ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:0314:0317

Extra

PDB:
ATOM 1 O3' U A 313 4.377 132.082 22.564 1.00 49.98 O
ATOM 2 P G A 314 5.039 130.751 21.946 1.00 48.75 P
ATOM 3 OP1 G A 314 4.871 130.797 20.475 1.00 52.98 O
ATOM 4 OP2 G A 314 4.544 129.574 22.700 1.00 50.41 O
ATOM 5 O5' G A 314 6.594 130.898 22.261 1.00 50.62 O
ATOM 6 C5' G A 314 7.401 131.876 21.577 1.00 47.62 C
ATOM 7 C4' G A 314 8.849 131.735 21.981 1.00 46.73 C
ATOM 8 O4' G A 314 8.976 131.946 23.414 1.00 47.27 O
ATOM 9 C3' G A 314 9.481 130.373 21.746 1.00 45.91 C
ATOM 10 O3' G A 314 9.936 130.264 20.402 1.00 46.62 O
ATOM 11 C2' G A 314 10.638 130.390 22.738 1.00 45.10 C
ATOM 12 O2' G A 314 11.720 131.165 22.279 1.00 44.57 O
ATOM 13 C1' G A 314 10.011 131.123 23.925 1.00 46.21 C
ATOM 14 N9 G A 314 9.445 130.233 24.938 1.00 48.44 N
ATOM 15 C8 G A 314 8.114 129.993 25.183 1.00 48.17 C
ATOM 16 N7 G A 314 7.917 129.160 26.166 1.00 48.74 N
ATOM 17 C5 G A 314 9.194 128.823 26.595 1.00 49.57 C
ATOM 18 C6 G A 314 9.616 127.951 27.638 1.00 50.49 C
ATOM 19 O6 G A 314 8.918 127.276 28.411 1.00 49.68 O
ATOM 20 N1 G A 314 11.006 127.905 27.734 1.00 50.13 N
ATOM 21 C2 G A 314 11.878 128.597 26.931 1.00 49.46 C
ATOM 22 N2 G A 314 13.190 128.409 27.174 1.00 47.97 N
ATOM 23 N3 G A 314 11.496 129.409 25.958 1.00 48.93 N
ATOM 24 C4 G A 314 10.149 129.474 25.848 1.00 48.14 C
ATOM 25 P A A 315 10.279 128.819 19.776 1.00 49.02 P
ATOM 26 OP1 A A 315 10.916 129.041 18.450 1.00 47.09 O
ATOM 27 OP2 A A 315 9.067 127.967 19.878 1.00 49.39 O
ATOM 28 O5' A A 315 11.375 128.197 20.751 1.00 49.46 O
TER

ATOM 1 O3' U B 316 18.489 124.068 21.803 1.00 47.17 O
ATOM 2 P A B 317 18.034 123.985 23.350 1.00 45.48 P
ATOM 3 OP1 A B 317 18.901 122.943 23.968 1.00 46.97 O
ATOM 4 OP2 A B 317 16.556 123.838 23.412 1.00 43.32 O
ATOM 5 O5' A B 317 18.383 125.422 23.964 1.00 46.52 O
ATOM 6 C5' A B 317 19.577 125.641 24.765 1.00 44.81 C
ATOM 7 C4' A B 317 19.551 127.026 25.391 1.00 43.79 C
ATOM 8 O4' A B 317 19.461 128.021 24.332 1.00 46.44 O
ATOM 9 C3' A B 317 18.385 127.323 26.334 1.00 42.72 C
ATOM 10 O3' A B 317 18.755 128.358 27.257 1.00 42.63 O
ATOM 11 C2' A B 317 17.371 127.947 25.387 1.00 43.47 C
ATOM 12 O2' A B 317 16.415 128.748 26.054 1.00 40.61 O
ATOM 13 C1' A B 317 18.295 128.797 24.514 1.00 45.37 C
ATOM 14 N9 A B 317 17.779 129.177 23.198 1.00 48.47 N
ATOM 15 C8 A B 317 17.034 128.434 22.312 1.00 48.01 C
ATOM 16 N7 A B 317 16.719 129.080 21.216 1.00 48.66 N
ATOM 17 C5 A B 317 17.299 130.329 21.386 1.00 49.75 C
ATOM 18 C6 A B 317 17.334 131.478 20.570 1.00 50.45 C
ATOM 19 N6 A B 317 16.746 131.558 19.373 1.00 49.05 N
ATOM 20 N1 A B 317 18.002 132.556 21.034 1.00 50.10 N
ATOM 21 C2 A B 317 18.592 132.479 22.232 1.00 50.91 C
ATOM 22 N3 A B 317 18.631 131.460 23.089 1.00 51.10 N
ATOM 23 C4 A B 317 17.957 130.402 22.600 1.00 50.09 C
ATOM 24 P C B 318 19.584 128.012 28.596 1.00 40.90 P
ATOM 25 OP1 C B 318 19.543 129.253 29.413 1.00 38.87 O
ATOM 26 OP2 C B 318 20.901 127.411 28.233 1.00 35.99 O
ATOM 27 O5' C B 318 18.714 126.897 29.335 1.00 40.44 O
TER

Atoms:
OP1: (4.871,130.797,20.475)
OP2: (4.544,129.574,22.700)
C3': (9.481,130.373,21.746)
C1': (10.011,131.123,23.925)
C5': (7.401,131.876,21.577)
O6: (8.918,127.276,28.411)
O4': (8.976,131.946,23.414)
C8: (8.114,129.993,25.183)
C2: (11.878,128.597,26.931)
C6: (9.616,127.951,27.638)
C5: (9.194,128.823,26.595)
C4: (10.149,129.474,25.848)
P: (5.039,130.751,21.946)
C4': (8.849,131.735,21.981)
C2': (10.638,130.390,22.738)
O2': (11.720,131.165,22.279)
N1: (11.006,127.905,27.734)
N2: (13.190,128.409,27.174)
N3: (11.496,129.409,25.958)
N7: (7.917,129.160,26.166)
N9: (9.445,130.233,24.938)
O5': (6.594,130.898,22.261)
O3': (9.936,130.264,20.402)
OP1: (18.901,122.943,23.968)
OP2: (16.556,123.838,23.412)
C3': (18.385,127.323,26.334)
C1': (18.295,128.797,24.514)
C5': (19.577,125.641,24.765)
O4': (19.461,128.021,24.332)
C8: (17.034,128.434,22.312)
O2': (16.415,128.748,26.054)
C6: (17.334,131.478,20.570)
C5: (17.299,130.329,21.386)
C4: (17.957,130.402,22.600)
P: (18.034,123.985,23.350)
C4': (19.551,127.026,25.391)
C2': (17.371,127.947,25.387)
C2: (18.592,132.479,22.232)
N1: (18.002,132.556,21.034)
N3: (18.631,131.460,23.089)
N6: (16.746,131.558,19.373)
N7: (16.719,129.080,21.216)
N9: (17.779,129.177,23.198)
O5': (18.383,125.422,23.964)
O3': (18.755,128.358,27.257)
Image (generated by PyMOL):
PyMOL image
show in jmol