Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01018:02331
Extra
PDB:
ATOM 1 O3' A A1017 54.529 98.889 110.050 1.00 45.74 O
ATOM 2 P G A1018 53.256 98.008 110.490 1.00 47.57 P
ATOM 3 OP1 G A1018 52.765 98.531 111.801 1.00 43.82 O
ATOM 4 OP2 G A1018 53.603 96.570 110.348 1.00 48.84 O
ATOM 5 O5' G A1018 52.174 98.344 109.376 1.00 44.78 O
ATOM 6 C5' G A1018 51.672 99.673 109.247 1.00 42.59 C
ATOM 7 C4' G A1018 51.817 100.146 107.828 1.00 40.06 C
ATOM 8 O4' G A1018 51.238 101.473 107.739 1.00 38.91 O
ATOM 9 C3' G A1018 53.243 100.272 107.304 1.00 38.37 C
ATOM 10 O3' G A1018 53.203 100.094 105.891 1.00 39.42 O
ATOM 11 C2' G A1018 53.563 101.730 107.610 1.00 38.72 C
ATOM 12 O2' G A1018 54.562 102.240 106.757 1.00 38.84 O
ATOM 13 C1' G A1018 52.217 102.384 107.302 1.00 39.21 C
ATOM 14 N9 G A1018 51.914 103.689 107.883 1.00 39.47 N
ATOM 15 C8 G A1018 52.581 104.367 108.875 1.00 40.25 C
ATOM 16 N7 G A1018 52.043 105.525 109.155 1.00 40.00 N
ATOM 17 C5 G A1018 50.956 105.614 108.300 1.00 40.52 C
ATOM 18 C6 G A1018 49.995 106.642 108.137 1.00 41.04 C
ATOM 19 O6 G A1018 49.899 107.713 108.743 1.00 41.80 O
ATOM 20 N1 G A1018 49.071 106.324 107.149 1.00 41.90 N
ATOM 21 C2 G A1018 49.064 105.162 106.417 1.00 42.34 C
ATOM 22 N2 G A1018 48.083 105.033 105.516 1.00 44.44 N
ATOM 23 N3 G A1018 49.950 104.197 106.560 1.00 41.51 N
ATOM 24 C4 G A1018 50.863 104.488 107.511 1.00 40.90 C
ATOM 25 P C A1019 53.972 98.863 105.203 1.00 42.51 P
ATOM 26 OP1 C A1019 53.473 98.744 103.809 1.00 43.61 O
ATOM 27 OP2 C A1019 53.899 97.681 106.099 1.00 43.06 O
ATOM 28 O5' C A1019 55.478 99.367 105.098 1.00 40.89 O
TER
ATOM 1 O3' G B2330 56.873 114.944 110.921 1.00 41.98 O
ATOM 2 P A B2331 56.804 113.743 111.980 1.00 42.75 P
ATOM 3 OP1 A B2331 55.776 114.077 113.011 1.00 39.99 O
ATOM 4 OP2 A B2331 58.193 113.428 112.390 1.00 42.79 O
ATOM 5 O5' A B2331 56.285 112.514 111.124 1.00 41.00 O
ATOM 6 C5' A B2331 54.927 112.445 110.711 1.00 40.99 C
ATOM 7 C4' A B2331 54.697 111.173 109.958 1.00 42.73 C
ATOM 8 O4' A B2331 55.519 111.168 108.764 1.00 42.28 O
ATOM 9 C3' A B2331 55.115 109.914 110.692 1.00 42.18 C
ATOM 10 O3' A B2331 54.110 109.514 111.604 1.00 40.95 O
ATOM 11 C2' A B2331 55.297 108.933 109.543 1.00 43.48 C
ATOM 12 O2' A B2331 54.063 108.444 109.043 1.00 46.11 O
ATOM 13 C1' A B2331 55.930 109.840 108.485 1.00 42.94 C
ATOM 14 N9 A B2331 57.391 109.801 108.482 1.00 42.06 N
ATOM 15 C8 A B2331 58.272 110.771 108.885 1.00 41.91 C
ATOM 16 N7 A B2331 59.529 110.437 108.733 1.00 42.10 N
ATOM 17 C5 A B2331 59.472 109.159 108.200 1.00 42.13 C
ATOM 18 C6 A B2331 60.470 108.255 107.804 1.00 43.30 C
ATOM 19 N6 A B2331 61.775 108.509 107.880 1.00 43.82 N
ATOM 20 N1 A B2331 60.075 107.062 107.314 1.00 43.61 N
ATOM 21 C2 A B2331 58.764 106.809 107.228 1.00 43.62 C
ATOM 22 N3 A B2331 57.734 107.579 107.563 1.00 42.05 N
ATOM 23 C4 A B2331 58.162 108.753 108.047 1.00 41.66 C
