ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A314:A317

Extra

PDB:
ATOM 1 O3' U A 313 5.101 132.505 22.831 1.00 63.10 O
ATOM 2 P G A 314 5.938 131.187 22.410 1.00 62.31 P
ATOM 3 OP1 G A 314 5.837 131.025 20.932 1.00 63.37 O
ATOM 4 OP2 G A 314 5.558 130.058 23.296 1.00 62.30 O
ATOM 5 O5' G A 314 7.454 131.561 22.716 1.00 61.91 O
ATOM 6 C5' G A 314 8.166 132.534 21.913 1.00 59.71 C
ATOM 7 C4' G A 314 9.639 132.459 22.223 1.00 59.35 C
ATOM 8 O4' G A 314 9.795 132.712 23.644 1.00 59.41 O
ATOM 9 C3' G A 314 10.299 131.094 21.993 1.00 58.44 C
ATOM 10 O3' G A 314 10.827 130.967 20.662 1.00 59.32 O
ATOM 11 C2' G A 314 11.429 131.107 23.005 1.00 57.46 C
ATOM 12 O2' G A 314 12.520 131.859 22.528 1.00 55.76 O
ATOM 13 C1' G A 314 10.783 131.855 24.170 1.00 58.56 C
ATOM 14 N9 G A 314 10.178 130.971 25.162 1.00 59.74 N
ATOM 15 C8 G A 314 8.847 130.699 25.395 1.00 60.30 C
ATOM 16 N7 G A 314 8.663 129.845 26.365 1.00 60.27 N
ATOM 17 C5 G A 314 9.949 129.534 26.787 1.00 60.44 C
ATOM 18 C6 G A 314 10.403 128.669 27.804 1.00 60.04 C
ATOM 19 O6 G A 314 9.747 127.937 28.542 1.00 60.72 O
ATOM 20 N1 G A 314 11.788 128.704 27.922 1.00 59.83 N
ATOM 21 C2 G A 314 12.629 129.466 27.156 1.00 59.31 C
ATOM 22 N2 G A 314 13.925 129.417 27.459 1.00 58.58 N
ATOM 23 N3 G A 314 12.224 130.235 26.180 1.00 60.13 N
ATOM 24 C4 G A 314 10.884 130.233 26.059 1.00 60.34 C
ATOM 25 P A A 315 11.054 129.505 19.998 1.00 59.95 P
ATOM 26 OP1 A A 315 11.763 129.690 18.713 1.00 59.66 O
ATOM 27 OP2 A A 315 9.764 128.761 20.031 1.00 60.92 O
ATOM 28 O5' A A 315 12.122 128.790 20.927 1.00 60.05 O
TER

ATOM 1 O3' U B 316 19.205 124.728 21.896 1.00 59.89 O
ATOM 2 P A B 317 18.827 124.592 23.447 1.00 59.29 P
ATOM 3 OP1 A B 317 19.749 123.574 24.027 1.00 55.24 O
ATOM 4 OP2 A B 317 17.357 124.383 23.494 1.00 60.43 O
ATOM 5 O5' A B 317 19.140 126.021 24.082 1.00 56.17 O
ATOM 6 C5' A B 317 20.316 126.239 24.873 1.00 53.25 C
ATOM 7 C4' A B 317 20.300 127.634 25.443 1.00 52.56 C
ATOM 8 O4' A B 317 20.157 128.574 24.336 1.00 53.01 O
ATOM 9 C3' A B 317 19.144 127.923 26.400 1.00 52.45 C
ATOM 10 O3' A B 317 19.544 128.886 27.407 1.00 52.64 O
ATOM 11 C2' A B 317 18.117 128.531 25.441 1.00 52.14 C
ATOM 12 O2' A B 317 17.095 129.304 26.015 1.00 50.01 O
ATOM 13 C1' A B 317 19.021 129.380 24.553 1.00 53.75 C
ATOM 14 N9 A B 317 18.484 129.822 23.260 1.00 56.74 N
ATOM 15 C8 A B 317 17.777 129.097 22.326 1.00 58.39 C
ATOM 16 N7 A B 317 17.420 129.792 21.273 1.00 59.28 N
ATOM 17 C5 A B 317 17.930 131.059 21.521 1.00 59.33 C
ATOM 18 C6 A B 317 17.895 132.256 20.776 1.00 60.31 C
ATOM 19 N6 A B 317 17.310 132.376 19.580 1.00 60.06 N
ATOM 20 N1 A B 317 18.496 133.343 21.308 1.00 60.90 N
ATOM 21 C2 A B 317 19.100 133.227 22.499 1.00 60.29 C
ATOM 22 N3 A B 317 19.206 132.159 23.290 1.00 59.13 N
ATOM 23 C4 A B 317 18.592 131.093 22.738 1.00 58.60 C
ATOM 24 P C B 318 20.387 128.432 28.723 1.00 51.32 P
ATOM 25 OP1 C B 318 20.496 129.678 29.515 1.00 51.64 O
ATOM 26 OP2 C B 318 21.630 127.675 28.353 1.00 48.41 O
ATOM 27 O5' C B 318 19.461 127.432 29.555 1.00 51.23 O
TER

Atoms:
OP1: (5.837,131.025,20.932)
OP2: (5.558,130.058,23.296)
C3': (10.299,131.094,21.993)
C1': (10.783,131.855,24.170)
C5': (8.166,132.534,21.913)
O6: (9.747,127.937,28.542)
O4': (9.795,132.712,23.644)
C8: (8.847,130.699,25.395)
C2: (12.629,129.466,27.156)
C6: (10.403,128.669,27.804)
C5: (9.949,129.534,26.787)
C4: (10.884,130.233,26.059)
P: (5.938,131.187,22.410)
C4': (9.639,132.459,22.223)
C2': (11.429,131.107,23.005)
O2': (12.520,131.859,22.528)
N1: (11.788,128.704,27.922)
N2: (13.925,129.417,27.459)
N3: (12.224,130.235,26.180)
N7: (8.663,129.845,26.365)
N9: (10.178,130.971,25.162)
O5': (7.454,131.561,22.716)
O3': (10.827,130.967,20.662)
OP1: (19.749,123.574,24.027)
OP2: (17.357,124.383,23.494)
C3': (19.144,127.923,26.400)
C1': (19.021,129.380,24.553)
C5': (20.316,126.239,24.873)
O4': (20.157,128.574,24.336)
C8: (17.777,129.097,22.326)
O2': (17.095,129.304,26.015)
C6: (17.895,132.256,20.776)
C5: (17.930,131.059,21.521)
C4: (18.592,131.093,22.738)
P: (18.827,124.592,23.447)
C4': (20.300,127.634,25.443)
C2': (18.117,128.531,25.441)
C2: (19.100,133.227,22.499)
N1: (18.496,133.343,21.308)
N3: (19.206,132.159,23.290)
N6: (17.310,132.376,19.580)
N7: (17.420,129.792,21.273)
N9: (18.484,129.822,23.260)
O5': (19.140,126.021,24.082)
O3': (19.544,128.886,27.407)
Image (generated by PyMOL):
PyMOL image
show in jmol