ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:01018:02331

Extra

PDB:
ATOM 1 O3' A A1017 54.512 97.661 109.977 1.00 44.18 O
ATOM 2 P G A1018 53.290 96.657 110.281 1.00 47.12 P
ATOM 3 OP1 G A1018 52.785 97.006 111.631 1.00 47.27 O
ATOM 4 OP2 G A1018 53.691 95.256 109.976 1.00 45.88 O
ATOM 5 O5' G A1018 52.186 97.057 109.206 1.00 48.18 O
ATOM 6 C5' G A1018 51.650 98.386 109.157 1.00 43.81 C
ATOM 7 C4' G A1018 51.718 98.913 107.747 1.00 43.52 C
ATOM 8 O4' G A1018 51.120 100.237 107.718 1.00 41.81 O
ATOM 9 C3' G A1018 53.135 99.081 107.200 1.00 44.30 C
ATOM 10 O3' G A1018 53.113 98.931 105.776 1.00 44.73 O
ATOM 11 C2' G A1018 53.441 100.527 107.571 1.00 43.06 C
ATOM 12 O2' G A1018 54.454 101.068 106.757 1.00 46.59 O
ATOM 13 C1' G A1018 52.085 101.179 107.304 1.00 40.11 C
ATOM 14 N9 G A1018 51.793 102.449 107.964 1.00 37.72 N
ATOM 15 C8 G A1018 52.470 103.037 109.004 1.00 36.83 C
ATOM 16 N7 G A1018 51.963 104.186 109.360 1.00 35.22 N
ATOM 17 C5 G A1018 50.887 104.368 108.505 1.00 33.66 C
ATOM 18 C6 G A1018 49.978 105.437 108.403 1.00 34.08 C
ATOM 19 O6 G A1018 49.941 106.479 109.060 1.00 34.27 O
ATOM 20 N1 G A1018 49.039 105.218 107.403 1.00 34.21 N
ATOM 21 C2 G A1018 48.986 104.112 106.599 1.00 35.23 C
ATOM 22 N2 G A1018 47.983 104.081 105.701 1.00 34.43 N
ATOM 23 N3 G A1018 49.844 103.112 106.672 1.00 33.88 N
ATOM 24 C4 G A1018 50.761 103.305 107.643 1.00 35.09 C
ATOM 25 P C A1019 54.033 97.818 105.062 1.00 46.08 P
ATOM 26 OP1 C A1019 53.619 97.743 103.635 1.00 49.86 O
ATOM 27 OP2 C A1019 54.040 96.585 105.878 1.00 48.39 O
ATOM 28 O5' C A1019 55.492 98.457 105.057 1.00 46.87 O
TER

ATOM 1 O3' G B2330 56.801 113.821 111.077 1.00 35.10 O
ATOM 2 P A B2331 56.805 112.680 112.211 1.00 37.50 P
ATOM 3 OP1 A B2331 55.907 113.154 113.289 1.00 38.01 O
ATOM 4 OP2 A B2331 58.202 112.293 112.531 1.00 39.47 O
ATOM 5 O5' A B2331 56.164 111.409 111.494 1.00 40.42 O
ATOM 6 C5' A B2331 54.803 111.411 111.035 1.00 38.77 C
ATOM 7 C4' A B2331 54.514 110.141 110.268 1.00 39.05 C
ATOM 8 O4' A B2331 55.262 110.136 109.022 1.00 38.28 O
ATOM 9 C3' A B2331 54.941 108.856 110.959 1.00 37.34 C
ATOM 10 O3' A B2331 53.995 108.438 111.936 1.00 39.29 O
ATOM 11 C2' A B2331 55.073 107.892 109.786 1.00 39.24 C
ATOM 12 O2' A B2331 53.829 107.399 109.314 1.00 38.83 O
ATOM 13 C1' A B2331 55.685 108.808 108.723 1.00 38.48 C
ATOM 14 N9 A B2331 57.148 108.776 108.740 1.00 37.80 N
ATOM 15 C8 A B2331 58.000 109.717 109.275 1.00 37.05 C
ATOM 16 N7 A B2331 59.269 109.416 109.141 1.00 38.38 N
ATOM 17 C5 A B2331 59.257 108.198 108.477 1.00 36.16 C
ATOM 18 C6 A B2331 60.290 107.357 108.036 1.00 37.84 C
ATOM 19 N6 A B2331 61.586 107.630 108.209 1.00 37.09 N
ATOM 20 N1 A B2331 59.944 106.212 107.403 1.00 35.40 N
ATOM 21 C2 A B2331 58.644 105.946 107.232 1.00 35.97 C
ATOM 22 N3 A B2331 57.579 106.660 107.600 1.00 36.82 N
ATOM 23 C4 A B2331 57.958 107.789 108.224 1.00 36.55 C
ATOM 24 P G B2332 54.499 107.675 113.265 1.00 37.73 P
ATOM 25 OP1 G B2332 53.360 107.654 114.203 1.00 38.44 O
ATOM 26 OP2 G B2332 55.794 108.255 113.695 1.00 37.59 O
ATOM 27 O5' G B2332 54.802 106.192 112.783 1.00 36.82 O
TER

Atoms:
OP1: (52.785,97.006,111.631)
OP2: (53.691,95.256,109.976)
C3': (53.135,99.081,107.200)
C1': (52.085,101.179,107.304)
C5': (51.650,98.386,109.157)
O6: (49.941,106.479,109.060)
O4': (51.120,100.237,107.718)
C8: (52.470,103.037,109.004)
C2: (48.986,104.112,106.599)
C6: (49.978,105.437,108.403)
C5: (50.887,104.368,108.505)
C4: (50.761,103.305,107.643)
P: (53.290,96.657,110.281)
C4': (51.718,98.913,107.747)
C2': (53.441,100.527,107.571)
O2': (54.454,101.068,106.757)
N1: (49.039,105.218,107.403)
N2: (47.983,104.081,105.701)
N3: (49.844,103.112,106.672)
N7: (51.963,104.186,109.360)
N9: (51.793,102.449,107.964)
O5': (52.186,97.057,109.206)
O3': (53.113,98.931,105.776)
OP1: (55.907,113.154,113.289)
OP2: (58.202,112.293,112.531)
C3': (54.941,108.856,110.959)
C1': (55.685,108.808,108.723)
C5': (54.803,111.411,111.035)
O4': (55.262,110.136,109.022)
C8: (58.000,109.717,109.275)
O2': (53.829,107.399,109.314)
C6: (60.290,107.357,108.036)
C5: (59.257,108.198,108.477)
C4: (57.958,107.789,108.224)
P: (56.805,112.680,112.211)
C4': (54.514,110.141,110.268)
C2': (55.073,107.892,109.786)
C2: (58.644,105.946,107.232)
N1: (59.944,106.212,107.403)
N3: (57.579,106.660,107.600)
N6: (61.586,107.630,108.209)
N7: (59.269,109.416,109.141)
N9: (57.148,108.776,108.740)
O5': (56.164,111.409,111.494)
O3': (53.995,108.438,111.936)
Image (generated by PyMOL):
PyMOL image
show in jmol