ATOM 24 P G B2332 54.517 108.761 112.952 1.00 41.14 P
ATOM 25 OP1 G B2332 53.285 108.703 113.776 1.00 39.87 O
ATOM 26 OP2 G B2332 55.738 109.385 113.504 1.00 40.65 O
ATOM 27 O5' G B2332 54.898 107.292 112.471 1.00 40.42 O
TER
ATOM 2 P G A1018 53.256 98.008 110.490 1.00 47.57 P
ATOM 3 OP1 G A1018 52.765 98.531 111.801 1.00 43.82 O
ATOM 4 OP2 G A1018 53.603 96.570 110.348 1.00 48.84 O
ATOM 5 O5' G A1018 52.174 98.344 109.376 1.00 44.78 O
ATOM 6 C5' G A1018 51.672 99.673 109.247 1.00 42.59 C
ATOM 7 C4' G A1018 51.817 100.146 107.828 1.00 40.06 C
ATOM 8 O4' G A1018 51.238 101.473 107.739 1.00 38.91 O
ATOM 9 C3' G A1018 53.243 100.272 107.304 1.00 38.37 C
ATOM 10 O3' G A1018 53.203 100.094 105.891 1.00 39.42 O
ATOM 11 C2' G A1018 53.563 101.730 107.610 1.00 38.72 C
ATOM 12 O2' G A1018 54.562 102.240 106.757 1.00 38.84 O
ATOM 13 C1' G A1018 52.217 102.384 107.302 1.00 39.21 C
ATOM 14 N9 G A1018 51.914 103.689 107.883 1.00 39.47 N
ATOM 15 C8 G A1018 52.581 104.367 108.875 1.00 40.25 C
ATOM 16 N7 G A1018 52.043 105.525 109.155 1.00 40.00 N
ATOM 17 C5 G A1018 50.956 105.614 108.300 1.00 40.52 C
ATOM 18 C6 G A1018 49.995 106.642 108.137 1.00 41.04 C
ATOM 19 O6 G A1018 49.899 107.713 108.743 1.00 41.80 O
ATOM 20 N1 G A1018 49.071 106.324 107.149 1.00 41.90 N
ATOM 21 C2 G A1018 49.064 105.162 106.417 1.00 42.34 C
ATOM 22 N2 G A1018 48.083 105.033 105.516 1.00 44.44 N
ATOM 23 N3 G A1018 49.950 104.197 106.560 1.00 41.51 N
ATOM 24 C4 G A1018 50.863 104.488 107.511 1.00 40.90 C
ATOM 25 P C A1019 53.972 98.863 105.203 1.00 42.51 P
ATOM 26 OP1 C A1019 53.473 98.744 103.809 1.00 43.61 O
ATOM 27 OP2 C A1019 53.899 97.681 106.099 1.00 43.06 O
ATOM 28 O5' C A1019 55.478 99.367 105.098 1.00 40.89 O
TER
ATOM 1 O3' G B2330 56.873 114.944 110.921 1.00 41.98 O
ATOM 2 P A B2331 56.804 113.743 111.980 1.00 42.75 P
ATOM 3 OP1 A B2331 55.776 114.077 113.011 1.00 39.99 O
ATOM 4 OP2 A B2331 58.193 113.428 112.390 1.00 42.79 O
ATOM 5 O5' A B2331 56.285 112.514 111.124 1.00 41.00 O
ATOM 6 C5' A B2331 54.927 112.445 110.711 1.00 40.99 C
ATOM 7 C4' A B2331 54.697 111.173 109.958 1.00 42.73 C
ATOM 8 O4' A B2331 55.519 111.168 108.764 1.00 42.28 O
ATOM 9 C3' A B2331 55.115 109.914 110.692 1.00 42.18 C
ATOM 10 O3' A B2331 54.110 109.514 111.604 1.00 40.95 O
ATOM 11 C2' A B2331 55.297 108.933 109.543 1.00 43.48 C
ATOM 12 O2' A B2331 54.063 108.444 109.043 1.00 46.11 O
ATOM 13 C1' A B2331 55.930 109.840 108.485 1.00 42.94 C
ATOM 14 N9 A B2331 57.391 109.801 108.482 1.00 42.06 N
ATOM 15 C8 A B2331 58.272 110.771 108.885 1.00 41.91 C
ATOM 16 N7 A B2331 59.529 110.437 108.733 1.00 42.10 N
ATOM 17 C5 A B2331 59.472 109.159 108.200 1.00 42.13 C
ATOM 18 C6 A B2331 60.470 108.255 107.804 1.00 43.30 C
ATOM 19 N6 A B2331 61.775 108.509 107.880 1.00 43.82 N
ATOM 20 N1 A B2331 60.075 107.062 107.314 1.00 43.61 N
ATOM 21 C2 A B2331 58.764 106.809 107.228 1.00 43.62 C
ATOM 22 N3 A B2331 57.734 107.579 107.563 1.00 42.05 N
