ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1018:A2331

Extra

PDB:
ATOM 1 O3' A A1017 54.628 99.121 110.450 1.00 40.33 O
ATOM 2 P G A1018 53.383 98.242 110.953 1.00 41.85 P
ATOM 3 OP1 G A1018 52.993 98.819 112.276 1.00 41.07 O
ATOM 4 OP2 G A1018 53.704 96.798 110.843 1.00 40.98 O
ATOM 5 O5' G A1018 52.248 98.538 109.881 1.00 42.70 O
ATOM 6 C5' G A1018 51.691 99.843 109.741 1.00 40.69 C
ATOM 7 C4' G A1018 51.826 100.298 108.315 1.00 39.95 C
ATOM 8 O4' G A1018 51.251 101.615 108.192 1.00 39.92 O
ATOM 9 C3' G A1018 53.250 100.411 107.783 1.00 39.71 C
ATOM 10 O3' G A1018 53.205 100.268 106.373 1.00 39.29 O
ATOM 11 C2' G A1018 53.574 101.866 108.061 1.00 39.99 C
ATOM 12 O2' G A1018 54.546 102.326 107.160 1.00 42.09 O
ATOM 13 C1' G A1018 52.232 102.511 107.735 1.00 40.66 C
ATOM 14 N9 G A1018 51.952 103.805 108.340 1.00 41.04 N
ATOM 15 C8 G A1018 52.547 104.392 109.422 1.00 42.03 C
ATOM 16 N7 G A1018 52.026 105.551 109.726 1.00 40.83 N
ATOM 17 C5 G A1018 51.035 105.736 108.784 1.00 41.23 C
ATOM 18 C6 G A1018 50.124 106.792 108.620 1.00 42.11 C
ATOM 19 O6 G A1018 50.024 107.831 109.284 1.00 41.99 O
ATOM 20 N1 G A1018 49.254 106.560 107.554 1.00 43.59 N
ATOM 21 C2 G A1018 49.269 105.448 106.746 1.00 44.39 C
ATOM 22 N2 G A1018 48.321 105.373 105.787 1.00 44.78 N
ATOM 23 N3 G A1018 50.145 104.467 106.878 1.00 43.52 N
ATOM 24 C4 G A1018 50.982 104.671 107.917 1.00 41.79 C
ATOM 25 P C A1019 54.066 99.133 105.638 1.00 41.32 P
ATOM 26 OP1 C A1019 53.647 99.195 104.214 1.00 41.41 O
ATOM 27 OP2 C A1019 53.915 97.865 106.383 1.00 42.09 O
ATOM 28 O5' C A1019 55.580 99.629 105.724 1.00 40.20 O
TER

ATOM 1 O3' G B2330 57.095 115.073 111.355 1.00 38.54 O
ATOM 2 P A B2331 57.068 113.829 112.366 1.00 39.14 P
ATOM 3 OP1 A B2331 56.016 114.011 113.412 1.00 35.81 O
ATOM 4 OP2 A B2331 58.459 113.536 112.772 1.00 38.86 O
ATOM 5 O5' A B2331 56.571 112.652 111.427 1.00 39.45 O
ATOM 6 C5' A B2331 55.175 112.532 111.128 1.00 37.35 C
ATOM 7 C4' A B2331 54.918 111.288 110.356 1.00 36.23 C
ATOM 8 O4' A B2331 55.738 111.273 109.168 1.00 34.75 O
ATOM 9 C3' A B2331 55.341 110.051 111.094 1.00 36.19 C
ATOM 10 O3' A B2331 54.333 109.731 112.040 1.00 38.51 O
ATOM 11 C2' A B2331 55.495 109.061 109.951 1.00 36.11 C
ATOM 12 O2' A B2331 54.235 108.668 109.429 1.00 37.71 O
ATOM 13 C1' A B2331 56.146 109.951 108.897 1.00 34.86 C
ATOM 14 N9 A B2331 57.607 109.910 108.889 1.00 35.68 N
ATOM 15 C8 A B2331 58.511 110.882 109.266 1.00 36.53 C
ATOM 16 N7 A B2331 59.763 110.548 109.064 1.00 36.35 N
ATOM 17 C5 A B2331 59.681 109.271 108.535 1.00 36.18 C
ATOM 18 C6 A B2331 60.662 108.378 108.079 1.00 36.72 C
ATOM 19 N6 A B2331 61.966 108.660 108.055 1.00 35.59 N
ATOM 20 N1 A B2331 60.252 107.178 107.624 1.00 36.83 N
ATOM 21 C2 A B2331 58.942 106.917 107.610 1.00 36.60 C
ATOM 22 N3 A B2331 57.925 107.681 107.988 1.00 35.78 N
ATOM 23 C4 A B2331 58.364 108.857 108.446 1.00 35.88 C
ATOM 24 P G B2332 54.727 108.946 113.377 1.00 41.24 P
ATOM 25 OP1 G B2332 53.498 108.874 114.223 1.00 39.43 O
ATOM 26 OP2 G B2332 55.943 109.609 113.904 1.00 39.58 O
ATOM 27 O5' G B2332 55.086 107.477 112.855 1.00 39.42 O
TER

Atoms:
OP1: (52.993,98.819,112.276)
OP2: (53.704,96.798,110.843)
C3': (53.250,100.411,107.783)
C1': (52.232,102.511,107.735)
C5': (51.691,99.843,109.741)
O6: (50.024,107.831,109.284)
O4': (51.251,101.615,108.192)
C8: (52.547,104.392,109.422)
C2: (49.269,105.448,106.746)
C6: (50.124,106.792,108.620)
C5: (51.035,105.736,108.784)
C4: (50.982,104.671,107.917)
P: (53.383,98.242,110.953)
C4': (51.826,100.298,108.315)
C2': (53.574,101.866,108.061)
O2': (54.546,102.326,107.160)
N1: (49.254,106.560,107.554)
N2: (48.321,105.373,105.787)
N3: (50.145,104.467,106.878)
N7: (52.026,105.551,109.726)
N9: (51.952,103.805,108.340)
O5': (52.248,98.538,109.881)
O3': (53.205,100.268,106.373)
OP1: (56.016,114.011,113.412)
OP2: (58.459,113.536,112.772)
C3': (55.341,110.051,111.094)
C1': (56.146,109.951,108.897)
C5': (55.175,112.532,111.128)
O4': (55.738,111.273,109.168)
C8: (58.511,110.882,109.266)
O2': (54.235,108.668,109.429)
C6: (60.662,108.378,108.079)
C5: (59.681,109.271,108.535)
C4: (58.364,108.857,108.446)
P: (57.068,113.829,112.366)
C4': (54.918,111.288,110.356)
C2': (55.495,109.061,109.951)
C2: (58.942,106.917,107.610)
N1: (60.252,107.178,107.624)
N3: (57.925,107.681,107.988)
N6: (61.966,108.660,108.055)
N7: (59.763,110.548,109.064)
N9: (57.607,109.910,108.889)
O5': (56.571,112.652,111.427)
O3': (54.333,109.731,112.040)
Image (generated by PyMOL):
PyMOL image
show in jmol