ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1446:A1519

Extra

PDB:
ATOM 1 O3' A A1445 -10.384 -3.838 50.136 1.00 52.63 O
ATOM 2 P U A1446 -10.570 -2.251 49.993 1.00 78.74 P
ATOM 3 OP1 U A1446 -9.308 -1.620 50.441 1.00 78.81 O
ATOM 4 OP2 U A1446 -11.849 -1.859 50.627 1.00 78.77 O
ATOM 5 O5' U A1446 -10.723 -1.997 48.432 1.00 75.31 O
ATOM 6 C5' U A1446 -10.214 -2.935 47.481 1.00 75.31 C
ATOM 7 C4' U A1446 -8.786 -2.614 47.153 1.00 75.31 C
ATOM 8 O4' U A1446 -7.981 -2.716 48.349 1.00 75.31 O
ATOM 9 C3' U A1446 -8.141 -3.571 46.172 1.00 75.31 C
ATOM 10 O3' U A1446 -8.426 -3.125 44.860 1.00 75.31 O
ATOM 11 C2' U A1446 -6.652 -3.472 46.506 1.00 75.31 C
ATOM 12 O2' U A1446 -5.988 -2.415 45.839 1.00 75.31 O
ATOM 13 C1' U A1446 -6.681 -3.151 48.003 1.00 75.31 C
ATOM 14 N1 U A1446 -6.252 -4.192 48.954 1.00 62.06 N
ATOM 15 C2 U A1446 -6.716 -5.496 48.810 1.00 61.91 C
ATOM 16 O2 U A1446 -7.426 -5.868 47.887 1.00 61.80 O
ATOM 17 N3 U A1446 -6.308 -6.353 49.794 1.00 61.84 N
ATOM 18 C4 U A1446 -5.499 -6.060 50.870 1.00 61.87 C
ATOM 19 O4 U A1446 -5.326 -6.908 51.747 1.00 61.85 O
ATOM 20 C5 U A1446 -5.032 -4.715 50.916 1.00 61.82 C
ATOM 21 C6 U A1446 -5.415 -3.852 49.985 1.00 62.00 C
ATOM 22 P C A1447 -8.329 -4.147 43.637 1.00 76.91 P
ATOM 23 OP1 C A1447 -6.917 -4.594 43.518 1.00 75.42 O
ATOM 24 OP2 C A1447 -8.987 -3.490 42.480 1.00 75.42 O
ATOM 25 O5' C A1447 -9.216 -5.378 44.120 1.00 51.52 O
TER

ATOM 1 O3' C B1518 -8.479 -8.924 48.339 1.00 28.10 O
ATOM 2 P U B1519 -7.375 -9.438 49.387 1.00 46.71 P
ATOM 3 OP1 U B1519 -6.051 -9.085 48.804 1.00 68.45 O
ATOM 4 OP2 U B1519 -7.651 -10.849 49.777 1.00 68.13 O
ATOM 5 O5' U B1519 -7.634 -8.531 50.670 1.00 39.67 O
ATOM 6 C5' U B1519 -7.804 -9.124 51.969 1.00 39.67 C
ATOM 7 C4' U B1519 -9.235 -8.997 52.403 1.00 39.67 C
ATOM 8 O4' U B1519 -10.081 -9.504 51.343 1.00 39.67 O
ATOM 9 C3' U B1519 -9.621 -9.798 53.634 1.00 39.67 C
ATOM 10 O3' U B1519 -9.316 -9.115 54.853 1.00 39.67 O
ATOM 11 C2' U B1519 -11.113 -10.004 53.418 1.00 39.67 C
ATOM 12 O2' U B1519 -11.884 -8.881 53.803 1.00 39.67 O
ATOM 13 C1' U B1519 -11.182 -10.197 51.899 1.00 39.67 C
ATOM 14 N1 U B1519 -11.075 -11.611 51.496 1.00 35.19 N
ATOM 15 C2 U B1519 -11.961 -12.535 52.058 1.00 35.19 C
ATOM 16 O2 U B1519 -12.861 -12.221 52.837 1.00 35.19 O
ATOM 17 N3 U B1519 -11.751 -13.842 51.675 1.00 35.19 N
ATOM 18 C4 U B1519 -10.786 -14.308 50.814 1.00 35.19 C
ATOM 19 O4 U B1519 -10.631 -15.517 50.689 1.00 35.19 O
ATOM 20 C5 U B1519 -9.948 -13.300 50.255 1.00 35.19 C
ATOM 21 C6 U B1519 -10.114 -12.023 50.604 1.00 35.19 C
ATOM 22 P A B1520 -8.775 -9.944 56.129 1.00118.56 P
ATOM 23 OP1 A B1520 -8.078 -8.989 57.030 1.00172.55 O
ATOM 24 OP2 A B1520 -8.058 -11.161 55.662 1.00172.39 O
ATOM 25 O5' A B1520 -10.108 -10.410 56.860 1.00 54.20 O
TER

Atoms:
C4: (-5.499,-6.060,50.870)
N3: (-6.308,-6.353,49.794)
OP1: (-9.308,-1.620,50.441)
OP2: (-11.849,-1.859,50.627)
C2: (-6.716,-5.496,48.810)
C1': (-6.681,-3.151,48.003)
C3': (-8.141,-3.571,46.172)
O5': (-10.723,-1.997,48.432)
O4': (-7.981,-2.716,48.349)
C5': (-10.214,-2.935,47.481)
P: (-10.570,-2.251,49.993)
C4': (-8.786,-2.614,47.153)
C2': (-6.652,-3.472,46.506)
O2': (-5.988,-2.415,45.839)
N1: (-6.252,-4.192,48.954)
O4: (-5.326,-6.908,51.747)
O2: (-7.426,-5.868,47.887)
C6: (-5.415,-3.852,49.985)
C5: (-5.032,-4.715,50.916)
O3': (-8.426,-3.125,44.860)
C4: (-10.786,-14.308,50.814)
N3: (-11.751,-13.842,51.675)
OP1: (-6.051,-9.085,48.804)
OP2: (-7.651,-10.849,49.777)
C2: (-11.961,-12.535,52.058)
C1': (-11.182,-10.197,51.899)
C3': (-9.621,-9.798,53.634)
O5': (-7.634,-8.531,50.670)
O4': (-10.081,-9.504,51.343)
C5': (-7.804,-9.124,51.969)
P: (-7.375,-9.438,49.387)
C4': (-9.235,-8.997,52.403)
C2': (-11.113,-10.004,53.418)
O2': (-11.884,-8.881,53.803)
N1: (-11.075,-11.611,51.496)
O4: (-10.631,-15.517,50.689)
O2: (-12.861,-12.221,52.837)
C6: (-10.114,-12.023,50.604)
C5: (-9.948,-13.300,50.255)
O3': (-9.316,-9.115,54.853)
Image (generated by PyMOL):
PyMOL image
show in jmol