ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2CKY:B55:B58

Extra

PDB:
ATOM 1 O3' G A 54 19.791 -17.423 -99.448 1.00 48.82 O
ATOM 2 P U A 55 20.757 -18.658 -99.239 1.00 49.74 P
ATOM 3 OP1 U A 55 22.020 -18.264 -98.575 1.00 51.88 O
ATOM 4 OP2 U A 55 20.851 -19.374-100.526 1.00 50.86 O
ATOM 5 O5' U A 55 19.855 -19.445 -98.188 1.00 48.28 O
ATOM 6 C5' U A 55 19.677 -18.932 -96.852 1.00 46.52 C
ATOM 7 C4' U A 55 18.722 -19.811 -96.061 1.00 44.45 C
ATOM 8 O4' U A 55 17.480 -19.906 -96.784 1.00 43.18 O
ATOM 9 C3' U A 55 19.102 -21.266 -95.945 1.00 45.17 C
ATOM 10 O3' U A 55 20.095 -21.443 -94.945 1.00 47.33 O
ATOM 11 C2' U A 55 17.765 -21.896 -95.593 1.00 43.32 C
ATOM 12 O2' U A 55 17.372 -21.708 -94.253 1.00 43.72 O
ATOM 13 C1' U A 55 16.834 -21.120 -96.503 1.00 40.88 C
ATOM 14 N1 U A 55 16.520 -21.824 -97.765 1.00 40.00 N
ATOM 15 C2 U A 55 15.632 -22.877 -97.690 1.00 38.96 C
ATOM 16 O2 U A 55 15.130 -23.224 -96.641 1.00 37.66 O
ATOM 17 N3 U A 55 15.362 -23.525 -98.867 1.00 38.72 N
ATOM 18 C4 U A 55 15.883 -23.180-100.094 1.00 40.46 C
ATOM 19 O4 U A 55 15.560 -23.824-101.078 1.00 41.44 O
ATOM 20 C5 U A 55 16.802 -22.071-100.103 1.00 40.90 C
ATOM 21 C6 U A 55 17.087 -21.441 -98.959 1.00 40.17 C
ATOM 22 P A A 56 21.233 -22.540 -95.175 1.00 49.06 P
ATOM 23 OP1 A A 56 22.398 -22.175 -94.331 1.00 49.63 O
ATOM 24 OP2 A A 56 21.395 -22.692 -96.640 1.00 50.23 O
ATOM 25 O5' A A 56 20.555 -23.866 -94.584 1.00 46.27 O
TER

ATOM 1 O3' A B 57 12.759 -26.853 -97.552 1.00 37.66 O
ATOM 2 P U B 58 12.131 -25.913 -98.658 1.00 39.19 P
ATOM 3 OP1 U B 58 11.685 -26.767 -99.786 1.00 41.59 O
ATOM 4 OP2 U B 58 13.049 -24.773 -98.889 1.00 38.51 O
ATOM 5 O5' U B 58 10.810 -25.355 -97.958 1.00 39.07 O
ATOM 6 C5' U B 58 9.784 -26.171 -97.447 1.00 39.08 C
ATOM 7 C4' U B 58 8.932 -25.321 -96.516 1.00 39.29 C
ATOM 8 O4' U B 58 9.610 -24.953 -95.281 1.00 38.81 O
ATOM 9 C3' U B 58 8.542 -23.953 -97.034 1.00 38.69 C
ATOM 10 O3' U B 58 7.573 -24.073 -98.061 1.00 40.27 O
ATOM 11 C2' U B 58 7.994 -23.377 -95.734 1.00 37.54 C
ATOM 12 O2' U B 58 6.784 -23.998 -95.355 1.00 36.85 O
ATOM 13 C1' U B 58 9.057 -23.767 -94.725 1.00 37.49 C
ATOM 14 N1 U B 58 10.211 -22.814 -94.390 1.00 37.77 N
ATOM 15 C2 U B 58 10.214 -22.045 -93.210 1.00 37.56 C
ATOM 16 O2 U B 58 9.331 -21.995 -92.372 1.00 37.09 O
ATOM 17 N3 U B 58 11.319 -21.270 -93.004 1.00 37.16 N
ATOM 18 C4 U B 58 12.422 -21.174 -93.812 1.00 37.86 C
ATOM 19 O4 U B 58 13.327 -20.421 -93.464 1.00 37.77 O
ATOM 20 C5 U B 58 12.376 -22.000 -94.997 1.00 38.50 C
ATOM 21 C6 U B 58 11.304 -22.772 -95.235 1.00 37.61 C
ATOM 22 P G B 59 7.391 -22.905 -99.127 1.00 51.32 P
ATOM 23 OP1 G B 59 6.328 -23.306-100.078 1.00 51.04 O
ATOM 24 OP2 G B 59 8.770 -22.584 -99.581 1.00 50.49 O
ATOM 25 O5' G B 59 6.784 -21.681 -98.267 1.00 51.40 O
TER

Atoms:
C4: (15.883,-23.180,-100.094)
N3: (15.362,-23.525,-98.867)
OP1: (22.020,-18.264,-98.575)
OP2: (20.851,-19.374,-100.526)
C2: (15.632,-22.877,-97.690)
C1': (16.834,-21.120,-96.503)
C3': (19.102,-21.266,-95.945)
O5': (19.855,-19.445,-98.188)
O4': (17.480,-19.906,-96.784)
C5': (19.677,-18.932,-96.852)
P: (20.757,-18.658,-99.239)
C4': (18.722,-19.811,-96.061)
C2': (17.765,-21.896,-95.593)
O2': (17.372,-21.708,-94.253)
N1: (16.520,-21.824,-97.765)
O4: (15.560,-23.824,-101.078)
O2: (15.130,-23.224,-96.641)
C6: (17.087,-21.441,-98.959)
C5: (16.802,-22.071,-100.103)
O3': (20.095,-21.443,-94.945)
C4: (12.422,-21.174,-93.812)
N3: (11.319,-21.270,-93.004)
OP1: (11.685,-26.767,-99.786)
OP2: (13.049,-24.773,-98.889)
C2: (10.214,-22.045,-93.210)
C1': (9.057,-23.767,-94.725)
C3': (8.542,-23.953,-97.034)
O5': (10.810,-25.355,-97.958)
O4': (9.610,-24.953,-95.281)
C5': (9.784,-26.171,-97.447)
P: (12.131,-25.913,-98.658)
C4': (8.932,-25.321,-96.516)
C2': (7.994,-23.377,-95.734)
O2': (6.784,-23.998,-95.355)
N1: (10.211,-22.814,-94.390)
O4: (13.327,-20.421,-93.464)
O2: (9.331,-21.995,-92.372)
C6: (11.304,-22.772,-95.235)
C5: (12.376,-22.000,-94.997)
O3': (7.573,-24.073,-98.061)
Image (generated by PyMOL):
PyMOL image
show in jmol