39.87 C
ATOM 22 P G B2365 55.526 106.496 125.498 1.00 44.29 P
ATOM 23 OP1 G B2365 54.157 107.032 125.292 1.00 41.68 O
ATOM 24 OP2 G B2365 56.021 105.365 124.659 1.00 41.22 O
ATOM 25 O5' G B2365 56.586 107.676 125.356 1.00 40.45 O
TER
Atoms:
C4: (51.284,103.548,126.848)
N3: (51.443,102.203,126.569)
OP1: (43.837,105.277,125.272)
OP2: (44.618,105.999,122.936)
C2: (50.599,101.397,125.834)
C1': (48.492,101.218,124.580)
C3': (46.601,100.944,125.957)
O5': (45.390,103.872,123.951)
O4': (47.476,102.084,124.095)
C5': (45.540,103.065,125.110)
P: (44.216,104.929,123.879)
C4': (46.216,101.780,124.753)
C2': (47.780,100.145,125.413)
O2': (47.390,99.082,124.561)
N1: (49.460,102.029,125.348)
O4: (52.136,104.131,127.523)
O2: (50.847,100.215,125.624)
C6: (49.248,103.380,125.588)
C5: (50.098,104.136,126.298)
O3': (45.500,100.182,126.457)
N3: (51.443,102.203,126.569)
OP1: (43.837,105.277,125.272)
OP2: (44.618,105.999,122.936)
C2: (50.599,101.397,125.834)
C1': (48.492,101.218,124.580)
C3': (46.601,100.944,125.957)
O5': (45.390,103.872,123.951)
O4': (47.476,102.084,124.095)
C5': (45.540,103.065,125.110)
P: (44.216,104.929,123.879)
C4': (46.216,101.780,124.753)
C2': (47.780,100.145,125.413)
O2': (47.390,99.082,124.561)
N1: (49.460,102.029,125.348)
O4: (52.136,104.131,127.523)
O2: (50.847,100.215,125.624)
C6: (49.248,103.380,125.588)
C5: (50.098,104.136,126.298)
O3': (45.500,100.182,126.457)
C4: (61.592,103.112,126.887)
N3: (61.698,104.392,127.342)
OP1: (54.491,100.980,126.808)
OP2: (56.883,100.522,125.938)
C2: (60.741,105.116,127.995)
C1': (58.501,105.163,128.957)
C3': (56.658,105.294,127.522)
O5': (56.445,102.366,127.566)
O4': (57.541,104.216,129.399)
C5': (55.604,103.153,128.423)
P: (55.965,100.947,127.033)
C4': (56.272,104.466,128.735)
C2': (57.753,106.172,128.089)
O2': (57.216,107.185,128.916)
N1: (59.558,104.452,128.220)
O4: (62.548,102.597,126.312)
O2: (60.933,106.265,128.341)
C6: (59.384,103.169,127.778)
C5: (60.333,102.495,127.137)
O3': (55.572,106.059,127.042)
N3: (61.698,104.392,127.342)
OP1: (54.491,100.980,126.808)
OP2: (56.883,100.522,125.938)
C2: (60.741,105.116,127.995)
C1': (58.501,105.163,128.957)
C3': (56.658,105.294,127.522)
O5': (56.445,102.366,127.566)
O4': (57.541,104.216,129.399)
C5': (55.604,103.153,128.423)
P: (55.965,100.947,127.033)
C4': (56.272,104.466,128.735)
C2': (57.753,106.172,128.089)
O2': (57.216,107.185,128.916)
N1: (59.558,104.452,128.220)
O4: (62.548,102.597,126.312)
O2: (60.933,106.265,128.341)
C6: (59.384,103.169,127.778)
C5: (60.333,102.495,127.137)
O3': (55.572,106.059,127.042)
Image (generated by PyMOL):