Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01089:02364
Extra
PDB:
ATOM 1 O3' C A1088 42.694 104.014 122.824 1.00 64.26 O
ATOM 2 P U A1089 43.918 104.752 123.548 1.00 68.55 P
ATOM 3 OP1 U A1089 43.495 105.023 124.949 1.00 67.13 O
ATOM 4 OP2 U A1089 44.367 105.878 122.676 1.00 68.80 O
ATOM 5 O5' U A1089 45.070 103.658 123.566 1.00 71.07 O
ATOM 6 C5' U A1089 45.335 102.914 124.753 1.00 76.41 C
ATOM 7 C4' U A1089 46.037 101.629 124.414 1.00 79.86 C
ATOM 8 O4' U A1089 47.290 101.925 123.732 1.00 82.06 O
ATOM 9 C3' U A1089 46.454 100.839 125.640 1.00 80.79 C
ATOM 10 O3' U A1089 45.376 100.095 126.203 1.00 76.95 O
ATOM 11 C2' U A1089 47.638 100.035 125.116 1.00 82.24 C
ATOM 12 O2' U A1089 47.279 98.918 124.324 1.00 82.20 O
ATOM 13 C1' U A1089 48.327 101.091 124.245 1.00 83.45 C
ATOM 14 N1 U A1089 49.257 101.933 125.026 1.00 85.40 N
ATOM 15 C2 U A1089 50.420 101.342 125.512 1.00 86.29 C
ATOM 16 O2 U A1089 50.716 100.172 125.291 1.00 86.29 O
ATOM 17 N3 U A1089 51.223 102.173 126.265 1.00 87.03 N
ATOM 18 C4 U A1089 50.998 103.508 126.570 1.00 87.01 C
ATOM 19 O4 U A1089 51.806 104.117 127.282 1.00 86.11 O
ATOM 20 C5 U A1089 49.790 104.048 126.018 1.00 86.82 C
ATOM 21 C6 U A1089 48.982 103.268 125.287 1.00 86.41 C
ATOM 22 P G A1090 45.009 100.291 127.760 1.00 75.07 P
ATOM 23 OP1 G A1090 43.707 99.604 127.967 1.00 75.25 O
ATOM 24 OP2 G A1090 45.158 101.725 128.133 1.00 74.07 O
ATOM 25 O5' G A1090 46.154 99.495 128.526 1.00 70.64 O
TER
ATOM 1 O3' G B2363 55.917 99.867 127.971 1.00 48.27 O
ATOM 2 P U B2364 55.636 100.725 126.641 1.00 47.48 P
ATOM 3 OP1 U B2364 54.155 100.735 126.482 1.00 45.84 O
ATOM 4 OP2 U B2364 56.499 100.229 125.533 1.00 45.94 O
ATOM 5 O5' U B2364 56.109 102.193 127.035 1.00 46.64 O
ATOM 6 C5' U B2364 55.346 102.977 127.970 1.00 46.21 C
ATOM 7 C4' U B2364 56.077 104.250 128.302 1.00 45.93 C
ATOM 8 O4' U B2364 57.337 103.930 128.948 1.00 45.71 O
ATOM 9 C3' U B2364 56.493 105.093 127.110 1.00 45.64 C
ATOM 10 O3' U B2364 55.434 105.889 126.609 1.00 47.30 O
ATOM 11 C2' U B2364 57.610 105.926 127.708 1.00 45.60 C
ATOM 12 O2' U B2364 57.109 106.943 128.554 1.00 44.09 O
ATOM 13 C1' U B2364 58.324 104.872 128.554 1.00 45.10 C
ATOM 14 N1 U B2364 59.371 104.166 127.796 1.00 44.33 N
ATOM 15 C2 U B2364 60.577 104.818 127.586 1.00 45.46 C
ATOM 16 O2 U B2364 60.795 105.956 127.956 1.00 47.34 O
ATOM 17 N3 U B2364 61.520 104.092 126.914 1.00 45.52 N
ATOM 18 C4 U B2364 61.389 102.823 126.426 1.00 45.55 C
ATOM 19 O4 U B2364 62.355 102.287 125.886 1.00 47.33 O
ATOM 20 C5 U B2364 60.110 102.225 126.652 1.00 45.58 C
ATOM 21 C6 U B2364 59.170 102.899 127.315 1.00 43.80 C
