ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01018:02331

Extra

PDB:
ATOM 1 O3' A A1017 54.553 98.972 110.008 1.00 42.81 O
ATOM 2 P G A1018 53.278 98.093 110.454 1.00 43.85 P
ATOM 3 OP1 G A1018 52.815 98.578 111.793 1.00 39.22 O
ATOM 4 OP2 G A1018 53.598 96.651 110.262 1.00 42.30 O
ATOM 5 O5' G A1018 52.176 98.482 109.373 1.00 42.65 O
ATOM 6 C5' G A1018 51.688 99.825 109.276 1.00 40.64 C
ATOM 7 C4' G A1018 51.794 100.313 107.853 1.00 39.37 C
ATOM 8 O4' G A1018 51.192 101.635 107.764 1.00 38.55 O
ATOM 9 C3' G A1018 53.214 100.466 107.318 1.00 38.90 C
ATOM 10 O3' G A1018 53.183 100.286 105.906 1.00 38.58 O
ATOM 11 C2' G A1018 53.514 101.927 107.631 1.00 39.03 C
ATOM 12 O2' G A1018 54.523 102.462 106.802 1.00 41.38 O
ATOM 13 C1' G A1018 52.160 102.562 107.324 1.00 37.73 C
ATOM 14 N9 G A1018 51.861 103.862 107.919 1.00 35.97 N
ATOM 15 C8 G A1018 52.531 104.522 108.919 1.00 35.48 C
ATOM 16 N7 G A1018 52.008 105.684 109.205 1.00 34.52 N
ATOM 17 C5 G A1018 50.927 105.794 108.347 1.00 35.05 C
ATOM 18 C6 G A1018 49.983 106.839 108.182 1.00 36.11 C
ATOM 19 O6 G A1018 49.899 107.911 108.796 1.00 36.61 O
ATOM 20 N1 G A1018 49.064 106.541 107.179 1.00 37.14 N
ATOM 21 C2 G A1018 49.050 105.389 106.431 1.00 37.06 C
ATOM 22 N2 G A1018 48.091 105.293 105.499 1.00 38.95 N
ATOM 23 N3 G A1018 49.914 104.407 106.582 1.00 36.87 N
ATOM 24 C4 G A1018 50.821 104.676 107.549 1.00 36.51 C
ATOM 25 P C A1019 53.953 99.049 105.234 1.00 42.29 P
ATOM 26 OP1 C A1019 53.520 98.963 103.816 1.00 43.66 O
ATOM 27 OP2 C A1019 53.782 97.866 106.114 1.00 42.89 O
ATOM 28 O5' C A1019 55.476 99.515 105.208 1.00 41.41 O
TER

ATOM 1 O3' G B2330 56.989 115.023 110.889 1.00 40.66 O
ATOM 2 P A B2331 57.043 113.845 111.982 1.00 43.26 P
ATOM 3 OP1 A B2331 56.145 114.224 113.114 1.00 41.09 O
ATOM 4 OP2 A B2331 58.466 113.511 112.247 1.00 42.21 O
ATOM 5 O5' A B2331 56.426 112.585 111.233 1.00 41.47 O
ATOM 6 C5' A B2331 55.070 112.581 110.793 1.00 37.81 C
ATOM 7 C4' A B2331 54.807 111.347 109.978 1.00 39.55 C
ATOM 8 O4' A B2331 55.626 111.366 108.777 1.00 38.64 O
ATOM 9 C3' A B2331 55.182 110.041 110.655 1.00 39.57 C
ATOM 10 O3' A B2331 54.165 109.623 111.556 1.00 41.07 O
ATOM 11 C2' A B2331 55.342 109.105 109.464 1.00 40.69 C
ATOM 12 O2' A B2331 54.100 108.667 108.943 1.00 41.64 O
ATOM 13 C1' A B2331 56.007 110.038 108.446 1.00 39.71 C
ATOM 14 N9 A B2331 57.469 109.954 108.462 1.00 37.51 N
ATOM 15 C8 A B2331 58.373 110.871 108.935 1.00 38.16 C
ATOM 16 N7 A B2331 59.623 110.504 108.787 1.00 38.08 N
ATOM 17 C5 A B2331 59.537 109.262 108.180 1.00 36.54 C
ATOM 18 C6 A B2331 60.515 108.356 107.738 1.00 37.83 C
ATOM 19 N6 A B2331 61.827 108.572 107.843 1.00 37.34 N
ATOM 20 N1 A B2331 60.094 107.206 107.169 1.00 38.66 N
ATOM 21 C2 A B2331 58.778 106.995 107.050 1.00 38.78 C
ATOM 22 N3 A B2331 57.762 107.775 107.420 1.00 38.27 N
ATOM 23 C4 A B2331 58.216 108.907 107.982 1.00 37.04 C
ATOM 24 P G B2332 54.566 108.889 112.926 1.00 39.30 P
ATOM 25 OP1 G B2332 53.347 108.892 113.770 1.00 38.22 O
ATOM 26 OP2 G B2332 55.819 109.494 113.444 1.00 39.44 O
ATOM 27 O5' G B2332 54.900 107.397 112.483 1.00 38.43 O
TER

Atoms:
OP1: (52.815,98.578,111.793)
OP2: (53.598,96.651,110.262)
C3': (53.214,100.466,107.318)
C1': (52.160,102.562,107.324)
C5': (51.688,99.825,109.276)
O6: (49.899,107.911,108.796)
O4': (51.192,101.635,107.764)
C8: (52.531,104.522,108.919)
C2: (49.050,105.389,106.431)
C6: (49.983,106.839,108.182)
C5: (50.927,105.794,108.347)
C4: (50.821,104.676,107.549)
P: (53.278,98.093,110.454)
C4': (51.794,100.313,107.853)
C2': (53.514,101.927,107.631)
O2': (54.523,102.462,106.802)
N1: (49.064,106.541,107.179)
N2: (48.091,105.293,105.499)
N3: (49.914,104.407,106.582)
N7: (52.008,105.684,109.205)
N9: (51.861,103.862,107.919)
O5': (52.176,98.482,109.373)
O3': (53.183,100.286,105.906)
OP1: (56.145,114.224,113.114)
OP2: (58.466,113.511,112.247)
C3': (55.182,110.041,110.655)
C1': (56.007,110.038,108.446)
C5': (55.070,112.581,110.793)
O4': (55.626,111.366,108.777)
C8: (58.373,110.871,108.935)
O2': (54.100,108.667,108.943)
C6: (60.515,108.356,107.738)
C5: (59.537,109.262,108.180)
C4: (58.216,108.907,107.982)
P: (57.043,113.845,111.982)
C4': (54.807,111.347,109.978)
C2': (55.342,109.105,109.464)
C2: (58.778,106.995,107.050)
N1: (60.094,107.206,107.169)
N3: (57.762,107.775,107.420)
N6: (61.827,108.572,107.843)
N7: (59.623,110.504,108.787)
N9: (57.469,109.954,108.462)
O5': (56.426,112.585,111.233)
O3': (54.165,109.623,111.556)
Image (generated by PyMOL):
PyMOL image
show in jmol