ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01018:02331

Extra

PDB:
ATOM 1 O3' A A1017 54.583 98.764 109.996 1.00 43.13 O
ATOM 2 P G A1018 53.298 97.910 110.454 1.00 42.98 P
ATOM 3 OP1 G A1018 52.869 98.430 111.790 1.00 38.83 O
ATOM 4 OP2 G A1018 53.606 96.463 110.281 1.00 42.30 O
ATOM 5 O5' G A1018 52.197 98.290 109.371 1.00 41.30 O
ATOM 6 C5' G A1018 51.712 99.632 109.264 1.00 39.55 C
ATOM 7 C4' G A1018 51.826 100.112 107.841 1.00 38.16 C
ATOM 8 O4' G A1018 51.242 101.441 107.755 1.00 37.43 O
ATOM 9 C3' G A1018 53.249 100.245 107.309 1.00 37.25 C
ATOM 10 O3' G A1018 53.223 100.063 105.896 1.00 37.79 O
ATOM 11 C2' G A1018 53.566 101.703 107.627 1.00 38.12 C
ATOM 12 O2' G A1018 54.590 102.231 106.814 1.00 40.77 O
ATOM 13 C1' G A1018 52.220 102.357 107.316 1.00 37.25 C
ATOM 14 N9 G A1018 51.930 103.656 107.917 1.00 36.90 N
ATOM 15 C8 G A1018 52.610 104.313 108.913 1.00 37.25 C
ATOM 16 N7 G A1018 52.083 105.470 109.214 1.00 36.73 N
ATOM 17 C5 G A1018 50.990 105.579 108.371 1.00 36.04 C
ATOM 18 C6 G A1018 50.032 106.614 108.232 1.00 37.80 C
ATOM 19 O6 G A1018 49.945 107.679 108.858 1.00 39.99 O
ATOM 20 N1 G A1018 49.100 106.316 107.244 1.00 38.06 N
ATOM 21 C2 G A1018 49.086 105.172 106.489 1.00 38.78 C
ATOM 22 N2 G A1018 48.109 105.071 105.580 1.00 41.55 N
ATOM 23 N3 G A1018 49.965 104.200 106.613 1.00 38.73 N
ATOM 24 C4 G A1018 50.883 104.468 107.565 1.00 37.61 C
ATOM 25 P C A1019 54.011 98.835 105.222 1.00 42.03 P
ATOM 26 OP1 C A1019 53.597 98.764 103.795 1.00 42.17 O
ATOM 27 OP2 C A1019 53.840 97.643 106.087 1.00 42.00 O
ATOM 28 O5' C A1019 55.532 99.316 105.204 1.00 41.40 O
TER

ATOM 1 O3' G B2330 57.027 114.816 110.952 1.00 39.78 O
ATOM 2 P A B2331 57.060 113.615 112.019 1.00 41.82 P
ATOM 3 OP1 A B2331 56.154 113.961 113.151 1.00 39.99 O
ATOM 4 OP2 A B2331 58.474 113.266 112.291 1.00 41.89 O
ATOM 5 O5' A B2331 56.450 112.379 111.229 1.00 39.83 O
ATOM 6 C5' A B2331 55.088 112.373 110.796 1.00 36.76 C
ATOM 7 C4' A B2331 54.825 111.133 109.983 1.00 38.15 C
ATOM 8 O4' A B2331 55.628 111.155 108.771 1.00 37.64 O
ATOM 9 C3' A B2331 55.236 109.840 110.662 1.00 37.82 C
ATOM 10 O3' A B2331 54.245 109.414 111.578 1.00 38.83 O
ATOM 11 C2' A B2331 55.401 108.897 109.481 1.00 38.85 C
ATOM 12 O2' A B2331 54.167 108.422 108.976 1.00 42.55 O
ATOM 13 C1' A B2331 56.033 109.833 108.448 1.00 38.18 C
ATOM 14 N9 A B2331 57.494 109.773 108.462 1.00 36.67 N
ATOM 15 C8 A B2331 58.385 110.708 108.921 1.00 36.25 C
ATOM 16 N7 A B2331 59.639 110.355 108.782 1.00 36.57 N
ATOM 17 C5 A B2331 59.569 109.104 108.192 1.00 35.72 C
ATOM 18 C6 A B2331 60.557 108.203 107.768 1.00 37.25 C
ATOM 19 N6 A B2331 61.865 108.439 107.862 1.00 36.66 N
ATOM 20 N1 A B2331 60.149 107.035 107.223 1.00 39.38 N
ATOM 21 C2 A B2331 58.836 106.808 107.104 1.00 38.53 C
ATOM 22 N3 A B2331 57.814 107.584 107.453 1.00 37.90 N
ATOM 23 C4 A B2331 58.255 108.730 107.997 1.00 36.39 C
ATOM 24 P G B2332 54.678 108.705 112.948 1.00 36.79 P
ATOM 25 OP1 G B2332 53.476 108.756 113.815 1.00 36.82 O
ATOM 26 OP2 G B2332 55.946 109.288 113.424 1.00 39.05 O
ATOM 27 O5' G B2332 54.991 107.205 112.524 1.00 36.06 O
TER

Atoms:
OP1: (52.869,98.430,111.790)
OP2: (53.606,96.463,110.281)
C3': (53.249,100.245,107.309)
C1': (52.220,102.357,107.316)
C5': (51.712,99.632,109.264)
O6: (49.945,107.679,108.858)
O4': (51.242,101.441,107.755)
C8: (52.610,104.313,108.913)
C2: (49.086,105.172,106.489)
C6: (50.032,106.614,108.232)
C5: (50.990,105.579,108.371)
C4: (50.883,104.468,107.565)
P: (53.298,97.910,110.454)
C4': (51.826,100.112,107.841)
C2': (53.566,101.703,107.627)
O2': (54.590,102.231,106.814)
N1: (49.100,106.316,107.244)
N2: (48.109,105.071,105.580)
N3: (49.965,104.200,106.613)
N7: (52.083,105.470,109.214)
N9: (51.930,103.656,107.917)
O5': (52.197,98.290,109.371)
O3': (53.223,100.063,105.896)
OP1: (56.154,113.961,113.151)
OP2: (58.474,113.266,112.291)
C3': (55.236,109.840,110.662)
C1': (56.033,109.833,108.448)
C5': (55.088,112.373,110.796)
O4': (55.628,111.155,108.771)
C8: (58.385,110.708,108.921)
O2': (54.167,108.422,108.976)
C6: (60.557,108.203,107.768)
C5: (59.569,109.104,108.192)
C4: (58.255,108.730,107.997)
P: (57.060,113.615,112.019)
C4': (54.825,111.133,109.983)
C2': (55.401,108.897,109.481)
C2: (58.836,106.808,107.104)
N1: (60.149,107.035,107.223)
N3: (57.814,107.584,107.453)
N6: (61.865,108.439,107.862)
N7: (59.639,110.355,108.782)
N9: (57.494,109.773,108.462)
O5': (56.450,112.379,111.229)
O3': (54.245,109.414,111.578)
Image (generated by PyMOL):
PyMOL image
show in jmol