ATOM 22 P G B2365 55.429 106.329 125.062 1.00 47.87 P
ATOM 23 OP1 G B2365 54.103 106.950 124.805 1.00 46.44 O
ATOM 24 OP2 G B2365 55.888 105.183 124.228 1.00 46.28 O
ATOM 25 O5' G B2365 56.539 107.462 124.967 1.00 45.02 O
TER
ATOM 2 P U A1089 43.918 104.752 123.548 1.00 68.55 P
ATOM 3 OP1 U A1089 43.495 105.023 124.949 1.00 67.13 O
ATOM 4 OP2 U A1089 44.367 105.878 122.676 1.00 68.80 O
ATOM 5 O5' U A1089 45.070 103.658 123.566 1.00 71.07 O
ATOM 6 C5' U A1089 45.335 102.914 124.753 1.00 76.41 C
ATOM 7 C4' U A1089 46.037 101.629 124.414 1.00 79.86 C
ATOM 8 O4' U A1089 47.290 101.925 123.732 1.00 82.06 O
ATOM 9 C3' U A1089 46.454 100.839 125.640 1.00 80.79 C
ATOM 10 O3' U A1089 45.376 100.095 126.203 1.00 76.95 O
ATOM 11 C2' U A1089 47.638 100.035 125.116 1.00 82.24 C
ATOM 12 O2' U A1089 47.279 98.918 124.324 1.00 82.20 O
ATOM 13 C1' U A1089 48.327 101.091 124.245 1.00 83.45 C
ATOM 14 N1 U A1089 49.257 101.933 125.026 1.00 85.40 N
ATOM 15 C2 U A1089 50.420 101.342 125.512 1.00 86.29 C
ATOM 16 O2 U A1089 50.716 100.172 125.291 1.00 86.29 O
ATOM 17 N3 U A1089 51.223 102.173 126.265 1.00 87.03 N
ATOM 18 C4 U A1089 50.998 103.508 126.570 1.00 87.01 C
ATOM 19 O4 U A1089 51.806 104.117 127.282 1.00 86.11 O
ATOM 20 C5 U A1089 49.790 104.048 126.018 1.00 86.82 C
ATOM 21 C6 U A1089 48.982 103.268 125.287 1.00 86.41 C
ATOM 22 P G A1090 45.009 100.291 127.760 1.00 75.07 P
ATOM 23 OP1 G A1090 43.707 99.604 127.967 1.00 75.25 O
ATOM 24 OP2 G A1090 45.158 101.725 128.133 1.00 74.07 O
ATOM 25 O5' G A1090 46.154 99.495 128.526 1.00 70.64 O
TER
ATOM 1 O3' G B2363 55.917 99.867 127.971 1.00 48.27 O
ATOM 2 P U B2364 55.636 100.725 126.641 1.00 47.48 P
ATOM 3 OP1 U B2364 54.155 100.735 126.482 1.00 45.84 O
ATOM 4 OP2 U B2364 56.499 100.229 125.533 1.00 45.94 O
ATOM 5 O5' U B2364 56.109 102.193 127.035 1.00 46.64 O
ATOM 6 C5' U B2364 55.346 102.977 127.970 1.00 46.21 C
ATOM 7 C4' U B2364 56.077 104.250 128.302 1.00 45.93 C
ATOM 8 O4' U B2364 57.337 103.930 128.948 1.00 45.71 O
ATOM 9 C3' U B2364 56.493 105.093 127.110 1.00 45.64 C
ATOM 10 O3' U B2364 55.434 105.889 126.609 1.00 47.30 O
ATOM 11 C2' U B2364 57.610 105.926 127.708 1.00 45.60 C
ATOM 12 O2' U B2364 57.109 106.943 128.554 1.00 44.09 O
ATOM 13 C1' U B2364 58.324 104.872 128.554 1.00 45.10 C
ATOM 14 N1 U B2364 59.371 104.166 127.796 1.00 44.33 N
ATOM 15 C2 U B2364 60.577 104.818 127.586 1.00 45.46 C
ATOM 16 O2 U B2364 60.795 105.956 127.956 1.00 47.34 O
ATOM 17 N3 U B2364 61.520 104.092 126.914 1.00 45.52 N
ATOM 18 C4 U B2364 61.389 102.823 126.426 1.00 45.55 C
ATOM 19 O4 U B2364 62.355 102.287 125.886 1.00 47.33 O
ATOM 20 C5 U B2364 60.110 102.225 126.652 1.00 45.58 C
