ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0314:0317

Extra

PDB:
ATOM 1 O3' U A 313 4.504 132.152 22.538 1.00 50.27 O
ATOM 2 P G A 314 5.148 130.814 21.907 1.00 50.00 P
ATOM 3 OP1 G A 314 4.950 130.860 20.433 1.00 51.83 O
ATOM 4 OP2 G A 314 4.652 129.638 22.666 1.00 49.29 O
ATOM 5 O5' G A 314 6.712 130.956 22.191 1.00 48.00 O
ATOM 6 C5' G A 314 7.507 131.949 21.515 1.00 45.74 C
ATOM 7 C4' G A 314 8.964 131.821 21.907 1.00 45.86 C
ATOM 8 O4' G A 314 9.106 132.030 23.338 1.00 46.08 O
ATOM 9 C3' G A 314 9.613 130.469 21.652 1.00 45.10 C
ATOM 10 O3' G A 314 10.070 130.388 20.306 1.00 45.76 O
ATOM 11 C2' G A 314 10.768 130.478 22.646 1.00 45.66 C
ATOM 12 O2' G A 314 11.862 131.253 22.207 1.00 45.58 O
ATOM 13 C1' G A 314 10.139 131.198 23.839 1.00 46.86 C
ATOM 14 N9 G A 314 9.570 130.303 24.846 1.00 48.86 N
ATOM 15 C8 G A 314 8.238 130.044 25.063 1.00 48.77 C
ATOM 16 N7 G A 314 8.030 129.219 26.050 1.00 49.58 N
ATOM 17 C5 G A 314 9.302 128.906 26.513 1.00 51.05 C
ATOM 18 C6 G A 314 9.711 128.057 27.581 1.00 52.31 C
ATOM 19 O6 G A 314 9.002 127.388 28.351 1.00 53.39 O
ATOM 20 N1 G A 314 11.099 128.029 27.711 1.00 51.45 N
ATOM 21 C2 G A 314 11.981 128.720 26.916 1.00 50.50 C
ATOM 22 N2 G A 314 13.285 128.546 27.190 1.00 49.74 N
ATOM 23 N3 G A 314 11.612 129.517 25.922 1.00 50.78 N
ATOM 24 C4 G A 314 10.266 129.562 25.778 1.00 49.88 C
ATOM 25 P A A 315 10.403 128.954 19.648 1.00 47.75 P
ATOM 26 OP1 A A 315 11.049 129.201 18.330 1.00 44.76 O
ATOM 27 OP2 A A 315 9.184 128.102 19.730 1.00 47.50 O
ATOM 28 O5' A A 315 11.501 128.311 20.605 1.00 48.63 O
TER

ATOM 1 O3' U B 316 18.583 124.063 21.704 1.00 46.12 O
ATOM 2 P A B 317 18.148 124.008 23.259 1.00 46.51 P
ATOM 3 OP1 A B 317 19.052 122.996 23.886 1.00 45.60 O
ATOM 4 OP2 A B 317 16.674 123.840 23.354 1.00 44.68 O
ATOM 5 O5' A B 317 18.484 125.458 23.843 1.00 46.48 O
ATOM 6 C5' A B 317 19.677 125.690 24.640 1.00 44.79 C
ATOM 7 C4' A B 317 19.651 127.079 25.251 1.00 43.05 C
ATOM 8 O4' A B 317 19.556 128.058 24.181 1.00 44.71 O
ATOM 9 C3' A B 317 18.489 127.382 26.195 1.00 42.03 C
ATOM 10 O3' A B 317 18.867 128.406 27.122 1.00 42.02 O
ATOM 11 C2' A B 317 17.476 128.018 25.253 1.00 42.67 C
ATOM 12 O2' A B 317 16.547 128.833 25.938 1.00 41.46 O
ATOM 13 C1' A B 317 18.406 128.857 24.378 1.00 44.20 C
ATOM 14 N9 A B 317 17.899 129.272 23.068 1.00 46.07 N
ATOM 15 C8 A B 317 17.170 128.555 22.150 1.00 45.57 C
ATOM 16 N7 A B 317 16.889 129.226 21.060 1.00 46.73 N
ATOM 17 C5 A B 317 17.468 130.470 21.274 1.00 48.06 C
ATOM 18 C6 A B 317 17.531 131.637 20.486 1.00 48.63 C
ATOM 19 N6 A B 317 16.982 131.745 19.274 1.00 48.28 N
ATOM 20 N1 A B 317 18.188 132.704 20.994 1.00 48.62 N
ATOM 21 C2 A B 317 18.742 132.597 22.207 1.00 48.94 C
ATOM 22 N3 A B 317 18.753 131.557 23.040 1.00 48.56 N
ATOM 23 C4 A B 317 18.091 130.512 22.507 1.00 47.59 C
ATOM 24 P C B 318 19.665 128.040 28.475 1.00 42.50 P
ATOM 25 OP1 C B 318 19.650 129.287 29.284 1.00 40.00 O
ATOM 26 OP2 C B 318 20.972 127.394 28.131 1.00 38.06 O
ATOM 27 O5' C B 318 18.763 126.947 29.208 1.00 42.24 O
TER

Atoms:
OP1: (4.950,130.860,20.433)
OP2: (4.652,129.638,22.666)
C3': (9.613,130.469,21.652)
C1': (10.139,131.198,23.839)
C5': (7.507,131.949,21.515)
O6: (9.002,127.388,28.351)
O4': (9.106,132.030,23.338)
C8: (8.238,130.044,25.063)
C2: (11.981,128.720,26.916)
C6: (9.711,128.057,27.581)
C5: (9.302,128.906,26.513)
C4: (10.266,129.562,25.778)
P: (5.148,130.814,21.907)
C4': (8.964,131.821,21.907)
C2': (10.768,130.478,22.646)
O2': (11.862,131.253,22.207)
N1: (11.099,128.029,27.711)
N2: (13.285,128.546,27.190)
N3: (11.612,129.517,25.922)
N7: (8.030,129.219,26.050)
N9: (9.570,130.303,24.846)
O5': (6.712,130.956,22.191)
O3': (10.070,130.388,20.306)
OP1: (19.052,122.996,23.886)
OP2: (16.674,123.840,23.354)
C3': (18.489,127.382,26.195)
C1': (18.406,128.857,24.378)
C5': (19.677,125.690,24.640)
O4': (19.556,128.058,24.181)
C8: (17.170,128.555,22.150)
O2': (16.547,128.833,25.938)
C6: (17.531,131.637,20.486)
C5: (17.468,130.470,21.274)
C4: (18.091,130.512,22.507)
P: (18.148,124.008,23.259)
C4': (19.651,127.079,25.251)
C2': (17.476,128.018,25.253)
C2: (18.742,132.597,22.207)
N1: (18.188,132.704,20.994)
N3: (18.753,131.557,23.040)
N6: (16.982,131.745,19.274)
N7: (16.889,129.226,21.060)
N9: (17.899,129.272,23.068)
O5': (18.484,125.458,23.843)
O3': (18.867,128.406,27.122)
Image (generated by PyMOL):
PyMOL image
show in jmol