Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1340:A1343
Extra
PDB:
ATOM 1 O3' U A1339 -2.345 -62.154 17.051 1.00 39.47 O
ATOM 2 P U A1340 -3.116 -62.943 15.894 1.00 35.87 P
ATOM 3 OP1 U A1340 -2.149 -63.899 15.309 1.00 40.40 O
ATOM 4 OP2 U A1340 -3.830 -61.985 14.996 1.00 40.40 O
ATOM 5 O5' U A1340 -4.170 -63.785 16.730 1.00 52.76 O
ATOM 6 C5' U A1340 -3.759 -64.433 17.941 1.00 52.76 C
ATOM 7 C4' U A1340 -4.955 -64.757 18.794 1.00 52.76 C
ATOM 8 O4' U A1340 -5.483 -63.562 19.430 1.00 52.76 O
ATOM 9 C3' U A1340 -6.135 -65.377 18.064 1.00 52.76 C
ATOM 10 O3' U A1340 -5.935 -66.784 17.879 1.00 52.76 O
ATOM 11 C2' U A1340 -7.298 -65.058 19.006 1.00 52.76 C
ATOM 12 O2' U A1340 -7.400 -65.994 20.071 1.00 52.76 O
ATOM 13 C1' U A1340 -6.890 -63.690 19.575 1.00 52.76 C
ATOM 14 N1 U A1340 -7.539 -62.547 18.910 1.00 38.29 N
ATOM 15 C2 U A1340 -8.852 -62.247 19.235 1.00 38.12 C
ATOM 16 O2 U A1340 -9.504 -62.870 20.045 1.00 38.08 O
ATOM 17 N3 U A1340 -9.378 -61.175 18.569 1.00 38.08 N
ATOM 18 C4 U A1340 -8.745 -60.380 17.639 1.00 38.16 C
ATOM 19 O4 U A1340 -9.351 -59.432 17.142 1.00 38.28 O
ATOM 20 C5 U A1340 -7.401 -60.748 17.359 1.00 38.01 C
ATOM 21 C6 U A1340 -6.858 -61.794 17.986 1.00 38.08 C
ATOM 22 P A A1341 -6.357 -67.484 16.489 1.00 39.95 P
ATOM 23 OP1 A A1341 -6.021 -68.919 16.626 1.00 58.07 O
ATOM 24 OP2 A A1341 -5.806 -66.703 15.343 1.00 58.13 O
ATOM 25 O5' A A1341 -7.948 -67.373 16.476 1.00 18.45 O
TER
ATOM 1 O3' A B1342 -14.356 -61.911 19.387 1.00 9.40 O
ATOM 2 P U B1343 -13.530 -60.522 19.403 1.00 30.31 P
ATOM 3 OP1 U B1343 -14.461 -59.457 18.925 1.00 33.44 O
ATOM 4 OP2 U B1343 -12.228 -60.717 18.715 1.00 33.44 O
ATOM 5 O5' U B1343 -13.220 -60.296 20.948 1.00 26.75 O
ATOM 6 C5' U B1343 -14.294 -60.283 21.930 1.00 26.75 C
ATOM 7 C4' U B1343 -14.023 -59.231 22.981 1.00 26.75 C
ATOM 8 O4' U B1343 -12.864 -59.624 23.751 1.00 26.75 O
ATOM 9 C3' U B1343 -13.682 -57.877 22.382 1.00 26.75 C
ATOM 10 O3' U B1343 -14.855 -57.089 22.247 1.00 26.75 O
ATOM 11 C2' U B1343 -12.729 -57.279 23.397 1.00 26.75 C
ATOM 12 O2' U B1343 -13.454 -56.643 24.431 1.00 26.75 O
ATOM 13 C1' U B1343 -11.998 -58.527 23.908 1.00 26.75 C
ATOM 14 N1 U B1343 -10.740 -58.879 23.228 1.00 27.72 N
ATOM 15 C2 U B1343 -9.952 -59.847 23.825 1.00 27.72 C
ATOM 16 O2 U B1343 -10.266 -60.411 24.853 1.00 27.72 O
ATOM 17 N3 U B1343 -8.785 -60.141 23.170 1.00 27.72 N
ATOM 18 C4 U B1343 -8.330 -59.589 21.992 1.00 27.72 C
ATOM 19 O4 U B1343 -7.222 -59.919 21.552 1.00 27.72 O
ATOM 20 C5 U B1343 -9.203 -58.605 21.423 1.00 27.72 C
ATOM 21 C6 U B1343 -10.348 -58.290 22.046 1.00 27.72 C
