Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:X58:X61
Extra
PDB:
ATOM 1 O3' A A 57 -13.286 -29.796 10.186 1.00 35.34 O
ATOM 2 P U A 58 -12.435 -29.672 11.535 1.00 34.88 P
ATOM 3 OP1 U A 58 -11.284 -30.597 11.430 1.00 34.56 O
ATOM 4 OP2 U A 58 -13.364 -29.769 12.682 1.00 34.69 O
ATOM 5 O5' U A 58 -11.905 -28.165 11.465 1.00 35.09 O
ATOM 6 C5' U A 58 -10.926 -27.800 10.502 1.00 34.92 C
ATOM 7 C4' U A 58 -10.788 -26.291 10.447 1.00 34.46 C
ATOM 8 O4' U A 58 -12.103 -25.688 10.361 1.00 34.48 O
ATOM 9 C3' U A 58 -10.203 -25.657 11.697 1.00 34.45 C
ATOM 10 O3' U A 58 -8.785 -25.780 11.713 1.00 34.18 O
ATOM 11 C2' U A 58 -10.664 -24.211 11.535 1.00 33.76 C
ATOM 12 O2' U A 58 -9.834 -23.474 10.661 1.00 34.27 O
ATOM 13 C1' U A 58 -12.057 -24.390 10.928 1.00 33.34 C
ATOM 14 N1 U A 58 -13.143 -24.275 11.941 1.00 32.24 N
ATOM 15 C2 U A 58 -13.554 -23.020 12.344 1.00 31.52 C
ATOM 16 O2 U A 58 -13.085 -21.987 11.903 1.00 32.81 O
ATOM 17 N3 U A 58 -14.547 -23.015 13.287 1.00 30.48 N
ATOM 18 C4 U A 58 -15.155 -24.116 13.863 1.00 30.09 C
ATOM 19 O4 U A 58 -16.034 -23.950 14.698 1.00 28.61 O
ATOM 20 C5 U A 58 -14.670 -25.391 13.398 1.00 30.53 C
ATOM 21 C6 U A 58 -13.704 -25.420 12.474 1.00 31.59 C
ATOM 22 P A A 59 -8.067 -26.205 13.078 1.00 34.53 P
ATOM 23 OP1 A A 59 -6.663 -26.569 12.780 1.00 34.89 O
ATOM 24 OP2 A A 59 -8.948 -27.173 13.771 1.00 34.83 O
ATOM 25 O5' A A 59 -8.085 -24.839 13.907 1.00 32.41 O
TER
ATOM 1 O3' A B 60 -14.506 -18.708 14.775 1.00 28.19 O
ATOM 2 P U B 61 -15.884 -19.172 14.104 1.00 29.87 P
ATOM 3 OP1 U B 61 -16.964 -18.861 15.070 1.00 29.03 O
ATOM 4 OP2 U B 61 -15.745 -20.556 13.595 1.00 30.07 O
ATOM 5 O5' U B 61 -16.018 -18.172 12.862 1.00 29.24 O
ATOM 6 C5' U B 61 -16.260 -16.791 13.110 1.00 30.03 C
ATOM 7 C4' U B 61 -15.965 -15.955 11.878 1.00 31.16 C
ATOM 8 O4' U B 61 -14.591 -16.137 11.463 1.00 31.31 O
ATOM 9 C3' U B 61 -16.770 -16.326 10.644 1.00 31.97 C
ATOM 10 O3' U B 61 -18.057 -15.736 10.753 1.00 32.25 O
ATOM 11 C2' U B 61 -15.911 -15.696 9.547 1.00 31.77 C
ATOM 12 O2' U B 61 -16.122 -14.306 9.386 1.00 33.42 O
ATOM 13 C1' U B 61 -14.497 -15.961 10.063 1.00 31.57 C
ATOM 14 N1 U B 61 -13.875 -17.172 9.452 1.00 31.24 N
ATOM 15 C2 U B 61 -13.020 -17.017 8.378 1.00 31.52 C
ATOM 16 O2 U B 61 -12.722 -15.934 7.907 1.00 33.96 O
ATOM 17 N3 U B 61 -12.514 -18.186 7.870 1.00 30.79 N
ATOM 18 C4 U B 61 -12.766 -19.468 8.320 1.00 31.09 C
ATOM 19 O4 U B 61 -12.234 -20.418 7.757 1.00 33.56 O
ATOM 20 C5 U B 61 -13.668 -19.553 9.440 1.00 31.01 C
ATOM 21 C6 U B 61 -14.179 -18.426 9.951 1.00 30.69 C
