Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01949:01923
Extra
PDB:
ATOM 1 O3' C A1948 112.998 117.808 118.455 1.00 62.38 O
ATOM 2 P U A1949 113.329 116.950 117.144 1.00 63.11 P
ATOM 3 OP1 U A1949 114.072 115.741 117.565 1.00 62.64 O
ATOM 4 OP2 U A1949 113.927 117.875 116.149 1.00 62.93 O
ATOM 5 O5' U A1949 111.903 116.480 116.613 1.00 66.76 O
ATOM 6 C5' U A1949 111.131 115.496 117.332 1.00 70.79 C
ATOM 7 C4' U A1949 109.857 115.177 116.584 1.00 73.15 C
ATOM 8 O4' U A1949 109.026 116.365 116.500 1.00 74.99 O
ATOM 9 C3' U A1949 110.029 114.765 115.134 1.00 73.99 C
ATOM 10 O3' U A1949 110.391 113.407 115.007 1.00 77.00 O
ATOM 11 C2' U A1949 108.656 115.059 114.556 1.00 74.07 C
ATOM 12 O2' U A1949 107.704 114.071 114.897 1.00 71.83 O
ATOM 13 C1' U A1949 108.320 116.371 115.267 1.00 74.28 C
ATOM 14 N1 U A1949 108.718 117.571 114.507 1.00 73.94 N
ATOM 15 C2 U A1949 107.715 118.364 113.961 1.00 73.55 C
ATOM 16 O2 U A1949 106.528 118.116 114.074 1.00 73.66 O
ATOM 17 N3 U A1949 108.159 119.463 113.273 1.00 74.13 N
ATOM 18 C4 U A1949 109.468 119.847 113.072 1.00 74.87 C
ATOM 19 O4 U A1949 109.708 120.873 112.427 1.00 75.53 O
ATOM 20 C5 U A1949 110.441 118.978 113.660 1.00 74.23 C
ATOM 21 C6 U A1949 110.045 117.901 114.339 1.00 73.22 C
ATOM 22 P U A1950 110.877 112.847 113.585 1.00 79.26 P
ATOM 23 OP1 U A1950 111.719 111.651 113.832 1.00 79.71 O
ATOM 24 OP2 U A1950 111.435 113.981 112.808 1.00 78.73 O
ATOM 25 O5' U A1950 109.524 112.370 112.892 1.00 82.05 O
TER
ATOM 1 O3' G B1922 105.905 122.066 110.366 1.00 55.14 O
ATOM 2 P U B1923 105.358 121.934 111.871 1.00 57.70 P
ATOM 3 OP1 U B1923 104.389 123.036 112.120 1.00 56.51 O
ATOM 4 OP2 U B1923 106.540 121.784 112.763 1.00 60.16 O
ATOM 5 O5' U B1923 104.548 120.561 111.881 1.00 56.13 O
ATOM 6 C5' U B1923 103.727 120.184 110.759 1.00 54.94 C
ATOM 7 C4' U B1923 102.282 120.006 111.174 1.00 52.45 C
ATOM 8 O4' U B1923 102.093 118.721 111.822 1.00 50.95 O
ATOM 9 C3' U B1923 101.674 121.058 112.096 1.00 51.46 C
ATOM 10 O3' U B1923 100.348 121.330 111.677 1.00 52.32 O
ATOM 11 C2' U B1923 101.656 120.345 113.447 1.00 52.14 C
ATOM 12 O2' U B1923 100.630 120.789 114.313 1.00 52.50 O
ATOM 13 C1' U B1923 101.388 118.903 113.028 1.00 51.78 C
ATOM 14 N1 U B1923 101.843 117.892 113.995 1.00 53.57 N
ATOM 15 C2 U B1923 100.879 117.109 114.608 1.00 54.95 C
ATOM 16 O2 U B1923 99.683 117.232 114.396 1.00 56.37 O
ATOM 17 N3 U B1923 101.364 116.173 115.484 1.00 55.52 N
ATOM 18 C4 U B1923 102.683 115.942 115.808 1.00 56.31 C
ATOM 19 O4 U B1923 102.962 115.024 116.588 1.00 58.19 O
ATOM 20 C5 U B1923 103.620 116.797 115.144 1.00 54.97 C
ATOM 21 C6 U B1923 103.180 117.717 114.282 1.00 54.04 C