ATOM 22 P A B1344 -14.832 -55.789 21.317 1.00 25.94 P
ATOM 23 OP1 A B1344 -16.203 -55.219 21.367 1.00 23.85 O
ATOM 24 OP2 A B1344 -14.244 -56.160 20.013 1.00 23.85 O
ATOM 25 O5' A B1344 -13.807 -54.832 22.066 1.00 26.06 O
TER
ATOM 2 P U A1340 -3.116 -62.943 15.894 1.00 35.87 P
ATOM 3 OP1 U A1340 -2.149 -63.899 15.309 1.00 40.40 O
ATOM 4 OP2 U A1340 -3.830 -61.985 14.996 1.00 40.40 O
ATOM 5 O5' U A1340 -4.170 -63.785 16.730 1.00 52.76 O
ATOM 6 C5' U A1340 -3.759 -64.433 17.941 1.00 52.76 C
ATOM 7 C4' U A1340 -4.955 -64.757 18.794 1.00 52.76 C
ATOM 8 O4' U A1340 -5.483 -63.562 19.430 1.00 52.76 O
ATOM 9 C3' U A1340 -6.135 -65.377 18.064 1.00 52.76 C
ATOM 10 O3' U A1340 -5.935 -66.784 17.879 1.00 52.76 O
ATOM 11 C2' U A1340 -7.298 -65.058 19.006 1.00 52.76 C
ATOM 12 O2' U A1340 -7.400 -65.994 20.071 1.00 52.76 O
ATOM 13 C1' U A1340 -6.890 -63.690 19.575 1.00 52.76 C
ATOM 14 N1 U A1340 -7.539 -62.547 18.910 1.00 38.29 N
ATOM 15 C2 U A1340 -8.852 -62.247 19.235 1.00 38.12 C
ATOM 16 O2 U A1340 -9.504 -62.870 20.045 1.00 38.08 O
ATOM 17 N3 U A1340 -9.378 -61.175 18.569 1.00 38.08 N
ATOM 18 C4 U A1340 -8.745 -60.380 17.639 1.00 38.16 C
ATOM 19 O4 U A1340 -9.351 -59.432 17.142 1.00 38.28 O
ATOM 20 C5 U A1340 -7.401 -60.748 17.359 1.00 38.01 C
ATOM 21 C6 U A1340 -6.858 -61.794 17.986 1.00 38.08 C
ATOM 22 P A A1341 -6.357 -67.484 16.489 1.00 39.95 P
ATOM 23 OP1 A A1341 -6.021 -68.919 16.626 1.00 58.07 O
ATOM 24 OP2 A A1341 -5.806 -66.703 15.343 1.00 58.13 O
ATOM 25 O5' A A1341 -7.948 -67.373 16.476 1.00 18.45 O
TER
ATOM 1 O3' A B1342 -14.356 -61.911 19.387 1.00 9.40 O
ATOM 2 P U B1343 -13.530 -60.522 19.403 1.00 30.31 P
ATOM 3 OP1 U B1343 -14.461 -59.457 18.925 1.00 33.44 O
ATOM 4 OP2 U B1343 -12.228 -60.717 18.715 1.00 33.44 O
ATOM 5 O5' U B1343 -13.220 -60.296 20.948 1.00 26.75 O
ATOM 6 C5' U B1343 -14.294 -60.283 21.930 1.00 26.75 C
ATOM 7 C4' U B1343 -14.023 -59.231 22.981 1.00 26.75 C
ATOM 8 O4' U B1343 -12.864 -59.624 23.751 1.00 26.75 O
ATOM 9 C3' U B1343 -13.682 -57.877 22.382 1.00 26.75 C
ATOM 10 O3' U B1343 -14.855 -57.089 22.247 1.00 26.75 O
ATOM 11 C2' U B1343 -12.729 -57.279 23.397 1.00 26.75 C
ATOM 12 O2' U B1343 -13.454 -56.643 24.431 1.00 26.75 O
ATOM 13 C1' U B1343 -11.998 -58.527 23.908 1.00 26.75 C
ATOM 14 N1 U B1343 -10.740 -58.879 23.228 1.00 27.72 N
ATOM 15 C2 U B1343 -9.952 -59.847 23.825 1.00 27.72 C
ATOM 16 O2 U B1343 -10.266 -60.411 24.853 1.00 27.72 O
ATOM 17 N3 U B1343 -8.785 -60.141 23.170 1.00 27.72 N
ATOM 18 C4 U B1343 -8.330 -59.589 21.992 1.00 27.72 C
ATOM 19 O4 U B1343 -7.222 -59.919 21.552 1.00 27.72 O
ATOM 20 C5 U B1343 -9.203 -58.605 21.423 1.00 27.72 C
