Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01949:01923
Extra
PDB:
ATOM 1 O3' C A1948 113.048 117.749 118.929 1.00 67.96 O
ATOM 2 P U A1949 113.428 116.947 117.589 1.00 70.07 P
ATOM 3 OP1 U A1949 114.235 115.767 117.965 1.00 70.28 O
ATOM 4 OP2 U A1949 113.970 117.925 116.607 1.00 68.95 O
ATOM 5 O5' U A1949 112.029 116.406 117.045 1.00 72.80 O
ATOM 6 C5' U A1949 111.237 115.461 117.802 1.00 73.61 C
ATOM 7 C4' U A1949 109.927 115.185 117.091 1.00 74.92 C
ATOM 8 O4' U A1949 109.120 116.394 117.051 1.00 76.26 O
ATOM 9 C3' U A1949 110.043 114.792 115.630 1.00 75.71 C
ATOM 10 O3' U A1949 110.341 113.426 115.471 1.00 79.24 O
ATOM 11 C2' U A1949 108.668 115.137 115.090 1.00 75.53 C
ATOM 12 O2' U A1949 107.708 114.165 115.441 1.00 74.09 O
ATOM 13 C1' U A1949 108.387 116.444 115.833 1.00 75.52 C
ATOM 14 N1 U A1949 108.808 117.642 115.082 1.00 75.86 N
ATOM 15 C2 U A1949 107.821 118.471 114.573 1.00 75.84 C
ATOM 16 O2 U A1949 106.633 118.260 114.724 1.00 77.60 O
ATOM 17 N3 U A1949 108.279 119.559 113.874 1.00 75.70 N
ATOM 18 C4 U A1949 109.594 119.899 113.629 1.00 76.51 C
ATOM 19 O4 U A1949 109.848 120.888 112.934 1.00 76.53 O
ATOM 20 C5 U A1949 110.555 119.002 114.194 1.00 76.13 C
ATOM 21 C6 U A1949 110.142 117.934 114.882 1.00 75.53 C
ATOM 22 P U A1950 110.846 112.887 114.050 1.00 82.67 P
ATOM 23 OP1 U A1950 111.688 111.691 114.306 1.00 82.37 O
ATOM 24 OP2 U A1950 111.405 114.018 113.273 1.00 81.95 O
ATOM 25 O5' U A1950 109.509 112.416 113.326 1.00 85.27 O
TER
ATOM 1 O3' G B1922 106.002 122.021 110.791 1.00 53.64 O
ATOM 2 P U B1923 105.482 121.836 112.302 1.00 53.93 P
ATOM 3 OP1 U B1923 104.615 122.991 112.614 1.00 54.78 O
ATOM 4 OP2 U B1923 106.632 121.526 113.189 1.00 55.37 O
ATOM 5 O5' U B1923 104.565 120.538 112.247 1.00 53.80 O
ATOM 6 C5' U B1923 103.692 120.306 111.129 1.00 53.92 C
ATOM 7 C4' U B1923 102.255 120.172 111.582 1.00 53.05 C
ATOM 8 O4' U B1923 102.066 118.903 112.266 1.00 52.42 O
ATOM 9 C3' U B1923 101.703 121.252 112.505 1.00 52.23 C
ATOM 10 O3' U B1923 100.370 121.548 112.118 1.00 55.37 O
ATOM 11 C2' U B1923 101.714 120.567 113.870 1.00 52.37 C
ATOM 12 O2' U B1923 100.711 121.040 114.743 1.00 51.94 O
ATOM 13 C1' U B1923 101.409 119.123 113.490 1.00 52.59 C
ATOM 14 N1 U B1923 101.877 118.119 114.458 1.00 54.98 N
ATOM 15 C2 U B1923 100.920 117.317 115.063 1.00 57.32 C
ATOM 16 O2 U B1923 99.726 117.410 114.826 1.00 59.43 O
ATOM 17 N3 U B1923 101.412 116.397 115.954 1.00 57.62 N
ATOM 18 C4 U B1923 102.732 116.195 116.295 1.00 58.19 C
ATOM 19 O4 U B1923 103.017 115.298 117.087 1.00 59.03 O
ATOM 20 C5 U B1923 103.661 117.062 115.632 1.00 56.58 C
ATOM 21 C6 U B1923 103.213 117.970 114.758 1.00 55.04 C