ATOM 22 P G B 62 -19.327 -16.286 9.955 1.00 31.76 P
ATOM 23 OP1 G B 62 -20.480 -15.470 10.397 1.00 32.26 O
ATOM 24 OP2 G B 62 -19.382 -17.759 10.068 1.00 32.19 O
ATOM 25 O5' G B 62 -18.979 -15.914 8.441 1.00 32.08 O
TER
ATOM 2 P U A 58 -12.435 -29.672 11.535 1.00 34.88 P
ATOM 3 OP1 U A 58 -11.284 -30.597 11.430 1.00 34.56 O
ATOM 4 OP2 U A 58 -13.364 -29.769 12.682 1.00 34.69 O
ATOM 5 O5' U A 58 -11.905 -28.165 11.465 1.00 35.09 O
ATOM 6 C5' U A 58 -10.926 -27.800 10.502 1.00 34.92 C
ATOM 7 C4' U A 58 -10.788 -26.291 10.447 1.00 34.46 C
ATOM 8 O4' U A 58 -12.103 -25.688 10.361 1.00 34.48 O
ATOM 9 C3' U A 58 -10.203 -25.657 11.697 1.00 34.45 C
ATOM 10 O3' U A 58 -8.785 -25.780 11.713 1.00 34.18 O
ATOM 11 C2' U A 58 -10.664 -24.211 11.535 1.00 33.76 C
ATOM 12 O2' U A 58 -9.834 -23.474 10.661 1.00 34.27 O
ATOM 13 C1' U A 58 -12.057 -24.390 10.928 1.00 33.34 C
ATOM 14 N1 U A 58 -13.143 -24.275 11.941 1.00 32.24 N
ATOM 15 C2 U A 58 -13.554 -23.020 12.344 1.00 31.52 C
ATOM 16 O2 U A 58 -13.085 -21.987 11.903 1.00 32.81 O
ATOM 17 N3 U A 58 -14.547 -23.015 13.287 1.00 30.48 N
ATOM 18 C4 U A 58 -15.155 -24.116 13.863 1.00 30.09 C
ATOM 19 O4 U A 58 -16.034 -23.950 14.698 1.00 28.61 O
ATOM 20 C5 U A 58 -14.670 -25.391 13.398 1.00 30.53 C
ATOM 21 C6 U A 58 -13.704 -25.420 12.474 1.00 31.59 C
ATOM 22 P A A 59 -8.067 -26.205 13.078 1.00 34.53 P
ATOM 23 OP1 A A 59 -6.663 -26.569 12.780 1.00 34.89 O
ATOM 24 OP2 A A 59 -8.948 -27.173 13.771 1.00 34.83 O
ATOM 25 O5' A A 59 -8.085 -24.839 13.907 1.00 32.41 O
TER
ATOM 1 O3' A B 60 -14.506 -18.708 14.775 1.00 28.19 O
ATOM 2 P U B 61 -15.884 -19.172 14.104 1.00 29.87 P
ATOM 3 OP1 U B 61 -16.964 -18.861 15.070 1.00 29.03 O
ATOM 4 OP2 U B 61 -15.745 -20.556 13.595 1.00 30.07 O
ATOM 5 O5' U B 61 -16.018 -18.172 12.862 1.00 29.24 O
ATOM 6 C5' U B 61 -16.260 -16.791 13.110 1.00 30.03 C
ATOM 7 C4' U B 61 -15.965 -15.955 11.878 1.00 31.16 C
ATOM 8 O4' U B 61 -14.591 -16.137 11.463 1.00 31.31 O
ATOM 9 C3' U B 61 -16.770 -16.326 10.644 1.00 31.97 C
ATOM 10 O3' U B 61 -18.057 -15.736 10.753 1.00 32.25 O
ATOM 11 C2' U B 61 -15.911 -15.696 9.547 1.00 31.77 C
ATOM 12 O2' U B 61 -16.122 -14.306 9.386 1.00 33.42 O
ATOM 13 C1' U B 61 -14.497 -15.961 10.063 1.00 31.57 C
ATOM 14 N1 U B 61 -13.875 -17.172 9.452 1.00 31.24 N
ATOM 15 C2 U B 61 -13.020 -17.017 8.378 1.00 31.52 C
ATOM 16 O2 U B 61 -12.722 -15.934 7.907 1.00 33.96 O
ATOM 17 N3 U B 61 -12.514 -18.186 7.870 1.00 30.79 N
ATOM 18 C4 U B 61 -12.766 -19.468 8.320 1.00 31.09 C
ATOM 19 O4 U B 61 -12.234 -20.418 7.757 1.00 33.56 O
ATOM 20 C5 U B 61 -13.668 -19.553 9.440 1.00 31.01 C