ATOM 21 C6 U B1343 -10.348 -58.290 22.046 1.00 27.72 C
ATOM 22 P A B1344 -14.832 -55.789 21.317 1.00 25.94 P
ATOM 23 OP1 A B1344 -16.203 -55.219 21.367 1.00 23.85 O
ATOM 24 OP2 A B1344 -14.244 -56.160 20.013 1.00 23.85 O
ATOM 25 O5' A B1344 -13.807 -54.832 22.066 1.00 26.06 O
TER
Atoms:
C4: (-8.745,-60.380,17.639)
N3: (-9.378,-61.175,18.569)
OP1: (-2.149,-63.899,15.309)
OP2: (-3.830,-61.985,14.996)
C2: (-8.852,-62.247,19.235)
C1': (-6.890,-63.690,19.575)
C3': (-6.135,-65.377,18.064)
O5': (-4.170,-63.785,16.730)
O4': (-5.483,-63.562,19.430)
C5': (-3.759,-64.433,17.941)
P: (-3.116,-62.943,15.894)
C4': (-4.955,-64.757,18.794)
C2': (-7.298,-65.058,19.006)
O2': (-7.400,-65.994,20.071)
N1: (-7.539,-62.547,18.910)
O4: (-9.351,-59.432,17.142)
O2: (-9.504,-62.870,20.045)
C6: (-6.858,-61.794,17.986)
C5: (-7.401,-60.748,17.359)
O3': (-5.935,-66.784,17.879)
N3: (-9.378,-61.175,18.569)
OP1: (-2.149,-63.899,15.309)
OP2: (-3.830,-61.985,14.996)
C2: (-8.852,-62.247,19.235)
C1': (-6.890,-63.690,19.575)
C3': (-6.135,-65.377,18.064)
O5': (-4.170,-63.785,16.730)
O4': (-5.483,-63.562,19.430)
C5': (-3.759,-64.433,17.941)
P: (-3.116,-62.943,15.894)
C4': (-4.955,-64.757,18.794)
C2': (-7.298,-65.058,19.006)
O2': (-7.400,-65.994,20.071)
N1: (-7.539,-62.547,18.910)
O4: (-9.351,-59.432,17.142)
O2: (-9.504,-62.870,20.045)
C6: (-6.858,-61.794,17.986)
C5: (-7.401,-60.748,17.359)
O3': (-5.935,-66.784,17.879)
C4: (-8.330,-59.589,21.992)
N3: (-8.785,-60.141,23.170)
OP1: (-14.461,-59.457,18.925)
OP2: (-12.228,-60.717,18.715)
C2: (-9.952,-59.847,23.825)
C1': (-11.998,-58.527,23.908)
C3': (-13.682,-57.877,22.382)
O5': (-13.220,-60.296,20.948)
O4': (-12.864,-59.624,23.751)
C5': (-14.294,-60.283,21.930)
P: (-13.530,-60.522,19.403)
C4': (-14.023,-59.231,22.981)
C2': (-12.729,-57.279,23.397)
O2': (-13.454,-56.643,24.431)
N1: (-10.740,-58.879,23.228)
O4: (-7.222,-59.919,21.552)
O2: (-10.266,-60.411,24.853)
C6: (-10.348,-58.290,22.046)
C5: (-9.203,-58.605,21.423)
O3': (-14.855,-57.089,22.247)
N3: (-8.785,-60.141,23.170)
OP1: (-14.461,-59.457,18.925)
OP2: (-12.228,-60.717,18.715)
C2: (-9.952,-59.847,23.825)
C1': (-11.998,-58.527,23.908)
C3': (-13.682,-57.877,22.382)
O5': (-13.220,-60.296,20.948)
O4': (-12.864,-59.624,23.751)
C5': (-14.294,-60.283,21.930)
P: (-13.530,-60.522,19.403)
C4': (-14.023,-59.231,22.981)
C2': (-12.729,-57.279,23.397)
O2': (-13.454,-56.643,24.431)
N1: (-10.740,-58.879,23.228)
O4: (-7.222,-59.919,21.552)
O2: (-10.266,-60.411,24.853)
C6: (-10.348,-58.290,22.046)
C5: (-9.203,-58.605,21.423)
O3': (-14.855,-57.089,22.247)
Image (generated by PyMOL):