ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01018:02331

Extra

PDB:
ATOM 1 O3' A A1017 54.531 97.777 109.880 1.00 44.09 O
ATOM 2 P G A1018 53.282 96.843 110.281 1.00 46.35 P
ATOM 3 OP1 G A1018 52.819 97.313 111.618 1.00 46.85 O
ATOM 4 OP2 G A1018 53.626 95.407 110.069 1.00 45.30 O
ATOM 5 O5' G A1018 52.172 97.203 109.201 1.00 47.16 O
ATOM 6 C5' G A1018 51.609 98.516 109.140 1.00 43.96 C
ATOM 7 C4' G A1018 51.665 99.028 107.727 1.00 42.49 C
ATOM 8 O4' G A1018 51.074 100.353 107.706 1.00 42.43 O
ATOM 9 C3' G A1018 53.077 99.189 107.165 1.00 43.45 C
ATOM 10 O3' G A1018 53.041 99.031 105.737 1.00 42.93 O
ATOM 11 C2' G A1018 53.390 100.636 107.532 1.00 42.65 C
ATOM 12 O2' G A1018 54.396 101.183 106.714 1.00 47.49 O
ATOM 13 C1' G A1018 52.034 101.289 107.271 1.00 40.57 C
ATOM 14 N9 G A1018 51.745 102.573 107.906 1.00 39.31 N
ATOM 15 C8 G A1018 52.426 103.190 108.929 1.00 39.18 C
ATOM 16 N7 G A1018 51.914 104.343 109.261 1.00 37.65 N
ATOM 17 C5 G A1018 50.832 104.499 108.408 1.00 35.48 C
ATOM 18 C6 G A1018 49.911 105.559 108.287 1.00 35.32 C
ATOM 19 O6 G A1018 49.861 106.609 108.926 1.00 35.50 O
ATOM 20 N1 G A1018 48.974 105.311 107.291 1.00 36.30 N
ATOM 21 C2 G A1018 48.931 104.190 106.507 1.00 35.40 C
ATOM 22 N2 G A1018 47.942 104.141 105.599 1.00 34.13 N
ATOM 23 N3 G A1018 49.791 103.195 106.605 1.00 34.66 N
ATOM 24 C4 G A1018 50.709 103.415 107.570 1.00 36.52 C
ATOM 25 P C A1019 53.976 97.931 105.012 1.00 43.66 P
ATOM 26 OP1 C A1019 53.589 97.891 103.575 1.00 46.83 O
ATOM 27 OP2 C A1019 53.974 96.680 105.793 1.00 44.70 O
ATOM 28 O5' C A1019 55.432 98.575 105.038 1.00 45.03 O
TER

ATOM 1 O3' G B2330 56.761 113.915 111.010 1.00 34.77 O
ATOM 2 P A B2331 56.780 112.771 112.131 1.00 36.80 P
ATOM 3 OP1 A B2331 55.891 113.209 113.237 1.00 37.01 O
ATOM 4 OP2 A B2331 58.195 112.423 112.413 1.00 38.66 O
ATOM 5 O5' A B2331 56.149 111.494 111.418 1.00 39.67 O
ATOM 6 C5' A B2331 54.797 111.501 110.934 1.00 39.32 C
ATOM 7 C4' A B2331 54.504 110.219 110.193 1.00 39.44 C
ATOM 8 O4' A B2331 55.240 110.191 108.944 1.00 39.39 O
ATOM 9 C3' A B2331 54.926 108.947 110.909 1.00 38.09 C
ATOM 10 O3' A B2331 53.966 108.562 111.887 1.00 39.74 O
ATOM 11 C2' A B2331 55.059 107.960 109.753 1.00 40.58 C
ATOM 12 O2' A B2331 53.818 107.444 109.300 1.00 42.03 O
ATOM 13 C1' A B2331 55.661 108.857 108.667 1.00 40.31 C
ATOM 14 N9 A B2331 57.123 108.832 108.666 1.00 38.92 N
ATOM 15 C8 A B2331 57.975 109.790 109.170 1.00 38.48 C
ATOM 16 N7 A B2331 59.245 109.495 109.028 1.00 39.24 N
ATOM 17 C5 A B2331 59.232 108.264 108.390 1.00 37.27 C
ATOM 18 C6 A B2331 60.263 107.417 107.957 1.00 37.20 C
ATOM 19 N6 A B2331 61.556 107.698 108.107 1.00 36.25 N
ATOM 20 N1 A B2331 59.917 106.258 107.358 1.00 35.13 N
ATOM 21 C2 A B2331 58.618 105.981 107.207 1.00 35.30 C
ATOM 22 N3 A B2331 57.556 106.695 107.569 1.00 37.81 N
ATOM 23 C4 A B2331 57.934 107.840 108.163 1.00 38.12 C
ATOM 24 P G B2332 54.437 107.796 113.225 1.00 38.52 P
ATOM 25 OP1 G B2332 53.253 107.741 114.106 1.00 39.49 O
ATOM 26 OP2 G B2332 55.697 108.391 113.725 1.00 40.02 O
ATOM 27 O5' G B2332 54.772 106.320 112.745 1.00 38.14 O
TER

Atoms:
OP1: (52.819,97.313,111.618)
OP2: (53.626,95.407,110.069)
C3': (53.077,99.189,107.165)
C1': (52.034,101.289,107.271)
C5': (51.609,98.516,109.140)
O6: (49.861,106.609,108.926)
O4': (51.074,100.353,107.706)
C8: (52.426,103.190,108.929)
C2: (48.931,104.190,106.507)
C6: (49.911,105.559,108.287)
C5: (50.832,104.499,108.408)
C4: (50.709,103.415,107.570)
P: (53.282,96.843,110.281)
C4': (51.665,99.028,107.727)
C2': (53.390,100.636,107.532)
O2': (54.396,101.183,106.714)
N1: (48.974,105.311,107.291)
N2: (47.942,104.141,105.599)
N3: (49.791,103.195,106.605)
N7: (51.914,104.343,109.261)
N9: (51.745,102.573,107.906)
O5': (52.172,97.203,109.201)
O3': (53.041,99.031,105.737)
OP1: (55.891,113.209,113.237)
OP2: (58.195,112.423,112.413)
C3': (54.926,108.947,110.909)
C1': (55.661,108.857,108.667)
C5': (54.797,111.501,110.934)
O4': (55.240,110.191,108.944)
C8: (57.975,109.790,109.170)
O2': (53.818,107.444,109.300)
C6: (60.263,107.417,107.957)
C5: (59.232,108.264,108.390)
C4: (57.934,107.840,108.163)
P: (56.780,112.771,112.131)
C4': (54.504,110.219,110.193)
C2': (55.059,107.960,109.753)
C2: (58.618,105.981,107.207)
N1: (59.917,106.258,107.358)
N3: (57.556,106.695,107.569)
N6: (61.556,107.698,108.107)
N7: (59.245,109.495,109.028)
N9: (57.123,108.832,108.666)
O5': (56.149,111.494,111.418)
O3': (53.966,108.562,111.887)
Image (generated by PyMOL):
PyMOL image
show in jmol