ATOM 22 P A B1924 100.004 123.020 111.576 1.00 57.25 P
ATOM 23 OP1 A B1924 100.428 124.006 112.611 1.00 58.03 O
ATOM 24 OP2 A B1924 98.592 123.012 111.105 1.00 58.57 O
ATOM 25 O5' A B1924 100.941 123.207 110.305 1.00 55.68 O
TER
ATOM 2 P U A1949 113.428 116.947 117.589 1.00 70.07 P
ATOM 3 OP1 U A1949 114.235 115.767 117.965 1.00 70.28 O
ATOM 4 OP2 U A1949 113.970 117.925 116.607 1.00 68.95 O
ATOM 5 O5' U A1949 112.029 116.406 117.045 1.00 72.80 O
ATOM 6 C5' U A1949 111.237 115.461 117.802 1.00 73.61 C
ATOM 7 C4' U A1949 109.927 115.185 117.091 1.00 74.92 C
ATOM 8 O4' U A1949 109.120 116.394 117.051 1.00 76.26 O
ATOM 9 C3' U A1949 110.043 114.792 115.630 1.00 75.71 C
ATOM 10 O3' U A1949 110.341 113.426 115.471 1.00 79.24 O
ATOM 11 C2' U A1949 108.668 115.137 115.090 1.00 75.53 C
ATOM 12 O2' U A1949 107.708 114.165 115.441 1.00 74.09 O
ATOM 13 C1' U A1949 108.387 116.444 115.833 1.00 75.52 C
ATOM 14 N1 U A1949 108.808 117.642 115.082 1.00 75.86 N
ATOM 15 C2 U A1949 107.821 118.471 114.573 1.00 75.84 C
ATOM 16 O2 U A1949 106.633 118.260 114.724 1.00 77.60 O
ATOM 17 N3 U A1949 108.279 119.559 113.874 1.00 75.70 N
ATOM 18 C4 U A1949 109.594 119.899 113.629 1.00 76.51 C
ATOM 19 O4 U A1949 109.848 120.888 112.934 1.00 76.53 O
ATOM 20 C5 U A1949 110.555 119.002 114.194 1.00 76.13 C
ATOM 21 C6 U A1949 110.142 117.934 114.882 1.00 75.53 C
ATOM 22 P U A1950 110.846 112.887 114.050 1.00 82.67 P
ATOM 23 OP1 U A1950 111.688 111.691 114.306 1.00 82.37 O
ATOM 24 OP2 U A1950 111.405 114.018 113.273 1.00 81.95 O
ATOM 25 O5' U A1950 109.509 112.416 113.326 1.00 85.27 O
TER
ATOM 1 O3' G B1922 106.002 122.021 110.791 1.00 53.64 O
ATOM 2 P U B1923 105.482 121.836 112.302 1.00 53.93 P
ATOM 3 OP1 U B1923 104.615 122.991 112.614 1.00 54.78 O
ATOM 4 OP2 U B1923 106.632 121.526 113.189 1.00 55.37 O
ATOM 5 O5' U B1923 104.565 120.538 112.247 1.00 53.80 O
ATOM 6 C5' U B1923 103.692 120.306 111.129 1.00 53.92 C
ATOM 7 C4' U B1923 102.255 120.172 111.582 1.00 53.05 C
ATOM 8 O4' U B1923 102.066 118.903 112.266 1.00 52.42 O
ATOM 9 C3' U B1923 101.703 121.252 112.505 1.00 52.23 C
ATOM 10 O3' U B1923 100.370 121.548 112.118 1.00 55.37 O
ATOM 11 C2' U B1923 101.714 120.567 113.870 1.00 52.37 C
ATOM 12 O2' U B1923 100.711 121.040 114.743 1.00 51.94 O
ATOM 13 C1' U B1923 101.409 119.123 113.490 1.00 52.59 C
ATOM 14 N1 U B1923 101.877 118.119 114.458 1.00 54.98 N
ATOM 15 C2 U B1923 100.920 117.317 115.063 1.00 57.32 C
ATOM 16 O2 U B1923 99.726 117.410 114.826 1.00 59.43 O
ATOM 17 N3 U B1923 101.412 116.397 115.954 1.00 57.62 N
ATOM 18 C4 U B1923 102.732 116.195 116.295 1.00 58.19 C
ATOM 19 O4 U B1923 103.017 115.298 117.087 1.00 59.03 O
ATOM 20 C5 U B1923 103.661 117.062 115.632 1.00 56.58 C
