ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:0314:0317

Extra

PDB:
ATOM 1 O3' U A 313 4.759 132.716 22.260 1.00 70.17 O
ATOM 2 P G A 314 5.498 131.387 21.747 1.00 68.41 P
ATOM 3 OP1 G A 314 5.363 131.321 20.273 1.00 70.46 O
ATOM 4 OP2 G A 314 5.019 130.264 22.577 1.00 69.18 O
ATOM 5 O5' G A 314 7.038 131.635 22.069 1.00 69.48 O
ATOM 6 C5' G A 314 7.796 132.643 21.360 1.00 66.06 C
ATOM 7 C4' G A 314 9.255 132.576 21.751 1.00 63.32 C
ATOM 8 O4' G A 314 9.377 132.795 23.178 1.00 63.27 O
ATOM 9 C3' G A 314 9.933 131.238 21.517 1.00 62.65 C
ATOM 10 O3' G A 314 10.399 131.133 20.182 1.00 61.26 O
ATOM 11 C2' G A 314 11.078 131.275 22.517 1.00 62.89 C
ATOM 12 O2' G A 314 12.169 132.056 22.085 1.00 61.75 O
ATOM 13 C1' G A 314 10.416 131.982 23.697 1.00 64.50 C
ATOM 14 N9 G A 314 9.847 131.058 24.676 1.00 67.28 N
ATOM 15 C8 G A 314 8.520 130.758 24.874 1.00 67.95 C
ATOM 16 N7 G A 314 8.327 129.904 25.841 1.00 68.73 N
ATOM 17 C5 G A 314 9.603 129.617 26.308 1.00 69.55 C
ATOM 18 C6 G A 314 10.032 128.757 27.355 1.00 69.79 C
ATOM 19 O6 G A 314 9.346 128.048 28.095 1.00 70.79 O
ATOM 20 N1 G A 314 11.416 128.773 27.496 1.00 69.28 N
ATOM 21 C2 G A 314 12.279 129.515 26.733 1.00 68.26 C
ATOM 22 N2 G A 314 13.577 129.401 27.025 1.00 67.69 N
ATOM 23 N3 G A 314 11.897 130.312 25.755 1.00 69.34 N
ATOM 24 C4 G A 314 10.553 130.317 25.599 1.00 69.00 C
ATOM 25 P A A 315 10.675 129.688 19.541 1.00 62.39 P
ATOM 26 OP1 A A 315 11.339 129.893 18.228 1.00 61.22 O
ATOM 27 OP2 A A 315 9.423 128.900 19.628 1.00 63.02 O
ATOM 28 O5' A A 315 11.746 129.010 20.503 1.00 65.45 O
TER

ATOM 1 O3' U B 316 18.929 124.813 21.445 1.00 61.13 O
ATOM 2 P A B 317 18.381 124.672 22.953 1.00 59.50 P
ATOM 3 OP1 A B 317 19.183 123.603 23.595 1.00 59.06 O
ATOM 4 OP2 A B 317 16.902 124.545 22.896 1.00 60.85 O
ATOM 5 O5' A B 317 18.682 126.076 23.654 1.00 60.22 O
ATOM 6 C5' A B 317 19.882 126.287 24.434 1.00 58.19 C
ATOM 7 C4' A B 317 19.888 127.674 25.046 1.00 56.91 C
ATOM 8 O4' A B 317 19.816 128.665 23.985 1.00 57.66 O
ATOM 9 C3' A B 317 18.744 128.003 26.002 1.00 56.24 C
ATOM 10 O3' A B 317 19.153 129.013 26.938 1.00 57.48 O
ATOM 11 C2' A B 317 17.750 128.684 25.075 1.00 56.57 C
ATOM 12 O2' A B 317 16.879 129.536 25.780 1.00 54.94 O
ATOM 13 C1' A B 317 18.700 129.500 24.202 1.00 58.98 C
ATOM 14 N9 A B 317 18.181 129.937 22.907 1.00 63.03 N
ATOM 15 C8 A B 317 17.419 129.246 21.994 1.00 64.12 C
ATOM 16 N7 A B 317 17.111 129.944 20.928 1.00 65.57 N
ATOM 17 C5 A B 317 17.712 131.176 21.152 1.00 66.72 C
ATOM 18 C6 A B 317 17.759 132.362 20.395 1.00 66.01 C
ATOM 19 N6 A B 317 17.166 132.511 19.212 1.00 66.26 N
ATOM 20 N1 A B 317 18.448 133.406 20.905 1.00 66.61 N
ATOM 21 C2 A B 317 19.044 133.262 22.091 1.00 66.74 C
ATOM 22 N3 A B 317 19.071 132.204 22.896 1.00 67.23 N
ATOM 23 C4 A B 317 18.378 131.183 22.363 1.00 65.94 C
ATOM 24 P C B 318 19.985 128.624 28.260 1.00 54.76 P
ATOM 25 OP1 C B 318 19.965 129.819 29.133 1.00 51.40 O
ATOM 26 OP2 C B 318 21.287 128.035 27.830 1.00 51.08 O
ATOM 27 O5' C B 318 19.120 127.502 28.989 1.00 55.87 O
TER

Atoms:
OP1: (5.363,131.321,20.273)
OP2: (5.019,130.264,22.577)
C3': (9.933,131.238,21.517)
C1': (10.416,131.982,23.697)
C5': (7.796,132.643,21.360)
O6: (9.346,128.048,28.095)
O4': (9.377,132.795,23.178)
C8: (8.520,130.758,24.874)
C2: (12.279,129.515,26.733)
C6: (10.032,128.757,27.355)
C5: (9.603,129.617,26.308)
C4: (10.553,130.317,25.599)
P: (5.498,131.387,21.747)
C4': (9.255,132.576,21.751)
C2': (11.078,131.275,22.517)
O2': (12.169,132.056,22.085)
N1: (11.416,128.773,27.496)
N2: (13.577,129.401,27.025)
N3: (11.897,130.312,25.755)
N7: (8.327,129.904,25.841)
N9: (9.847,131.058,24.676)
O5': (7.038,131.635,22.069)
O3': (10.399,131.133,20.182)
OP1: (19.183,123.603,23.595)
OP2: (16.902,124.545,22.896)
C3': (18.744,128.003,26.002)
C1': (18.700,129.500,24.202)
C5': (19.882,126.287,24.434)
O4': (19.816,128.665,23.985)
C8: (17.419,129.246,21.994)
O2': (16.879,129.536,25.780)
C6: (17.759,132.362,20.395)
C5: (17.712,131.176,21.152)
C4: (18.378,131.183,22.363)
P: (18.381,124.672,22.953)
C4': (19.888,127.674,25.046)
C2': (17.750,128.684,25.075)
C2: (19.044,133.262,22.091)
N1: (18.448,133.406,20.905)
N3: (19.071,132.204,22.896)
N6: (17.166,132.511,19.212)
N7: (17.111,129.944,20.928)
N9: (18.181,129.937,22.907)
O5': (18.682,126.076,23.654)
O3': (19.153,129.013,26.938)
Image (generated by PyMOL):
PyMOL image
show in jmol