ATOM 23 C4 A B2331 58.162 108.753 108.047 1.00 41.66 C
ATOM 24 P G B2332 54.517 108.761 112.952 1.00 41.14 P
ATOM 25 OP1 G B2332 53.285 108.703 113.776 1.00 39.87 O
ATOM 26 OP2 G B2332 55.738 109.385 113.504 1.00 40.65 O
ATOM 27 O5' G B2332 54.898 107.292 112.471 1.00 40.42 O
TER
Atoms:
OP1: (52.765,98.531,111.801)
OP2: (53.603,96.570,110.348)
C3': (53.243,100.272,107.304)
C1': (52.217,102.384,107.302)
C5': (51.672,99.673,109.247)
O6: (49.899,107.713,108.743)
O4': (51.238,101.473,107.739)
C8: (52.581,104.367,108.875)
C2: (49.064,105.162,106.417)
C6: (49.995,106.642,108.137)
C5: (50.956,105.614,108.300)
C4: (50.863,104.488,107.511)
P: (53.256,98.008,110.490)
C4': (51.817,100.146,107.828)
C2': (53.563,101.730,107.610)
O2': (54.562,102.240,106.757)
N1: (49.071,106.324,107.149)
N2: (48.083,105.033,105.516)
N3: (49.950,104.197,106.560)
N7: (52.043,105.525,109.155)
N9: (51.914,103.689,107.883)
O5': (52.174,98.344,109.376)
O3': (53.203,100.094,105.891)
OP2: (53.603,96.570,110.348)
C3': (53.243,100.272,107.304)
C1': (52.217,102.384,107.302)
C5': (51.672,99.673,109.247)
O6: (49.899,107.713,108.743)
O4': (51.238,101.473,107.739)
C8: (52.581,104.367,108.875)
C2: (49.064,105.162,106.417)
C6: (49.995,106.642,108.137)
C5: (50.956,105.614,108.300)
C4: (50.863,104.488,107.511)
P: (53.256,98.008,110.490)
C4': (51.817,100.146,107.828)
C2': (53.563,101.730,107.610)
O2': (54.562,102.240,106.757)
N1: (49.071,106.324,107.149)
N2: (48.083,105.033,105.516)
N3: (49.950,104.197,106.560)
N7: (52.043,105.525,109.155)
N9: (51.914,103.689,107.883)
O5': (52.174,98.344,109.376)
O3': (53.203,100.094,105.891)
OP1: (55.776,114.077,113.011)
OP2: (58.193,113.428,112.390)
C3': (55.115,109.914,110.692)
C1': (55.930,109.840,108.485)
C5': (54.927,112.445,110.711)
O4': (55.519,111.168,108.764)
C8: (58.272,110.771,108.885)
O2': (54.063,108.444,109.043)
C6: (60.470,108.255,107.804)
C5: (59.472,109.159,108.200)
C4: (58.162,108.753,108.047)
P: (56.804,113.743,111.980)
C4': (54.697,111.173,109.958)
C2': (55.297,108.933,109.543)
C2: (58.764,106.809,107.228)
N1: (60.075,107.062,107.314)
N3: (57.734,107.579,107.563)
N6: (61.775,108.509,107.880)
N7: (59.529,110.437,108.733)
N9: (57.391,109.801,108.482)
O5': (56.285,112.514,111.124)
O3': (54.110,109.514,111.604)
OP2: (58.193,113.428,112.390)
C3': (55.115,109.914,110.692)
C1': (55.930,109.840,108.485)
C5': (54.927,112.445,110.711)
O4': (55.519,111.168,108.764)
C8: (58.272,110.771,108.885)
O2': (54.063,108.444,109.043)
C6: (60.470,108.255,107.804)
C5: (59.472,109.159,108.200)
C4: (58.162,108.753,108.047)
P: (56.804,113.743,111.980)
C4': (54.697,111.173,109.958)
C2': (55.297,108.933,109.543)
C2: (58.764,106.809,107.228)
N1: (60.075,107.062,107.314)
N3: (57.734,107.579,107.563)
N6: (61.775,108.509,107.880)
N7: (59.529,110.437,108.733)
N9: (57.391,109.801,108.482)
O5': (56.285,112.514,111.124)
O3': (54.110,109.514,111.604)
Image (generated by PyMOL):