ATOM 22 P A B1924 99.958 122.805 111.167 1.00 53.27 P
ATOM 23 OP1 A B1924 100.412 123.772 112.203 1.00 53.52 O
ATOM 24 OP2 A B1924 98.527 122.788 110.760 1.00 54.40 O
ATOM 25 O5' A B1924 100.837 123.011 109.853 1.00 51.41 O
TER
ATOM 2 P U A1949 113.329 116.950 117.144 1.00 63.11 P
ATOM 3 OP1 U A1949 114.072 115.741 117.565 1.00 62.64 O
ATOM 4 OP2 U A1949 113.927 117.875 116.149 1.00 62.93 O
ATOM 5 O5' U A1949 111.903 116.480 116.613 1.00 66.76 O
ATOM 6 C5' U A1949 111.131 115.496 117.332 1.00 70.79 C
ATOM 7 C4' U A1949 109.857 115.177 116.584 1.00 73.15 C
ATOM 8 O4' U A1949 109.026 116.365 116.500 1.00 74.99 O
ATOM 9 C3' U A1949 110.029 114.765 115.134 1.00 73.99 C
ATOM 10 O3' U A1949 110.391 113.407 115.007 1.00 77.00 O
ATOM 11 C2' U A1949 108.656 115.059 114.556 1.00 74.07 C
ATOM 12 O2' U A1949 107.704 114.071 114.897 1.00 71.83 O
ATOM 13 C1' U A1949 108.320 116.371 115.267 1.00 74.28 C
ATOM 14 N1 U A1949 108.718 117.571 114.507 1.00 73.94 N
ATOM 15 C2 U A1949 107.715 118.364 113.961 1.00 73.55 C
ATOM 16 O2 U A1949 106.528 118.116 114.074 1.00 73.66 O
ATOM 17 N3 U A1949 108.159 119.463 113.273 1.00 74.13 N
ATOM 18 C4 U A1949 109.468 119.847 113.072 1.00 74.87 C
ATOM 19 O4 U A1949 109.708 120.873 112.427 1.00 75.53 O
ATOM 20 C5 U A1949 110.441 118.978 113.660 1.00 74.23 C
ATOM 21 C6 U A1949 110.045 117.901 114.339 1.00 73.22 C
ATOM 22 P U A1950 110.877 112.847 113.585 1.00 79.26 P
ATOM 23 OP1 U A1950 111.719 111.651 113.832 1.00 79.71 O
ATOM 24 OP2 U A1950 111.435 113.981 112.808 1.00 78.73 O
ATOM 25 O5' U A1950 109.524 112.370 112.892 1.00 82.05 O
TER
ATOM 1 O3' G B1922 105.905 122.066 110.366 1.00 55.14 O
ATOM 2 P U B1923 105.358 121.934 111.871 1.00 57.70 P
ATOM 3 OP1 U B1923 104.389 123.036 112.120 1.00 56.51 O
ATOM 4 OP2 U B1923 106.540 121.784 112.763 1.00 60.16 O
ATOM 5 O5' U B1923 104.548 120.561 111.881 1.00 56.13 O
ATOM 6 C5' U B1923 103.727 120.184 110.759 1.00 54.94 C
ATOM 7 C4' U B1923 102.282 120.006 111.174 1.00 52.45 C
ATOM 8 O4' U B1923 102.093 118.721 111.822 1.00 50.95 O
ATOM 9 C3' U B1923 101.674 121.058 112.096 1.00 51.46 C
ATOM 10 O3' U B1923 100.348 121.330 111.677 1.00 52.32 O
ATOM 11 C2' U B1923 101.656 120.345 113.447 1.00 52.14 C
ATOM 12 O2' U B1923 100.630 120.789 114.313 1.00 52.50 O
ATOM 13 C1' U B1923 101.388 118.903 113.028 1.00 51.78 C
ATOM 14 N1 U B1923 101.843 117.892 113.995 1.00 53.57 N
ATOM 15 C2 U B1923 100.879 117.109 114.608 1.00 54.95 C
ATOM 16 O2 U B1923 99.683 117.232 114.396 1.00 56.37 O
ATOM 17 N3 U B1923 101.364 116.173 115.484 1.00 55.52 N
ATOM 18 C4 U B1923 102.683 115.942 115.808 1.00 56.31 C
ATOM 19 O4 U B1923 102.962 115.024 116.588 1.00 58.19 O
ATOM 20 C5 U B1923 103.620 116.797 115.144 1.00 54.97 C