ATOM 21 C6 U B2364 59.170 102.899 127.315 1.00 43.80 C
ATOM 22 P G B2365 55.429 106.329 125.062 1.00 47.87 P
ATOM 23 OP1 G B2365 54.103 106.950 124.805 1.00 46.44 O
ATOM 24 OP2 G B2365 55.888 105.183 124.228 1.00 46.28 O
ATOM 25 O5' G B2365 56.539 107.462 124.967 1.00 45.02 O
TER
Atoms:
C4: (50.998,103.508,126.570)
N3: (51.223,102.173,126.265)
OP1: (43.495,105.023,124.949)
OP2: (44.367,105.878,122.676)
C2: (50.420,101.342,125.512)
C1': (48.327,101.091,124.245)
C3': (46.454,100.839,125.640)
O5': (45.070,103.658,123.566)
O4': (47.290,101.925,123.732)
C5': (45.335,102.914,124.753)
P: (43.918,104.752,123.548)
C4': (46.037,101.629,124.414)
C2': (47.638,100.035,125.116)
O2': (47.279,98.918,124.324)
N1: (49.257,101.933,125.026)
O4: (51.806,104.117,127.282)
O2: (50.716,100.172,125.291)
C6: (48.982,103.268,125.287)
C5: (49.790,104.048,126.018)
O3': (45.376,100.095,126.203)
N3: (51.223,102.173,126.265)
OP1: (43.495,105.023,124.949)
OP2: (44.367,105.878,122.676)
C2: (50.420,101.342,125.512)
C1': (48.327,101.091,124.245)
C3': (46.454,100.839,125.640)
O5': (45.070,103.658,123.566)
O4': (47.290,101.925,123.732)
C5': (45.335,102.914,124.753)
P: (43.918,104.752,123.548)
C4': (46.037,101.629,124.414)
C2': (47.638,100.035,125.116)
O2': (47.279,98.918,124.324)
N1: (49.257,101.933,125.026)
O4: (51.806,104.117,127.282)
O2: (50.716,100.172,125.291)
C6: (48.982,103.268,125.287)
C5: (49.790,104.048,126.018)
O3': (45.376,100.095,126.203)
C4: (61.389,102.823,126.426)
N3: (61.520,104.092,126.914)
OP1: (54.155,100.735,126.482)
OP2: (56.499,100.229,125.533)
C2: (60.577,104.818,127.586)
C1': (58.324,104.872,128.554)
C3': (56.493,105.093,127.110)
O5': (56.109,102.193,127.035)
O4': (57.337,103.930,128.948)
C5': (55.346,102.977,127.970)
P: (55.636,100.725,126.641)
C4': (56.077,104.250,128.302)
C2': (57.610,105.926,127.708)
O2': (57.109,106.943,128.554)
N1: (59.371,104.166,127.796)
O4: (62.355,102.287,125.886)
O2: (60.795,105.956,127.956)
C6: (59.170,102.899,127.315)
C5: (60.110,102.225,126.652)
O3': (55.434,105.889,126.609)
N3: (61.520,104.092,126.914)
OP1: (54.155,100.735,126.482)
OP2: (56.499,100.229,125.533)
C2: (60.577,104.818,127.586)
C1': (58.324,104.872,128.554)
C3': (56.493,105.093,127.110)
O5': (56.109,102.193,127.035)
O4': (57.337,103.930,128.948)
C5': (55.346,102.977,127.970)
P: (55.636,100.725,126.641)
C4': (56.077,104.250,128.302)
C2': (57.610,105.926,127.708)
O2': (57.109,106.943,128.554)
N1: (59.371,104.166,127.796)
O4: (62.355,102.287,125.886)
O2: (60.795,105.956,127.956)
C6: (59.170,102.899,127.315)
C5: (60.110,102.225,126.652)
O3': (55.434,105.889,126.609)
Image (generated by PyMOL):