ATOM 21 C6 U B1923 103.213 117.970 114.758 1.00 55.04 C
ATOM 22 P A B1924 100.004 123.020 111.576 1.00 57.25 P
ATOM 23 OP1 A B1924 100.428 124.006 112.611 1.00 58.03 O
ATOM 24 OP2 A B1924 98.592 123.012 111.105 1.00 58.57 O
ATOM 25 O5' A B1924 100.941 123.207 110.305 1.00 55.68 O
TER
Atoms:
C4: (109.594,119.899,113.629)
N3: (108.279,119.559,113.874)
OP1: (114.235,115.767,117.965)
OP2: (113.970,117.925,116.607)
C2: (107.821,118.471,114.573)
C1': (108.387,116.444,115.833)
C3': (110.043,114.792,115.630)
O5': (112.029,116.406,117.045)
O4': (109.120,116.394,117.051)
C5': (111.237,115.461,117.802)
P: (113.428,116.947,117.589)
C4': (109.927,115.185,117.091)
C2': (108.668,115.137,115.090)
O2': (107.708,114.165,115.441)
N1: (108.808,117.642,115.082)
O4: (109.848,120.888,112.934)
O2: (106.633,118.260,114.724)
C6: (110.142,117.934,114.882)
C5: (110.555,119.002,114.194)
O3': (110.341,113.426,115.471)
N3: (108.279,119.559,113.874)
OP1: (114.235,115.767,117.965)
OP2: (113.970,117.925,116.607)
C2: (107.821,118.471,114.573)
C1': (108.387,116.444,115.833)
C3': (110.043,114.792,115.630)
O5': (112.029,116.406,117.045)
O4': (109.120,116.394,117.051)
C5': (111.237,115.461,117.802)
P: (113.428,116.947,117.589)
C4': (109.927,115.185,117.091)
C2': (108.668,115.137,115.090)
O2': (107.708,114.165,115.441)
N1: (108.808,117.642,115.082)
O4: (109.848,120.888,112.934)
O2: (106.633,118.260,114.724)
C6: (110.142,117.934,114.882)
C5: (110.555,119.002,114.194)
O3': (110.341,113.426,115.471)
C4: (102.732,116.195,116.295)
N3: (101.412,116.397,115.954)
OP1: (104.615,122.991,112.614)
OP2: (106.632,121.526,113.189)
C2: (100.920,117.317,115.063)
C1': (101.409,119.123,113.490)
C3': (101.703,121.252,112.505)
O5': (104.565,120.538,112.247)
O4': (102.066,118.903,112.266)
C5': (103.692,120.306,111.129)
P: (105.482,121.836,112.302)
C4': (102.255,120.172,111.582)
C2': (101.714,120.567,113.870)
O2': (100.711,121.040,114.743)
N1: (101.877,118.119,114.458)
O4: (103.017,115.298,117.087)
O2: (99.726,117.410,114.826)
C6: (103.213,117.970,114.758)
C5: (103.661,117.062,115.632)
O3': (100.370,121.548,112.118)
N3: (101.412,116.397,115.954)
OP1: (104.615,122.991,112.614)
OP2: (106.632,121.526,113.189)
C2: (100.920,117.317,115.063)
C1': (101.409,119.123,113.490)
C3': (101.703,121.252,112.505)
O5': (104.565,120.538,112.247)
O4': (102.066,118.903,112.266)
C5': (103.692,120.306,111.129)
P: (105.482,121.836,112.302)
C4': (102.255,120.172,111.582)
C2': (101.714,120.567,113.870)
O2': (100.711,121.040,114.743)
N1: (101.877,118.119,114.458)
O4: (103.017,115.298,117.087)
O2: (99.726,117.410,114.826)
C6: (103.213,117.970,114.758)
C5: (103.661,117.062,115.632)
O3': (100.370,121.548,112.118)
Image (generated by PyMOL):