ATOM 21 C6 U B 61 -14.179 -18.426 9.951 1.00 30.69 C
ATOM 22 P G B 62 -19.327 -16.286 9.955 1.00 31.76 P
ATOM 23 OP1 G B 62 -20.480 -15.470 10.397 1.00 32.26 O
ATOM 24 OP2 G B 62 -19.382 -17.759 10.068 1.00 32.19 O
ATOM 25 O5' G B 62 -18.979 -15.914 8.441 1.00 32.08 O
TER
Atoms:
C4: (-15.155,-24.116,13.863)
N3: (-14.547,-23.015,13.287)
OP1: (-11.284,-30.597,11.430)
OP2: (-13.364,-29.769,12.682)
C2: (-13.554,-23.020,12.344)
C1': (-12.057,-24.390,10.928)
C3': (-10.203,-25.657,11.697)
O5': (-11.905,-28.165,11.465)
O4': (-12.103,-25.688,10.361)
C5': (-10.926,-27.800,10.502)
P: (-12.435,-29.672,11.535)
C4': (-10.788,-26.291,10.447)
C2': (-10.664,-24.211,11.535)
O2': (-9.834,-23.474,10.661)
N1: (-13.143,-24.275,11.941)
O4: (-16.034,-23.950,14.698)
O2: (-13.085,-21.987,11.903)
C6: (-13.704,-25.420,12.474)
C5: (-14.670,-25.391,13.398)
O3': (-8.785,-25.780,11.713)
N3: (-14.547,-23.015,13.287)
OP1: (-11.284,-30.597,11.430)
OP2: (-13.364,-29.769,12.682)
C2: (-13.554,-23.020,12.344)
C1': (-12.057,-24.390,10.928)
C3': (-10.203,-25.657,11.697)
O5': (-11.905,-28.165,11.465)
O4': (-12.103,-25.688,10.361)
C5': (-10.926,-27.800,10.502)
P: (-12.435,-29.672,11.535)
C4': (-10.788,-26.291,10.447)
C2': (-10.664,-24.211,11.535)
O2': (-9.834,-23.474,10.661)
N1: (-13.143,-24.275,11.941)
O4: (-16.034,-23.950,14.698)
O2: (-13.085,-21.987,11.903)
C6: (-13.704,-25.420,12.474)
C5: (-14.670,-25.391,13.398)
O3': (-8.785,-25.780,11.713)
C4: (-12.766,-19.468,8.320)
N3: (-12.514,-18.186,7.870)
OP1: (-16.964,-18.861,15.070)
OP2: (-15.745,-20.556,13.595)
C2: (-13.020,-17.017,8.378)
C1': (-14.497,-15.961,10.063)
C3': (-16.770,-16.326,10.644)
O5': (-16.018,-18.172,12.862)
O4': (-14.591,-16.137,11.463)
C5': (-16.260,-16.791,13.110)
P: (-15.884,-19.172,14.104)
C4': (-15.965,-15.955,11.878)
C2': (-15.911,-15.696,9.547)
O2': (-16.122,-14.306,9.386)
N1: (-13.875,-17.172,9.452)
O4: (-12.234,-20.418,7.757)
O2: (-12.722,-15.934,7.907)
C6: (-14.179,-18.426,9.951)
C5: (-13.668,-19.553,9.440)
O3': (-18.057,-15.736,10.753)
N3: (-12.514,-18.186,7.870)
OP1: (-16.964,-18.861,15.070)
OP2: (-15.745,-20.556,13.595)
C2: (-13.020,-17.017,8.378)
C1': (-14.497,-15.961,10.063)
C3': (-16.770,-16.326,10.644)
O5': (-16.018,-18.172,12.862)
O4': (-14.591,-16.137,11.463)
C5': (-16.260,-16.791,13.110)
P: (-15.884,-19.172,14.104)
C4': (-15.965,-15.955,11.878)
C2': (-15.911,-15.696,9.547)
O2': (-16.122,-14.306,9.386)
N1: (-13.875,-17.172,9.452)
O4: (-12.234,-20.418,7.757)
O2: (-12.722,-15.934,7.907)
C6: (-14.179,-18.426,9.951)
C5: (-13.668,-19.553,9.440)
O3': (-18.057,-15.736,10.753)
Image (generated by PyMOL):