ATOM 21 C6 U B1923 103.180 117.717 114.282 1.00 54.04 C
ATOM 22 P A B1924 99.958 122.805 111.167 1.00 53.27 P
ATOM 23 OP1 A B1924 100.412 123.772 112.203 1.00 53.52 O
ATOM 24 OP2 A B1924 98.527 122.788 110.760 1.00 54.40 O
ATOM 25 O5' A B1924 100.837 123.011 109.853 1.00 51.41 O
TER
Atoms:
C4: (109.468,119.847,113.072)
N3: (108.159,119.463,113.273)
OP1: (114.072,115.741,117.565)
OP2: (113.927,117.875,116.149)
C2: (107.715,118.364,113.961)
C1': (108.320,116.371,115.267)
C3': (110.029,114.765,115.134)
O5': (111.903,116.480,116.613)
O4': (109.026,116.365,116.500)
C5': (111.131,115.496,117.332)
P: (113.329,116.950,117.144)
C4': (109.857,115.177,116.584)
C2': (108.656,115.059,114.556)
O2': (107.704,114.071,114.897)
N1: (108.718,117.571,114.507)
O4: (109.708,120.873,112.427)
O2: (106.528,118.116,114.074)
C6: (110.045,117.901,114.339)
C5: (110.441,118.978,113.660)
O3': (110.391,113.407,115.007)
N3: (108.159,119.463,113.273)
OP1: (114.072,115.741,117.565)
OP2: (113.927,117.875,116.149)
C2: (107.715,118.364,113.961)
C1': (108.320,116.371,115.267)
C3': (110.029,114.765,115.134)
O5': (111.903,116.480,116.613)
O4': (109.026,116.365,116.500)
C5': (111.131,115.496,117.332)
P: (113.329,116.950,117.144)
C4': (109.857,115.177,116.584)
C2': (108.656,115.059,114.556)
O2': (107.704,114.071,114.897)
N1: (108.718,117.571,114.507)
O4: (109.708,120.873,112.427)
O2: (106.528,118.116,114.074)
C6: (110.045,117.901,114.339)
C5: (110.441,118.978,113.660)
O3': (110.391,113.407,115.007)
C4: (102.683,115.942,115.808)
N3: (101.364,116.173,115.484)
OP1: (104.389,123.036,112.120)
OP2: (106.540,121.784,112.763)
C2: (100.879,117.109,114.608)
C1': (101.388,118.903,113.028)
C3': (101.674,121.058,112.096)
O5': (104.548,120.561,111.881)
O4': (102.093,118.721,111.822)
C5': (103.727,120.184,110.759)
P: (105.358,121.934,111.871)
C4': (102.282,120.006,111.174)
C2': (101.656,120.345,113.447)
O2': (100.630,120.789,114.313)
N1: (101.843,117.892,113.995)
O4: (102.962,115.024,116.588)
O2: (99.683,117.232,114.396)
C6: (103.180,117.717,114.282)
C5: (103.620,116.797,115.144)
O3': (100.348,121.330,111.677)
N3: (101.364,116.173,115.484)
OP1: (104.389,123.036,112.120)
OP2: (106.540,121.784,112.763)
C2: (100.879,117.109,114.608)
C1': (101.388,118.903,113.028)
C3': (101.674,121.058,112.096)
O5': (104.548,120.561,111.881)
O4': (102.093,118.721,111.822)
C5': (103.727,120.184,110.759)
P: (105.358,121.934,111.871)
C4': (102.282,120.006,111.174)
C2': (101.656,120.345,113.447)
O2': (100.630,120.789,114.313)
N1: (101.843,117.892,113.995)
O4: (102.962,115.024,116.588)
O2: (99.683,117.232,114.396)
C6: (103.180,117.717,114.282)
C5: (103.620,116.797,115.144)
O3': (100.348,121.330,111.677)
Image (generated by PyMOL):